FC923648

Overview
NameFC923648
Unique NameFC923648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.329e-28
Identity = 57/98 (58.16%), Postives = 70/98 (71.43%), Query Frame = 1
Query:  436 IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCD 729
            +P S+DWR+KG+V  VK+QG CGSCWAF  IAAVEGIN I+T  L+SLSEQ+LVDC    N GC GG    AF++I   GG+ +E  YPY   +GTCD
Sbjct:    3 LPDSIDWREKGAVVPVKNQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDCST-RNHGCEGGWPYRAFQYIINNGGINSEEHYPYTGTNGTCD 99          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.329e-28
Identity = 65/182 (35.71%), Postives = 101/182 (55.49%), Query Frame = 1
Query:  211 SLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSI-------PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDVS 735
            S  EK  RF +F+ N+  +   N+ D   + ++NKF+D++  E  S Y G  + H           T  + +V  +       P   DWR+   VT+VK+QG CG+CWAF+T+ ++E    I  N+L++LSEQ+ +DC    N GC+GGL+  AFE   + GGV  E+ YPY + +G C ++
Sbjct:   41 SESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDLSKEEAISKYTGLSLPHQ----------TQNFCEVVILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR-VNAGCDGGLLHTAFESAMEMGGVQMESDYPYETANGQCRIN 211          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 6.329e-28
Identity = 75/196 (38.27%), Postives = 108/196 (55.10%), Query Frame = 1
Query:  166 WDLYERWRSHHTVSRSLDEKHK---RFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC--XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            WDL+++     T  +   EK++   R  ++++N+    +H  + +     Y+L +N   DMT+ E  S  +  ++      Q  R N T+       +P S+DWR+KG VT VK QG CGSCWAFS + A+E    + T KLVSLS Q LVDC      N+GCNGG M  AF++I    G+ +EA YPY + DG C
Sbjct:   28 WDLWKK-----TYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISLMSSLRVPS----QWPR-NVTYKSDPNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKC 213          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.266e-28
Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = 1
Query:  436 IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            +PS VDWR KG+V ++K+Q QCGSCWAFS +AAVE IN I T +L+SLSEQELVDC   ++ GCNGG M  AF++I   GG+ T+  YPY +  G+C
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDT-ASHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQGSC 96          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.266e-28
Identity = 69/194 (35.57%), Postives = 106/194 (54.64%), Query Frame = 1
Query:  166 WDLYERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH---*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            WDL+++  +H    +  +E+  R  ++++N+    +H  + +     Y++ +N   DMTN E +      +I        +    TF      ++P +VDWR+KG VT VK QG CG+CWAFS + A+EG   + T KL+SLS Q LVDC +     N+GC GG M  AF++I   GG+  +A YPY + D  C
Sbjct:   36 WDLWKK--THEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEISCRMGALRISRQ-----SPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKC 222          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.266e-28
Identity = 76/201 (37.81%), Postives = 109/201 (54.23%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGT-FMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            L  EE L   +E W+  H    +  +DE  +R  ++++N+ ++   N         Y+L +N   DMTN E      G K+        +R N T ++       P SVD+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC    N GC GG M  AF++++K  G+ +E  YPY   + +C
Sbjct:   16 LYPEEILDTHWELWKKTHRKQYNSKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASH----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC 210          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.266e-28
Identity = 76/201 (37.81%), Postives = 109/201 (54.23%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGT-FMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            L  EE L   +E W+  H    +  +DE  +R  ++++N+ ++   N         Y+L +N   DMTN E      G K+        +R N T ++       P SVD+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC    N GC GG M  AF++++K  G+ +E  YPY   + +C
Sbjct:   16 LYPEEILDTHWELWKKTHRKQYNSKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASH----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC 210          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.410e-27
Identity = 80/207 (38.65%), Postives = 109/207 (52.66%), Query Frame = 1
Query:  139 KELESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQ--TNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDW--RKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAK-YPYXSYDGTCDVS 735
            +E+  E    +LY  W+  +    +   DE + R+ VF  N+ ++     +  +  + L+LN+FADM+  EFA TY   K+   R  +    N  F Y       + VDW   KK    AVK+QG CGSCWAFS + A+E    I  N+   LSEQ+LVDC     N GCNGG M+ AFE++   G    EAK YPY + DGTC  S
Sbjct:   14 QEVSDEIDTANLYANWKMKYNRRYTNQRDEMY-RYKVFTDNLNYIRAFYESPEEATFTLELNQFADMSQQEFAQTYLSLKVP--RTAKLNAANSNFQYKG-----AEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYDNDGCNGGWMDSAFEYVADNG--LAEAKDYPYTAKDGTCKTS 210          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.410e-27
Identity = 75/201 (37.31%), Postives = 108/201 (53.73%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGT-FMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            L  EE L   +E W+  +    +  +DE  +R  ++++N+ H+   N         Y+L +N   DMT+ E      G K+        +R N T ++       P S+D+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC    N GC GG M  AF++++K  G+ +E  YPY   D  C
Sbjct:   17 LYPEEILDTQWELWKKTYRKQYNSKVDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSH----SRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENC 211          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.410e-27
Identity = 75/201 (37.31%), Postives = 108/201 (53.73%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS-IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            L  EE L   +E W+  H    +  +DE  +R  ++++N+ ++   N         Y+L +N   DMT+ E      G K+        +R N T    +     P SVD+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC    N GC GG M  AF++++K  G+ +E  YPY   + +C
Sbjct:   16 LYPEEILDTHWELWKKTHRKQYNNKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVP----LSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC 210          
The following BLAST results are available for this feature:
BLAST of FC923648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CPGP1_ZINOF6.329e-2858.16Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CATV_NPVOP6.329e-2835.71Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATS_BOVIN6.329e-2838.27Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
ERVB_TABDI8.266e-2857.73Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATS_MOUSE8.266e-2835.57Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATK_MACMU8.266e-2837.81Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA8.266e-2837.81Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATL1_PARTE1.410e-2738.65Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATK_PIG1.410e-2737.31Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATK_HUMAN1.410e-2737.31Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31707E01EF StrClemenN Citrus clementina cDNA clone C31707E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923648 ID=FC923648; Name=FC923648; organism=Citrus clementina; type=EST; length=735bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGNACACTGATCAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAACAACAGAGGCTAAGTACC
CTTACCNAAGCTATGATGGAACATGTGACGTTTCA
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