FC923663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: ATD1B_DANRE (ATPase family AAA domain-containing protein 1-B OS=Danio rerio GN=atad1b PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.443e-34 Identity = 70/148 (47.30%), Postives = 100/148 (67.57%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 ++T KW+GE +K AVFSLA K+ PS++F+DE+DS L R + +HEA MK +FM WDGL T +V+++ ATNRP DLD A++RR+P R +N P+ R+ I+++IL E + S V+L IA DG+SGSDL+ +C AA Sbjct: 165 TLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFL-RNRSSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILRRMPTRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAA 311
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: FIGL1_DROME (Fidgetin-like protein 1 OS=Drosophila melanogaster GN=CG3326 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 5.482e-34 Identity = 87/223 (39.01%), Postives = 128/223 (57.40%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDV-DLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPL---KMDDFKYAHEQVCASVSSESTNMNELLXWNELYG 659 S+TSKW G+ EK VK +F++A+ P+++F+DEVDS+L +R + E+E+ ++KNEF+++ DG + ++ RVLV+ ATNRP +LDEAV RR RRL V LP R+KII ++ + + DV + +A + DGYSG+D+ LC A+ P +P ++ L MDDFK A + SVSSE E WNE+YG Sbjct: 318 SLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKR-SANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRRRFVRRLYVPLPTREARQKIIEKLIHQVKHNLDVRQVIELAELTDGYSGADVDTLCRYASMAP-----------------LRSLTPDQMEVIETHQLPAVTMDDFKQALRVISKSVSSEDCKQFE--AWNEIYG 520
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_RAT (Spastin OS=Rattus norvegicus GN=Spast PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34 Identity = 81/221 (36.65%), Postives = 135/221 (61.09%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGE 662 S+TSK+ GEGEK V+A+F++A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ +RVLV+ ATNRP +LDEAV+RR +R+ V+LP+ R +++ +L K+ + +L +A M DGYSGSDL L AA P S+ ++R +++ DF + +++ SVS ++ + + WN+ +G+ Sbjct: 375 SLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKN--------------MSASEMRNIRLSDFTESLKKIKRSVSPQT--LEAYIRWNKDFGD 578
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_MOUSE (Spastin OS=Mus musculus GN=Spast PE=2 SV=3) HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34 Identity = 81/221 (36.65%), Postives = 135/221 (61.09%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGE 662 S+TSK+ GEGEK V+A+F++A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ +RVLV+ ATNRP +LDEAV+RR +R+ V+LP+ R +++ +L K+ + +L +A M DGYSGSDL L AA P S+ ++R +++ DF + +++ SVS ++ + + WN+ +G+ Sbjct: 408 SLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKN--------------MSASEMRNIRLSDFTESLKKIKRSVSPQT--LEAYIRWNKDFGD 611
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_HUMAN (Spastin OS=Homo sapiens GN=SPAST PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34 Identity = 81/221 (36.65%), Postives = 135/221 (61.09%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGE 662 S+TSK+ GEGEK V+A+F++A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ +RVLV+ ATNRP +LDEAV+RR +R+ V+LP+ R +++ +L K+ + +L +A M DGYSGSDL L AA P S+ ++R +++ DF + +++ SVS ++ + + WN+ +G+ Sbjct: 410 SLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKN--------------MSASEMRNIRLSDFTESLKKIKRSVSPQT--LEAYIRWNKDFGD 613
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_CHICK (Spastin OS=Gallus gallus GN=SPAST PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34 Identity = 79/221 (35.75%), Postives = 137/221 (61.99%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGE 662 S+TSK+ GEGEK V+A+F++A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ ++R+LV+ ATNRP +LD+AV+RR +R+ V+LP+ R +++ +L+K+ + +L +A M DGYSGSDL L AA P S+ ++R +K+ DF + +++ S+S ++ + + WN+ +G+ Sbjct: 407 SLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGYSGSDLTALVKDAALGPIRELKPEQVKN--------------MSASEMRNIKLSDFTESLKKIKRSLSPQT--LEAYIRWNKDFGD 610
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_ANOGA (Spastin OS=Anopheles gambiae GN=spas PE=3 SV=5) HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34 Identity = 73/150 (48.67%), Postives = 108/150 (72.00%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 ++TSK+ G+GEK V+A+F++A ++ PS++F+DEVDS+L R + EHEA R++K EF+V +DGL + +R++V+AATNRP +LDEA +RR P+R+ V LPD RE ++R +L K+ SD DL +A + +GYSGSDL L AA Sbjct: 571 TLTSKYVGDGEKLVRALFAVARELQPSIIFIDEVDSVLSERSS-NEHEATRRLKTEFLVQFDGLPANSEADRIVVMAATNRPQELDEAALRRFPKRVYVTLPDRDTRELLLRRLLQKQGSPLSDADLAHLAQLTEGYSGSDLTALARDAA 719
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_PIG (Spastin (Fragment) OS=Sus scrofa GN=SPAST PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33 Identity = 80/221 (36.20%), Postives = 135/221 (61.09%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGE 662 S+TSK+ GEGEK V+A+F++A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ +RVLV+ ATNRP +LDEAV+RR +R+ V+LP+ R +++ +L K+ + +L +A + DGYSGSDL L AA P S+ ++R +++ DF + +++ SVS ++ + + WN+ +G+ Sbjct: 407 SLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLL-RERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARLTDGYSGSDLTALAKDAALGPIRELKPEQVKN--------------MSASEMRNIRLSDFTESLKKIKRSVSPQT--LEAYIRWNKDFGD 610
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEBR (Fidgetin-like protein 1 OS=Caenorhabditis briggsae GN=figl-1 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33 Identity = 75/153 (49.02%), Postives = 105/153 (68.63%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVIL--AKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCP 455 S+TSKW GEGEK V+A+FS+A PSV+F+DE+DS+L R EHE+ R++K EF+V DG+ T ER+LVL ATNRP +LDEA RR +RL + LP+ +R +I+ +L + E+ +D +LE I + DGYSG+D++ LC AA P Sbjct: 384 SLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEIDSLLSARSE-SEHESSRRIKTEFLVQLDGVNTAPDERLLVLGATNRPQELDEAARRRFQKRLYIALPEPDSRTQIVENLLRGTRHEI-TDHNLEKIRRLTDGYSGADMRQLCTEAAMGP 534
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_IXOSC (Spastin OS=Ixodes scapularis GN=spas PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.595e-33 Identity = 86/224 (38.39%), Postives = 131/224 (58.48%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVD---VRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGE 662 S+TSK+ GEGEK V+A+F++A ++ PS++F+DEVDS+L R++ EHEA R++K EF+V +DGL T +ERVLV+ ATNRP +LD+A +RR +R+ V LPD R ++ +L K D L+ +A + +GYSGSDL L AA P +P VD +R + + DF + ++V SV+ +S + + WN +G+ Sbjct: 442 SLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLSERKD-NEHEATRRLKTEFLVEFDGLHTGSEERVLVMGATNRPQELDDAALRRFTKRVYVTLPDHNTRVILLEKLLKKHNNPLSADKLKYLARLTEGYSGSDLTALAKDAALGP-----------------IRELNPEQVRCVDPKKMRNISLQDFLDSLKKVRRSVTPQSLDFFD--RWNREFGD 645 The following BLAST results are available for this feature:
BLAST of FC923663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 346
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923663 ID=FC923663; Name=FC923663; organism=Citrus clementina; type=EST; length=705bpback to top |