FC923648

Overview
NameFC923648
Unique NameFC923648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.275e-28
Identity = 75/193 (38.86%), Postives = 108/193 (55.96%), Query Frame = 1
Query:  166 WDLYER-WRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS-IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            WDL+++ +R  +  +  +DE  +R  ++++N+ H+   N         Y+L +N   DMT+ E      G K+        +R N T       S  P SVD+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC    N GC GG M  AF++++K  G+ +E  YPY   D +C
Sbjct:   27 WDLWKKTYRKQY--NSKVDELSRRL-IWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSH----SRSNDTLYIPDWESRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESC 211          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.275e-28
Identity = 71/186 (38.17%), Postives = 101/186 (54.30%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTA-VKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            +  W   H  + S  E   R  VF  N   +   N+ +  +K+ LN+F+DM+  E    Y  S+ ++    +     GT  Y      PSS+DWRKKG+V + VK+QG CGSCW FST  A+E    I + K+++L+EQ+LVDC  + +N GC GGL   AFE+I    G+  E  YPY   +G C
Sbjct:   33 FTSWMKQHQKTYSSREYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPY------PSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQC 212          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.666e-28
Identity = 69/195 (35.38%), Postives = 108/195 (55.38%), Query Frame = 1
Query:  169 DLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSI-------PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDV 732
            D   ++  H++   S  EK +RF +F+ N+  +   N+ D   + ++NKF+D++  E  S Y G  +             T  + +V  +       P   DWR+   VT+VK+QG CG+CWAF+T+A++E    I  N+L++LSEQ+L+DC +  + GCNGGL+  A+E + + GGV  E  YPY   DG C V
Sbjct:   30 DFLHKFNKHYS---SESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQ----------TQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY-VDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNCRV 210          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.175e-28
Identity = 77/206 (37.38%), Postives = 115/206 (55.83%), Query Frame = 1
Query:  136 EKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK--------PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS-IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            E EL+++   WDL++R     T+ +++  +  R NV + ++    + ++  +         ++L +N   DMT+ E   T  G ++   R     R NGT      +S  P++VDWR+KG VT VKDQGQCGSCWAFS++ A+EG     T KL+SLS Q LV C   +N GC GG M  AFE+++   G+ +E  YPY   D +C
Sbjct:   24 EPELDAQ---WDLWKR-----TIQKAVQRQGGR-NVPEVDLGEEPEVHRCPQRGARLGKHSFQLAMNYLGDMTSEEVVRTMTGLRVPRSR----PRPNGTLYVPDWSSRAPAAVDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYCVS-NNNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQDESC 215          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.841e-28
Identity = 63/176 (35.80%), Postives = 98/176 (55.68%), Query Frame = 1
Query:  223 KHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAG-SKIKHHRMFQGTRGNGTFMYGKVT-----SIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDV 732
            K+ RF +FKQN+  +++ NK++      +NKF+D++ +E  + Y G +  K   M + T      ++          +P + DWR    +T+VKDQG CGSCWA + +  +E +  I  N L++LSEQ+L+DC   +N  C+GGLM  AFE +   GG+  E  YPY    G C +
Sbjct:   49 KNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLTSKKPSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCDS-ANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTKGVCKI 223          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.841e-28
Identity = 76/209 (36.36%), Postives = 115/209 (55.02%), Query Frame = 1
Query:  115 VEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGT-FMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            V  F  H +E+   +  W+L+++  S    S+ +DE  +R  ++++N+ H+   N         Y+L +N   DMT+ E      G K+   R    +  N T ++       P S+D+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC    N GC GG M  AF+++++  G+ +E  YPY   D +C
Sbjct:   11 VVSFALHPEEILDTQ--WELWKKTYSKQYNSK-VDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSR----SHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESC 210          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.711e-28
Identity = 72/204 (35.29%), Postives = 107/204 (52.45%), Query Frame = 1
Query:  127 DFHEKELESEEGLWDLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTN---KMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            D    +  +++ +  L++ W+S H  V  + +E+ KR  +FK N  ++   N   K    ++L LNKFAD+T  EF+  Y  +     +  +                P+S DWRKKG +T VK QG CG  WAFS   A+E  + I T  LVSLSEQELVDC    ++G   G    +FE++ + GG+ T+  YPY + +G C
Sbjct:   28 DLDLTKFTTQKQVSSLFQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQAPKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVE-ESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEGRC 230          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.846e-28
Identity = 55/100 (55.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query:  436 IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDVS 735
            +P  +DWRKKG+VT VK+QG CGSCWAFST++ VE IN I T  L+SLSEQELVDC    N GC GG    A+++I   GG+ T+A YPY +  G C  +
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK-KNHGCLGGAFVFAYQYIINNGGIDTQANYPYKAVQGPCQAA 99          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.846e-28
Identity = 76/200 (38.00%), Postives = 108/200 (54.00%), Query Frame = 1
Query:  145 LESEEGLWDLYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGT-FMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            L  EE L   +E W+ ++     S  ++  R  ++++N+ H+   N         Y+L +N   DMT+ E      G K+   R    +R N T ++       P SVD+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC    N GC GG M  AF++++K  G+ +E  YPY   D  C
Sbjct:   16 LYPEEILDTQWELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPASR----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENC 210          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.846e-28
Identity = 69/186 (37.10%), Postives = 101/186 (54.30%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTA-VKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH-*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            ++ W   H  + S  E + R  +F  N   +   N+ +  +K+ LN+F+DM+  E    +  S+ ++    +     GT  Y      PSS+DWRKKG+V + VK+QG C SCW FST  A+E    I + K++SL+EQ+LVDC    +N GC GGL   AFE+I    G+  E  YPY   D +C
Sbjct:   33 FKSWMKQHQKTYSSVEYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWSEPQNCSATKSNYLRGTGPY------PSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSC 212          
The following BLAST results are available for this feature:
BLAST of FC923648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CATK_CANFA1.275e-2838.86Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATH_RAT1.275e-2838.17Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATV_NPVHC1.666e-2835.38Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CATK_CHICK2.175e-2837.38Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
CATV_NPVAH2.841e-2835.80Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATK_RABIT2.841e-2836.36Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
P34_SOYBN3.711e-2835.29P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
ERVC_TABDI4.846e-2855.00Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATK_BOVIN4.846e-2838.00Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CATH_MOUSE4.846e-2837.10Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31707E01EF StrClemenN Citrus clementina cDNA clone C31707E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923648 ID=FC923648; Name=FC923648; organism=Citrus clementina; type=EST; length=735bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGNACACTGATCAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAACAACAGAGGCTAAGTACC
CTTACCNAAGCTATGATGGAACATGTGACGTTTCA
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