FC923663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_DROGR (Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.350e-32 Identity = 86/222 (38.74%), Postives = 129/222 (58.11%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLR-TKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEG-IANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGE 662 S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D D G +A + +GYSGSDL L AA P N +R + DF + +++ SV+ +S N E W++ YG+ Sbjct: 575 SLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDVQTRELLLNRLLQKQGSPLDSDALGRLAKITEGYSGSDLTALAKDAALEP--------------IRELNVEQVKCLDISAMRQITEKDFHNSLKRIRRSVAPQSLNSYE--KWSQDYGD 779
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.764e-32 Identity = 77/221 (34.84%), Postives = 135/221 (61.09%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGE 662 S+TSK+ GEGEK V+A+FS+A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ +RVLV+ ATNRP +LD+AV+RR +R+ V+LP+ R +++ +L+K+ ++ +L ++ + +GYSGSD+ L AA P ++ ++R +K DF + +++ SVS + + + WN+ +G+ Sbjct: 397 SLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLLLLKNLLSKQGNPLNEKELTQLSRLTEGYSGSDITALAKDAALGPIRELKPEQVKN--------------MAASEMRNIKYSDFLSSLKKIKCSVS--PSTLESYIRWNKEFGD 600
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_DROVI (Spastin OS=Drosophila virilis GN=spas PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.764e-32 Identity = 87/224 (38.84%), Postives = 131/224 (58.48%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMA---DGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGE 662 S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL + +R++VLAATNRP +LDEA +RR +R+ V+LP RE ++ +L K+ S +D E +A +A DGYSGSDL L AA P N +RP+ DF + +++ SV+ +S N E W++ YG+ Sbjct: 562 SLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPGVQTRELLLSRLLQKQ--GSPLDTEALARLAKITDGYSGSDLTALAKDAALEP--------------IRELNVEQVKCLDISAMRPITEKDFHNSLKRIRRSVAPQSLNSYE--KWSQDYGD 766
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_DROAN (Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.764e-32 Identity = 86/222 (38.74%), Postives = 128/222 (57.66%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLR-TKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGE 662 S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D + L +A DGYSGSDL L AA P N +R + DF + +++ SV+ +S N E W++ YG+ Sbjct: 563 SLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-NEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLSRLLQKQGSPLDTEALRRLAKTTDGYSGSDLTALAKDAALEP--------------IRELNVEQVKCLDISAMRAITESDFHSSLKRIRRSVAPQSLNSYE--KWSQDYGD 767
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: YJNA_SCHPO (Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe GN=SPCC24B10.10c PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.303e-32 Identity = 69/150 (46.00%), Postives = 100/150 (66.67%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCP 455 +T KWFGE K V A+F+LA K+ P+++F+DE+D+ L +R+ +HEAM ++K EFM WDGL + + RVLVL ATNRP D+DEA+ RR+P+ + LP+A R KI+ + L K L ++ D G+ N G SGS +K +C +A P Sbjct: 161 LTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFLRQRQRT-DHEAMAQIKAEFMSMWDGLLS-GQSRVLVLGATNRPADIDEAIRRRMPKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVVNATAGLSGSYIKEVCRSALSVP 308
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_XENLA (Spastin OS=Xenopus laevis GN=spast PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.303e-32 Identity = 78/221 (35.29%), Postives = 134/221 (60.63%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGE 662 S+TSK+ GEGEK V+A+FS+A ++ PS++F+DEVDS+L R GEH+A R++K EF++ +DG+++ +RVLV+ ATNRP +LD+AV+RR +R+ V LP+ R +++ +L+K+ S+ +L ++ + +GYSGSD+ L AA P ++ ++R +K DF + +++ SVS + + + WN+ +G+ Sbjct: 394 SLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERRE-GEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLRRFTKRVYVALPNEETRLVLLKNLLSKQGNPLSEKELTQLSRLTEGYSGSDITALAKDAALGPIRELKPEQVKN--------------MAASEMRNMKYSDFLGSLKKIKCSVS--HSTLESYIRWNQDFGD 597
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: KTNA1_STRPU (Katanin p60 ATPase-containing subunit OS=Strongylocentrotus purpuratus GN=KATNA1 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.303e-32 Identity = 67/153 (43.79%), Postives = 104/153 (67.97%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLR-----TKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 S+TSK+ GE EK V+ +F +A APS +F+DE+DS+ +R EHEA R++K+E ++ DG+ + + V+VLAATN P+D+DEA+ RRL +R+ + LP+ RE+++R+ L + LA D+DL+ IA DGYSG+D+ N+C A+ Sbjct: 302 SLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSICSKRGTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDAS 454
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: KTNA1_XENTR (Katanin p60 ATPase-containing subunit A1 OS=Xenopus tropicalis GN=katna1 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.131e-32 Identity = 83/224 (37.05%), Postives = 126/224 (56.25%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYG 659 ++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K E +V DG+ + V+VLAATN P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DV++E IA DGYSG+D+ N+C A+ N + ++ P M+DF+ A ++V SVS+ E W E +G Sbjct: 278 TLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDAS----LMAMRRRIEGLTPEEIRNLSRDDMH-----MPTTMEDFEMALKKVSKSVSASDIEKYE--KWIEEFG 490
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_DROSI (Spastin OS=Drosophila simulans GN=spas PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.752e-32 Identity = 85/222 (38.29%), Postives = 128/222 (57.66%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLR-TKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGE 662 S+TSK+ G+GEK V+A+F++A + PS++F+DEVDS+L R + EHEA R++K EF+V +DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D + L +A + DGYSGSDL AA P N +R + DF + +++ SV+ +S N E W++ YG+ Sbjct: 551 SLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-SEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTARPKDAALEP--------------IRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSYE--KWSQDYGD 755
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: MEI1_CAEEL (Meiotic spindle formation protein mei-1 OS=Caenorhabditis elegans GN=mei-1 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.752e-32 Identity = 66/148 (44.59%), Postives = 103/148 (69.59%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTK-DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 ++SKW G+ EK V+ +F LA APS++F+DE+D++ G+R N GEHEA R++K+EF+V DG + K D RV VLAATN P++LDEA+ RR +R+ + LPD R+K+I + + +++ + +A +G+SG+D+ +LC TAA Sbjct: 262 LSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAA 409 The following BLAST results are available for this feature:
BLAST of FC923663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 346
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923663 ID=FC923663; Name=FC923663; organism=Citrus clementina; type=EST; length=705bpback to top |