FC923655

Overview
NameFC923655
Unique NameFC923655
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923655 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.985e-34
Identity = 79/196 (40.31%), Postives = 110/196 (56.12%), Query Frame = 1
Query:  127 DVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANG---AEAKKAAXXXXXXXXXXXXDAFVKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNXVKLLDEVKTPWTVQWAER 705
            +V +L  W S + MRARIAL  K V YE+ EENL ++S LLL+ NP+HKKIPVLIHN KP+CES IIV+Y+DE W+   P ++PSDPY R+ ARFW  Y+D+K +   + +  + G    E KK              D        K F+G +  GF+D+   ++  W    E     K+  E + P  + W +R
Sbjct:    4 EVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSP-LMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTD--------KPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKM--EEECPKLMAWVKR 188          
BLAST of FC923655 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.542e-34
Identity = 83/207 (40.10%), Postives = 122/207 (58.94%), Query Frame = 1
Query:  130 VKVLGFWPSPFLMRARIALKIKSVEYEFLEENLG-SKSELLLKSNPVHKKIPVLIHND-KPVCESLIIVEYVDEAWSSSGPS-----ILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKAFFGGNQI--GFLDIAFGSYLGWLRVTEKMNXVKLLDEVKTPWTVQWAERFCADAA 723
            ++VLG   SPF  RAR+AL ++ V YE L+E LG  KS+ LL +NPV+ KIPVL+  D + +CES +IV+Y+++    SG +     +LP DPY+RA+ RFW A++D+K++ AL  +  A    A+  A            +AF   S G+AFF G     G LD+A G +L  LR  E+++ + L+D   TP    W++RF A  A
Sbjct:    1 MRVLGGEVSPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPA 207          
BLAST of FC923655 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.858e-32
Identity = 78/198 (39.39%), Postives = 112/198 (56.57%), Query Frame = 1
Query:  121 KSDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKAFFGGNQIGFLDIAFGSYL------GWLRVTEKMNXVKLLDEVKTPWTVQW 696
            K +VK+LG W SPF  R  +ALK+K + YE++EE L +KS LLL  NP+HKK+PVL+HN K + ES +I+EY+DE W  +   ILP DPY+R+ ARF+A  VDE+    + ++G  + A A +                  K   GK +FGG  +GFLD   GS +      GW  +      ++++ E K P   +W
Sbjct:    4 KEEVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQN--PILPQDPYERSKARFFAKLVDEQ----IMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYFGGKTVGFLDFVAGSLIPFCLERGWEGI-----GLEVITEEKFPEFKRW 190          
BLAST of FC923655 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.184e-28
Identity = 74/202 (36.63%), Postives = 110/202 (54.46%), Query Frame = 1
Query:  121 KSDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILP-------SDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNXVKLLDEVKTPWTVQWAER 705
            + ++ +L FW SPF  R RIA+  K +E+E+ EE+LG+KS+LLL+SNPVH+KIPVL+H  +PV ESL+I++Y+D+A+  + P +LP          Y RA ARFWA YVD K +     +    G    +AA            +A +   +     GG ++GF+D+A   +  W    E+     +  E   P    WA R
Sbjct:    4 EKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGT-PHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKG--EPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARR 200          
BLAST of FC923655 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.077e-28
Identity = 72/201 (35.82%), Postives = 110/201 (54.73%), Query Frame = 1
Query:  121 KSDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSD------PYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNXVKLLDEVKTPWTVQWAER 705
            + ++ +L FW SPF  R RIA+  K +E+E+ EE+LG+KS+LLL+SNPVH+KIPVL+H  +PV ESL+I++Y+D+A+  +   + P++       Y RA ARFWA YVD K +     +    G    +AA            +A +   +     GG ++GF+D+A   +  W    E+     +  E   P    WA R
Sbjct:    4 EKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKG--EPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARR 200          
The following BLAST results are available for this feature:
BLAST of FC923655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX3_SOYBN1.985e-3440.31Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTX2_MAIZE7.542e-3440.10Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTXA_ARATH1.858e-3239.39Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTU1_ORYSJ6.184e-2836.63Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI8.077e-2835.82Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionC31707E08EF StrClemenN Citrus clementina cDNA clone C31707E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923655 ID=FC923655; Name=FC923655; organism=Citrus clementina; type=EST; length=727bp
AGTGGCGTAGTTCACATCCCCTACATTCATCTGGCTCTAATTATAAATAC
ACAGCCCACGAAGCAAAAGACATTTCATTTCAGTTGCGAGAGCAGAGCTT
AGAGAGAAAAAAAAATGGCAAAAAGCGACGTGAAGGTTTTGGGTTTTTGG
CCAAGCCCATTTCTGATGAGGGCAAGAATCGCACTTAAGATCAAGTCTGT
GGAGTATGAGTTTCTGGAGGAGAATTTGGGATCCAAAAGCGAGCTTCTGC
TTAAATCAAACCCTGTTCACAAGAAAATCCCCGTTCTGATTCACAATGAT
AAGCCTGTTTGCGAATCTCTCATTATTGTCGAGTACGTGGATGAGGCTTG
GTCCTCTTCAGGTCCCTCTATTCTTCCTTCTGATCCTTACGACCGTGCCG
TTGCTCGTTTCTGGGCCGCTTACGTTGATGAGAAGTGGTTCTCTGCCTTG
AGAGACATTGGTAGTGCAAATGGAGCGGAAGCTAAGAAAGCTGCAATTGA
GCAATTGATTGAAGTCTTGGTTTTGCTGGAGGATGCTTTTGTTAAGTGTA
GCAAAGGGAAGGCTTTCTTTGGTGGAAACCAAATTGGGTTTCTTGACATT
GCATTTGGTAGCTACTTGGGATGGCTGAGAGTGACAGAGAAAATGAATGA
NGTGAAGCTCCTTGATGAAGTCAAAACTCCCTGGACTGTTCAATGGGCTG
AGAGATTCTGTGCTGACGCTGCTGTCA
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