FC923660

Overview
NameFC923660
Unique NameFC923660
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_STAAM (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pckA PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.623e-55
Identity = 111/228 (48.68%), Postives = 144/228 (63.16%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++AIK+GA+LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  +I L  DAFGV+P
Sbjct:  130 AWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIP 356
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_STAAE (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain Newman) GN=pckA PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.623e-55
Identity = 111/228 (48.68%), Postives = 144/228 (63.16%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++AIK+GA+LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  +I L  DAFGV+P
Sbjct:  130 AWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIP 356
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_STAAC (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain COL) GN=pckA PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.623e-55
Identity = 111/228 (48.68%), Postives = 144/228 (63.16%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++AIK+GA+LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  +I L  DAFGV+P
Sbjct:  130 AWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIP 356
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_STAA9 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain JH9) GN=pckA PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.623e-55
Identity = 111/228 (48.68%), Postives = 144/228 (63.16%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++AIK+GA+LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  +I L  DAFGV+P
Sbjct:  130 AWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIP 356
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_STAA8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain NCTC 8325) GN=pckA PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.623e-55
Identity = 111/228 (48.68%), Postives = 144/228 (63.16%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++AIK+GA+LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  +I L  DAFGV+P
Sbjct:  130 AWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIP 356
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_STAA3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain USA300) GN=pckA PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.623e-55
Identity = 111/228 (48.68%), Postives = 144/228 (63.16%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++AIK+GA+LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  +I L  DAFGV+P
Sbjct:  130 AWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIP 356
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_STAA2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain JH1) GN=pckA PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.623e-55
Identity = 111/228 (48.68%), Postives = 144/228 (63.16%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++AIK+GA+LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  +I L  DAFGV+P
Sbjct:  130 AWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIP 356
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_STAA1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=pckA PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.623e-55
Identity = 111/228 (48.68%), Postives = 144/228 (63.16%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H+LF  NM IRP  +E      P+FTI +A  F  +       S T + ++   + ++I GT+YAGEMKKG+FSVM+YL+P + I+S+H   N+G+ GDVA               D +R LIGDDEH W  NGV NIEGGCYAK I+LS+EKEP I++AIK+GA+LEN V  E    VD+ D   TENTRAAYPI +I N  +P    HP  +I L  DAFGV+P
Sbjct:  130 AWHNLFAKNMFIRPESKEEATKIKPNFTIVSAPHFKADPEVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLPMQDIMSMHCSANVGEKGDVALFFGLSGTGKTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIKYGAILENTVVAE-DGSVDFEDNRYTENTRAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIP 356
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_BACLD (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pckA PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.853e-55
Identity = 110/228 (48.25%), Postives = 143/228 (62.72%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H+LF   + IRP   + +    P FTI +A  F  +       S T I ++  +R ++I GT+YAGEMKK +FS+M++L+P++ IL +H   N+G++G  A               D  R LIGDDEH W   GV NIEGGCYAKCI+LS EKEP I+NAI+FG+VLENVV D  T E DYSD   TENTRAAYPI+ I N   P +  HP+ ++ L  DAFGVLP
Sbjct:  128 AWHNLFARQLFIRPEEHDKKPEEQP-FTILSAPHFKADPLVDGTRSETFIIVSFEKRTILIGGTEYAGEMKKSIFSIMNFLLPEQNILPMHCSANIGEEGGTALFFGLSGTGKTTLSADPKRKLIGDDEHGWSSTGVFNIEGGCYAKCINLSEEKEPQIYNAIRFGSVLENVVVDSKTGEPDYSDSFYTENTRAAYPIDAIDNIVKPSIAAHPQTIVFLTADAFGVLP 354

HSP 2 Score: 21.9422 bits (45), Expect = 1.853e-55
Identity = 7/8 (87.50%), Postives = 8/8 (100.00%), Query Frame = 3 
Query:  717 MYHFISGY 740
            MYHF+SGY
Sbjct:  365 MYHFLSGY 372
[Close]
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_SHEB5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=pckA PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.768e-55
Identity = 110/228 (48.25%), Postives = 139/228 (60.96%), Query Frame = 2 
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H LF  N+ I   PEE      P + I NA  F C+       S  ++ LN A R++++ G +YAGEMKK +FSV ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W   GV NIEGGCYAKCIDLS++ EP IW+AI+FG VLENVV DEH R  +Y D S+TENTRAAYP+E+I   K    G  P  V+ L CD  GVLP
Sbjct:  116 AWHQLFARNLFI--IPEEFNRKNKPVWQIINAPDFVCDPARDGTNSDATVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHIAQRKEDNCGAEPHAVVFLTCDVSGVLP 340
The following BLAST results are available for this feature:
BLAST of FC923660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_STAAM1.623e-5548.68Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAE1.623e-5548.68Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAAC1.623e-5548.68Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA91.623e-5548.68Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA81.623e-5548.68Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA31.623e-5548.68Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA21.623e-5548.68Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_STAA11.623e-5548.68Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_BACLD1.853e-5548.25Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_SHEB52.768e-5548.25Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]

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Properties
Property NameValue
Genbank descriptionC31707F01EF StrClemenN Citrus clementina cDNA clone C31707F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923660 ID=FC923660; Name=FC923660; organism=Citrus clementina; type=EST; length=742bp
AAGGGCTTACCATTCTTTGTTCATGCACAACATGTGTATCCGACCCACTC
CTGAAGAGCTGGAGAATTTCGGTACTCCGGACTTCACTATATGCAATGCT
GGACAGTTCCCGTGTAATCGTTATACTCACTACATGACATCCTCCACTAG
CATAGACCTTAATCTTGCTAGGAGGGAAATGGTCATCCTCGGCACACAGT
ACGCCGGGGAAATGAAGAAGGGTCTTTTCAGTGTTATGCATTATCTCATG
CCTAAACGTCAAATCCTCTCCCTTCATTCTGGCTGCAATATGGGAAAAGA
TGGAGATGTTGCCCTCTTCTTTGGATTGTCAGGTACTGGAAAGACAACAC
TGTCTACTGATCACAATCGATATCTGATTGGAGACGATGAACACTGTTGG
GGTGACAATGGTGTGTCAAACATTGAGGGTGGTTGCTATGCCAAGTGCAT
TGATCTCTCAAGGGAGAAGGAGCCTGATATCTGGAATGCCATCAAGTTTG
GCGCTGTGTTGGAAAATGTTGTGTTTGATGAGCATACCAGAGAGGTGGAT
TATTCTGACAAATCTGTCACAGAGAACACTCGTGCTGCCTACCCCATTGA
GTATATCCCCAATGCAAAGATACCATGCGTTGGTCCTCATCCCAAGAATG
TCATCCTTTTGGCATGTGATGCTTTTGGTGTACTCCCACAGTGAGCAAGC
TGAACCCTGGCACAACATGTACCATTTCATCAGTGGCTACAC
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