FC923660

Overview
NameFC923660
Unique NameFC923660
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_SALPB (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=pckA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.054e-46
Identity = 108/230 (46.96%), Postives = 135/230 (58.70%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHY-MTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIP-CVGPHPKNVILLACDAFGVLP 688
            A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   +  NL  R  +I GT Y GEMKKG+FSVM+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+  A+LENV   E    VD+ D S TENTR +YPI +I N   P     H   VI L  DAFGVLP
Sbjct:  141 AWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLP 368
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_SALPA (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi A GN=pckA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.054e-46
Identity = 108/230 (46.96%), Postives = 135/230 (58.70%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHY-MTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIP-CVGPHPKNVILLACDAFGVLP 688
            A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   +  NL  R  +I GT Y GEMKKG+FSVM+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+  A+LENV   E    VD+ D S TENTR +YPI +I N   P     H   VI L  DAFGVLP
Sbjct:  141 AWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLP 368
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_SALNS (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella newport (strain SL254) GN=pckA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.054e-46
Identity = 108/230 (46.96%), Postives = 135/230 (58.70%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHY-MTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIP-CVGPHPKNVILLACDAFGVLP 688
            A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   +  NL  R  +I GT Y GEMKKG+FSVM+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+  A+LENV   E    VD+ D S TENTR +YPI +I N   P     H   VI L  DAFGVLP
Sbjct:  141 AWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLP 368
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_SALHS (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella heidelberg (strain SL476) GN=pckA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.054e-46
Identity = 108/230 (46.96%), Postives = 135/230 (58.70%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHY-MTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIP-CVGPHPKNVILLACDAFGVLP 688
            A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   +  NL  R  +I GT Y GEMKKG+FSVM+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+  A+LENV   E    VD+ D S TENTR +YPI +I N   P     H   VI L  DAFGVLP
Sbjct:  141 AWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLP 368
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_SALEP (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella enteritidis PT4 (strain P125109) GN=pckA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.054e-46
Identity = 108/230 (46.96%), Postives = 135/230 (58.70%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHY-MTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIP-CVGPHPKNVILLACDAFGVLP 688
            A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   +  NL  R  +I GT Y GEMKKG+FSVM+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+  A+LENV   E    VD+ D S TENTR +YPI +I N   P     H   VI L  DAFGVLP
Sbjct:  141 AWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLP 368
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_SALDC (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella dublin (strain CT_02021853) GN=pckA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.054e-46
Identity = 108/230 (46.96%), Postives = 135/230 (58.70%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHY-MTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIP-CVGPHPKNVILLACDAFGVLP 688
            A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   +  NL  R  +I GT Y GEMKKG+FSVM+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+  A+LENV   E    VD+ D S TENTR +YPI +I N   P     H   VI L  DAFGVLP
Sbjct:  141 AWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLP 368
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_SALCH (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella choleraesuis GN=pckA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.054e-46
Identity = 108/230 (46.96%), Postives = 135/230 (58.70%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHY-MTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIP-CVGPHPKNVILLACDAFGVLP 688
            A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   +  NL  R  +I GT Y GEMKKG+FSVM+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+  A+LENV   E    VD+ D S TENTR +YPI +I N   P     H   VI L  DAFGVLP
Sbjct:  141 AWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLP 368
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_SALA4 (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella agona (strain SL483) GN=pckA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.054e-46
Identity = 108/230 (46.96%), Postives = 135/230 (58.70%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHY-MTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIP-CVGPHPKNVILLACDAFGVLP 688
            A+ + F+ NM IRPT EEL  F  PDF + N  +    ++    + S   +  NL  R  +I GT Y GEMKKG+FSVM+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I++AI+  A+LENV   E    VD+ D S TENTR +YPI +I N   P     H   VI L  DAFGVLP
Sbjct:  141 AWQAHFVKNMFIRPTDEELVGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYHAIRRDALLENVTVRE-DGTVDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLP 368
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_ECOSM (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=pckA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.054e-46
Identity = 106/230 (46.09%), Postives = 135/230 (58.70%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHY-MTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIP-CVGPHPKNVILLACDAFGVLP 688
            A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  R  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+  A+LENV   E    +D+ D S TENTR +YPI +I N   P     H   VI L  DAFGVLP
Sbjct:  142 AWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGSIDFDDGSKTENTRVSYPIYHIENIVKPVSKAGHATKVIFLTADAFGVLP 369
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_ECO7I (Phosphoenolpyruvate carboxykinase [ATP] OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=pckA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.054e-46
Identity = 106/230 (46.09%), Postives = 135/230 (58.70%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHY-MTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIP-CVGPHPKNVILLACDAFGVLP 688
            A+ + F+ NM IRP+ EEL  F  PDF + N  +    ++    + S   +  NL  R  +I GT Y GEMKKG+FS+M+YL+P + I S+H   N+G+ GDVA               D  R LIGDDEH W D+GV N EGGCYAK I LS+E EP+I+NAI+  A+LENV   E    +D+ D S TENTR +YPI +I N   P     H   VI L  DAFGVLP
Sbjct:  142 AWQAHFVKNMFIRPSDEELAGF-KPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVRE-DGSIDFDDGSKTENTRVSYPIYHIENIVKPVSKAGHATKVIFLTADAFGVLP 369
The following BLAST results are available for this feature:
BLAST of FC923660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_SALPB1.054e-4646.96Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALPA1.054e-4646.96Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALNS1.054e-4646.96Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALHS1.054e-4646.96Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALEP1.054e-4646.96Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALDC1.054e-4646.96Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALCH1.054e-4646.96Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALA41.054e-4646.96Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_ECOSM1.054e-4646.09Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]
PCKA_ECO7I1.054e-4646.09Phosphoenolpyruvate carboxykinase [ATP] OS=Escheri... [more]

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Properties
Property NameValue
Genbank descriptionC31707F01EF StrClemenN Citrus clementina cDNA clone C31707F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923660 ID=FC923660; Name=FC923660; organism=Citrus clementina; type=EST; length=742bp
AAGGGCTTACCATTCTTTGTTCATGCACAACATGTGTATCCGACCCACTC
CTGAAGAGCTGGAGAATTTCGGTACTCCGGACTTCACTATATGCAATGCT
GGACAGTTCCCGTGTAATCGTTATACTCACTACATGACATCCTCCACTAG
CATAGACCTTAATCTTGCTAGGAGGGAAATGGTCATCCTCGGCACACAGT
ACGCCGGGGAAATGAAGAAGGGTCTTTTCAGTGTTATGCATTATCTCATG
CCTAAACGTCAAATCCTCTCCCTTCATTCTGGCTGCAATATGGGAAAAGA
TGGAGATGTTGCCCTCTTCTTTGGATTGTCAGGTACTGGAAAGACAACAC
TGTCTACTGATCACAATCGATATCTGATTGGAGACGATGAACACTGTTGG
GGTGACAATGGTGTGTCAAACATTGAGGGTGGTTGCTATGCCAAGTGCAT
TGATCTCTCAAGGGAGAAGGAGCCTGATATCTGGAATGCCATCAAGTTTG
GCGCTGTGTTGGAAAATGTTGTGTTTGATGAGCATACCAGAGAGGTGGAT
TATTCTGACAAATCTGTCACAGAGAACACTCGTGCTGCCTACCCCATTGA
GTATATCCCCAATGCAAAGATACCATGCGTTGGTCCTCATCCCAAGAATG
TCATCCTTTTGGCATGTGATGCTTTTGGTGTACTCCCACAGTGAGCAAGC
TGAACCCTGGCACAACATGTACCATTTCATCAGTGGCTACAC
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