FC923660

Overview
NameFC923660
Unique NameFC923660
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_SHEON (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella oneidensis GN=pckA PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.052e-54
Identity = 110/228 (48.25%), Postives = 138/228 (60.53%), Query Frame = 2
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H LF  N+ I   PEE      P + I NA  F C        S  ++ LN A R++++ G +YAGEMKK +FSV ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W   GV NIEGGCYAKCIDLS++ EP IW+AI+FG VLENVV DEH R  +Y D S+TENTRAAYP+E+I   K    G  P  V+ L CD  GVLP
Sbjct:  116 AWHQLFARNLFI--IPEEFNRQNKPVWQIINAPDFVCMPERDGTNSDAAVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHIAQRKEDNRGAEPHAVVFLTCDVSGVLP 340          
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_SHEB2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella baltica (strain OS223) GN=pckA PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.052e-54
Identity = 109/228 (47.81%), Postives = 139/228 (60.96%), Query Frame = 2
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H LF  N+ I   PEE      P + I NA  F C+       S  ++ LN A R++++ G +YAGEMKK +FSV ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W   GV NIEGGCYAKCIDLS++ EP IW+AI+FG VLENVV D+H R  +Y D S+TENTRAAYP+E+I   K    G  P  V+ L CD  GVLP
Sbjct:  116 AWHQLFARNLFI--IPEEFNRKDKPVWQIINAPDFVCDPARDGTNSDATVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDKH-RVPNYKDSSLTENTRAAYPLEHIAQRKEDNCGAEPHAVVFLTCDVSGVLP 340          
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_SHESR (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella sp. (strain MR-7) GN=pckA PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.794e-54
Identity = 110/228 (48.25%), Postives = 138/228 (60.53%), Query Frame = 2
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H LF  N+ I   PEE      P + I NA  F C        S  ++ LN A R++++ G +YAGEMKK +FSV ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W   GV NIEGGCYAKCIDLS++ EP IW+AI+FG VLENVV DEH R  +Y D S+TENTRAAYP+E+I   K    G  P  V+ L CD  GVLP
Sbjct:  116 AWHQLFARNLFI--IPEEFNRQDKPVWEIINAPDFVCVPERDGTNSDAAVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHIAQRKEDNRGAEPHAVVFLTCDVSGVLP 340          
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_SHESM (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella sp. (strain MR-4) GN=pckA PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.794e-54
Identity = 110/228 (48.25%), Postives = 138/228 (60.53%), Query Frame = 2
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H LF  N+ I   PEE      P + I NA  F C        S  ++ LN A R++++ G +YAGEMKK +FSV ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W   GV NIEGGCYAKCIDLS++ EP IW+AI+FG VLENVV DEH R  +Y D S+TENTRAAYP+E+I   K    G  P  V+ L CD  GVLP
Sbjct:  116 AWHQLFARNLFI--IPEEFNRQDKPVWQIINAPDFVCVPERDGTNSDAAVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHIAQRKEDNRGAEPHAVVFLTCDVSGVLP 340          
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_SHESA (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella sp. (strain ANA-3) GN=pckA PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.794e-54
Identity = 110/228 (48.25%), Postives = 138/228 (60.53%), Query Frame = 2
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            A+H LF  N+ I   PEE      P + I NA  F C        S  ++ LN A R++++ G +YAGEMKK +FSV ++L+P + +L +H   N+GKDGD                 D  R+LIGDDEH W   GV NIEGGCYAKCIDLS++ EP IW+AI+FG VLENVV DEH R  +Y D S+TENTRAAYP+E+I   K    G  P  V+ L CD  GVLP
Sbjct:  116 AWHQLFARNLFI--IPEEFNRQDKPVWQIINAPDFVCVPERDGTNSDAAVILNFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAQGVLPMHCSANVGKDGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWDAIRFGTVLENVVMDEH-RVPNYKDSSLTENTRAAYPLEHIAQRKEDNRGAEPHAVVFLTCDVSGVLP 340          
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_AMOA5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Amoebophilus asiaticus (strain 5a2) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.060e-54
Identity = 102/230 (44.35%), Postives = 150/230 (65.22%), Query Frame = 2
Query:    2 RAYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKR-QILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            +++ +LF++N+ +RP  +EL  F +PDF I    +F  + +     ++    +N  +R ++I GT +AGE+KK +F+V++YL+P+  Q+L +H   N+G DG+ A               D NR LIGDDEH W D G+ N EGGCYAK I+L++E EP I++AIKFG ++EN+ F   TR +DY D S+TEN R AYP+EYIP A IP +G  PK++  L+CDA+GVLP
Sbjct:  131 QSWTNLFVNNLFLRPIDKELTKF-SPDFLILQVPEFQADPHVDGTKNANFTIINFTKRVILIGGTGFAGEIKKAVFTVLNYLLPQEHQVLPMHCSANVGTDGNTAIYFGLSGTGKTTLSADPNRKLIGDDEHGWCDKGIFNFEGGCYAKTINLAKESEPQIFDAIKFGTIVENMRFFAGTRTIDYKDSSITENVRCAYPLEYIPGALIPSIGSIPKHIFFLSCDAYGVLP 359          
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_NITWN (Phosphoenolpyruvate carboxykinase [ATP] OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=pckA PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 3.424e-54
Identity = 111/238 (46.64%), Postives = 147/238 (61.76%), Query Frame = 2
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPQ*AS*TLAQ 715
            A+HSLF+  +  RP   EL  F  P+ T+ +   F  +   H + S   + ++  RR ++I G+ YAGEMKK +F+ ++Y +P + +L +H   N+G  GD A               D  R LIGDDEH W  +G+ N EGGCYAKCI LSRE EP+I+ A K FGAVLENVV DE TR  D++D S TENTR+AYP+E+IPNA +      PKN+++LA DAFGVLP  A  T AQ
Sbjct:  131 AWHSLFIRTLLRRPETSELAAF-VPELTVIDLPSFRADPQRHGVRSENVVAIDFTRRIILIGGSHYAGEMKKSIFTTLNYYLPDQDVLPMHCSANVGPGGDSAIFFGLSGTGKTTLSADPGRTLIGDDEHGWSKDGIFNFEGGCYAKCIRLSREAEPEIYAASKRFGAVLENVVHDEVTRVPDFNDGSKTENTRSAYPLEFIPNASLTGCAGQPKNLVMLAADAFGVLPPIARLTPAQ 367          

HSP 2 Score: 22.7126 bits (47), Expect = 3.424e-54
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 3
Query:  705 PWHNMYHFISGY 740
            P   MYHF+SGY
Sbjct:  365 PAQAMYHFLSGY 376          
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_GEOUR (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter uraniireducens (strain Rf4) GN=pckA PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 3.424e-54
Identity = 111/231 (48.05%), Postives = 145/231 (62.77%), Query Frame = 2
Query:    2 RAYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKR-QILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLP 688
            +A+HSLF  NM ++ T  ELEN   P FT+ +   F          S T I +N A+R ++I GT YAGE+KK +F+V++YL+P   +++S+H   N G+ GDVA                 NR LIGDDEH W D+GV N EGGCYAK I+LS+E EP+I+    KFG +LENV  D  +R +D +D S TENTRA+YPI +IPN     +G HP NVI+L CDAFGVLP
Sbjct:  130 KAWHSLFARNMFVKATAAELENH-KPRFTVIDMPNFHAVPQIDGTNSETFIIINFAKRLVIIGGTSYAGEIKKSIFTVLNYLLPHHSKVMSMHCSANTGEKGDVAVFFGLSGTGKTTLSAAPNRSLIGDDEHGWDDDGVFNFEGGCYAKIINLSKESEPEIYETTRKFGTILENVAIDTISRRIDLNDDSFTENTRASYPITHIPNIVPSGMGGHPTNVIMLTCDAFGVLP 359          

HSP 2 Score: 22.7126 bits (47), Expect = 3.424e-54
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 3
Query:  705 PWHNMYHFISGY 740
            P   MYHF+SGY
Sbjct:  366 PEQAMYHFLSGY 377          
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_RHOP5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain BisA53) GN=pckA PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 5.819e-54
Identity = 111/238 (46.64%), Postives = 147/238 (61.76%), Query Frame = 2
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPQ*AS*TLAQ 715
            A+HSLF+  +  RP    L +F  P+ TI +   F  +   H   S   + ++  R+ ++I GTQYAGEMKK +F+ ++Y +P + +L +H   N+G DGD A               D NR LIGDDEH WG +GV N EGGCYAKCI LS E EP+I+ A  +FGA+LEN V D  TR+ D++D S TENTR+AYP+E IPNA +      PKNV++LA DAFGV+P  A  T AQ
Sbjct:  131 AWHSLFIRTLLRRPETAALASF-VPELTIIDLASFRADPKRHGCQSENVVAIDFTRKIVLIGGTQYAGEMKKSVFTTLNYYLPDKGVLPMHCSANVGPDGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLSAEAEPEIFAASNRFGAILENTVLDPITRKPDFNDGSKTENTRSAYPLESIPNASLTGRAGLPKNVVMLAADAFGVMPPIAKLTPAQ 367          

HSP 2 Score: 22.7126 bits (47), Expect = 5.819e-54
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 3
Query:  705 PWHNMYHFISGY 740
            P   MYHF+SGY
Sbjct:  365 PAQAMYHFLSGY 376          
BLAST of FC923660 vs. ExPASy Swiss-Prot
Match: PCKA_RHOPB (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain BisB18) GN=pckA PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 7.585e-54
Identity = 111/238 (46.64%), Postives = 147/238 (61.76%), Query Frame = 2
Query:    5 AYHSLFMHNMCIRPTPEELENFGTPDFTICNAGQFPCNRYTHYMTSSTSIDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPQ*AS*TLAQ 715
            A+HSLF+  +  RP   EL +F  P+ TI +   F  +   H   S   + ++  R+ ++I GTQYAGEMKK +F+ ++Y +P + +L +H   N+G DGD A               D NR LIGDDEH WG +GV N EGGCYAKCI LS E EP+I+ A  +FGA+LEN V D  TR+ D++D S TENTR+AYP+E IPNA        PKNV++LA DAFGV+P  A  + AQ
Sbjct:  131 AWHSLFIRTLLRRPETAELASF-VPELTIIDLASFRADPARHGCKSENVVAIDFTRKIVLIGGTQYAGEMKKSVFTTLNYYLPDKGVLPMHCSANVGPDGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLSAEAEPEIFAASNRFGAILENCVLDPITRKPDFNDGSKTENTRSAYPLESIPNASPTGRAGQPKNVVMLAADAFGVMPPIAKLSPAQ 367          

HSP 2 Score: 22.7126 bits (47), Expect = 7.585e-54
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 3
Query:  705 PWHNMYHFISGY 740
            P   MYHF+SGY
Sbjct:  365 PAQAMYHFLSGY 376          
The following BLAST results are available for this feature:
BLAST of FC923660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_SHEON1.052e-5448.25Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHEB21.052e-5447.81Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHESR1.794e-5448.25Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHESM1.794e-5448.25Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_SHESA1.794e-5448.25Phosphoenolpyruvate carboxykinase [ATP] OS=Shewane... [more]
PCKA_AMOA53.060e-5444.35Phosphoenolpyruvate carboxykinase [ATP] OS=Amoebop... [more]
PCKA_NITWN3.424e-5446.64Phosphoenolpyruvate carboxykinase [ATP] OS=Nitroba... [more]
PCKA_GEOUR3.424e-5448.05Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]
PCKA_RHOP55.819e-5446.64Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_RHOPB7.585e-5446.64Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]

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Properties
Property NameValue
Genbank descriptionC31707F01EF StrClemenN Citrus clementina cDNA clone C31707F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923660 ID=FC923660; Name=FC923660; organism=Citrus clementina; type=EST; length=742bp
AAGGGCTTACCATTCTTTGTTCATGCACAACATGTGTATCCGACCCACTC
CTGAAGAGCTGGAGAATTTCGGTACTCCGGACTTCACTATATGCAATGCT
GGACAGTTCCCGTGTAATCGTTATACTCACTACATGACATCCTCCACTAG
CATAGACCTTAATCTTGCTAGGAGGGAAATGGTCATCCTCGGCACACAGT
ACGCCGGGGAAATGAAGAAGGGTCTTTTCAGTGTTATGCATTATCTCATG
CCTAAACGTCAAATCCTCTCCCTTCATTCTGGCTGCAATATGGGAAAAGA
TGGAGATGTTGCCCTCTTCTTTGGATTGTCAGGTACTGGAAAGACAACAC
TGTCTACTGATCACAATCGATATCTGATTGGAGACGATGAACACTGTTGG
GGTGACAATGGTGTGTCAAACATTGAGGGTGGTTGCTATGCCAAGTGCAT
TGATCTCTCAAGGGAGAAGGAGCCTGATATCTGGAATGCCATCAAGTTTG
GCGCTGTGTTGGAAAATGTTGTGTTTGATGAGCATACCAGAGAGGTGGAT
TATTCTGACAAATCTGTCACAGAGAACACTCGTGCTGCCTACCCCATTGA
GTATATCCCCAATGCAAAGATACCATGCGTTGGTCCTCATCCCAAGAATG
TCATCCTTTTGGCATGTGATGCTTTTGGTGTACTCCCACAGTGAGCAAGC
TGAACCCTGGCACAACATGTACCATTTCATCAGTGGCTACAC
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