FC923663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: MSP1_YEAST (Protein MSP1 OS=Saccharomyces cerevisiae GN=MSP1 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 9.677e-31 Identity = 71/149 (47.65%), Postives = 99/149 (66.44%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASD-VDLEGIANMADGYSGSDLKNLCVTAA 446 SI KW+GE K V A+FSLA+K+ P ++F+DE+DS L R + +HE +K EFM WDGL + RV+++ ATNR D+D+A +RRLP+R +V+LP + R KI+ V+L +L D DL+ IA+ G+SGSDLK LC AA Sbjct: 161 SIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFL-RERSSTDHEVTATLKAEFMTLWDGL--LNNGRVMIIGATNRINDIDDAFLRRLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAA 306
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: KTNA1_RAT (Katanin p60 ATPase-containing subunit A1 OS=Rattus norvegicus GN=Katna1 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30 Identity = 67/153 (43.79%), Postives = 102/153 (66.67%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 ++TSK+ GE EK V+ +F +A +P+ +F+DE+DS+ RR EHEA R++K E +V DG+ + V+VLAATN P+D+DEA+ RRL +R+ + LP A RE+++R+ L + ELA DV+L IA +GYSG+D+ N+C A+ Sbjct: 277 TLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDAS 429
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_CAEEL (Probable spastin homolog spas-1 OS=Caenorhabditis elegans GN=spas-1 PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30 Identity = 66/154 (42.86%), Postives = 99/154 (64.29%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDV---DLEGIANMADGYSGSDLKNLCVTAAHCP 455 S+TSKW G+ EK ++ +F +A PS++F+DE+DS+L R + E R+MK EF+V +DG + +R+LV+ ATNRP +LD+AV+RR P+R+M+NLPD R+++I L K + + D+ IA+ G+S SDL LC AA P Sbjct: 307 SLTSKWVGDSEKTIRGLFQIARNAQPSIIFIDEIDSILCERSEK-DAEVSRRMKTEFLVQFDGATSSADDRILVIGATNRPHELDDAVLRRFPKRIMLNLPDEEARKELITKTLKKHNMMDGLISSDIRYIASNTSGFSNSDLVALCKEAAMVP 459
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: KATL1_MOUSE (Katanin p60 ATPase-containing subunit A-like 1 OS=Mus musculus GN=Katnal1 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.156e-30 Identity = 67/153 (43.79%), Postives = 103/153 (67.32%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDG----LRTKDKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 ++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K+E ++ DG L D + V+VLAATN P+D+DEA+ RRL +R+ + LP A R +++++ L + EL DV LE IA+ +GYSG+D+ N+C A+ Sbjct: 274 TLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDAS 426
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_BRUMA (Probable spastin homolog Bm1_53365 OS=Brugia malayi GN=Bm1_53365 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.816e-30 Identity = 74/205 (36.10%), Postives = 119/205 (58.05%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDL---EGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVS 608 S+TSKW G+ EK V+A+F +A P+++F+DE+DS+L R N E E R+MK EF++ DG+ + +R+LV+ ATNRP +LD A++RR P+R+++++P+A R K+I +L K + + D+ L + +A GYS SDL LC AA P +R S ++RP+ + DF+ A + + S + Sbjct: 247 SLTSKWVGDAEKIVRALFQIARNGQPTIIFIDEIDSILCER-NEKETEVSRRMKTEFLIQMDGMLSSKDDRLLVIGATNRPEELDSAILRRFPKRILIDVPNAAARLKLIMSLLEKTKTSFDLGLTQRQILAEWTHGYSNSDLVALCREAAMVP--------------IRDLSRKDIKNLVSTELRPITLRDFEIAMKAIKPSTN 436
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.677e-30 Identity = 82/232 (35.34%), Postives = 128/232 (55.17%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPG-EHEAMRKMKNEFMVNWDGL-------RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDV-DLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVD-VRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGEGG 668 S+TSK+ GE EK V+A+F+LA K++PS++FVDE+DS+L R + G EHE R++K EF++ W L +T D RVLVLAATN P+ +D+A RR RR + LPD R + +L ++ + + D+E I + YSGSDL L AA P + L++ ++ +RP+ +DDFK + + + SV+ + + W++ +G G Sbjct: 527 SLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSARSSDGNEHETSRRIKTEFLIQWSSLARAAASRQTADHPRVLVLAATNLPWCIDDAARRRFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLEDIEAIVKATEYYSGSDLTALAKDAAMGP----------------LRSLGESLLFTKMESIRPINLDDFKTSIKVIRPSVNLQ--GLERYSEWDKEFGSQG 740
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: MSP1_CAEEL (Mitochondrial sorting homolog OS=Caenorhabditis elegans GN=mspn-1 PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.677e-30 Identity = 63/144 (43.75%), Postives = 98/144 (68.06%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLC 434 ++T KW+GE +K AVFS+A K P+++F+DE+DS L R++ +HE+ MK +FM WDG + ++++V+ ATNRP D+D A++RR+ R V +P+A R +I+ VIL E++ + V+L IA A+G SGSDLK +C Sbjct: 152 NLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSFLRDRQSH-DHESTAMMKAQFMTLWDGFSSSG-DQIIVMGATNRPRDVDAAILRRMTARFQVPVPNAKQRSQILNVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVC 293
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: KATL1_RAT (Katanin p60 ATPase-containing subunit A-like 1 OS=Rattus norvegicus GN=Katnal1 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.677e-30 Identity = 66/153 (43.14%), Postives = 102/153 (66.67%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDG----LRTKDKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 ++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K+E ++ DG L D + V+VLAATN P+D+DEA+ RRL +R+ + LP A R +++++ L + EL D+ LE IA +GYSG+D+ N+C A+ Sbjct: 274 TLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDAS 426
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: KATL1_RABIT (Katanin p60 ATPase-containing subunit A-like 1 OS=Oryctolagus cuniculus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.272e-30 Identity = 67/153 (43.79%), Postives = 102/153 (66.67%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDG----LRTKDKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 ++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K+E +V DG L D + V+VLAATN P+D+DEA+ RRL +R+ + LP A R +++++ L + EL D+ LE IA +GYSG+D+ N+C A+ Sbjct: 276 TLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLVQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELDPDIRLEDIAEKIEGYSGADITNVCRDAS 428
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: KATL1_PAPAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Papio anubis GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.272e-30 Identity = 66/153 (43.14%), Postives = 102/153 (66.67%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDG----LRTKDKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 ++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K+E ++ DG L D + V+VLAATN P+D+DEA+ RRL +R+ + LP A R +++++ L + EL D+ LE IA +GYSG+D+ N+C A+ Sbjct: 276 TLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDAS 428 The following BLAST results are available for this feature:
BLAST of FC923663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 346
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923663 ID=FC923663; Name=FC923663; organism=Citrus clementina; type=EST; length=705bpback to top |