FC923663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: KATL1_OTOGA (Katanin p60 ATPase-containing subunit A-like 1 OS=Otolemur garnettii GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.272e-30 Identity = 66/153 (43.14%), Postives = 102/153 (66.67%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDG----LRTKDKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 ++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K+E ++ DG L D + V+VLAATN P+D+DEA+ RRL +R+ + LP A R +++++ L + EL D+ LE IA +GYSG+D+ N+C A+ Sbjct: 276 TLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDAS 428
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: KATL1_HUMAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens GN=KATNAL1 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.272e-30 Identity = 66/153 (43.14%), Postives = 102/153 (66.67%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDG----LRTKDKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 ++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K+E ++ DG L D + V+VLAATN P+D+DEA+ RRL +R+ + LP A R +++++ L + EL D+ LE IA +GYSG+D+ N+C A+ Sbjct: 276 TLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDAS 428
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SAP1_YEAST (Protein SAP1 OS=Saccharomyces cerevisiae GN=SAP1 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29 Identity = 80/242 (33.06%), Postives = 124/242 (51.24%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRT------------------KDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILA-KEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGEGGS 671 S+TSK+ GE EK V+A+F++A K++PS++FVDE+DS++G R N E+E+ R++KNEF+V W L + +D RVLVLAATN P+ +DEA RR RR + LP+ R + +L+ ++ ++ D + + + +GYSGSD+ +L AA P +RP+ + DFK + + SVS + E W +G GS Sbjct: 673 SLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSIMGSRNNENENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEAARRRFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESDFDELVKITEGYSGSDITSLAKDAAMGPLRDLGDKLLETEREM---------------IRPIGLVDFKNSLVYIKPSVSQDGLVKYE--KWASQFGSSGS 897
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: KATL1_SORAR (Katanin p60 ATPase-containing subunit A-like 1 OS=Sorex araneus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29 Identity = 66/153 (43.14%), Postives = 101/153 (66.01%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDG----LRTKDKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 ++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K+E ++ DG L D + V+VLAATN P+D+DEA+ RRL +R+ + LP A R ++++ L + EL D+ LE IA +GYSG+D+ N+C A+ Sbjct: 276 TLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRTDLLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDAS 428
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: KTNA1_DANRE (Katanin p60 ATPase-containing subunit A1 OS=Danio rerio GN=katna1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.397e-29 Identity = 64/152 (42.11%), Postives = 102/152 (67.11%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL----RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 ++TSK+ GE EK V+ +F +A AP+ +F+DE+DS+ RR EHEA R++K E +V DG+ + V+VLAATN P+D+DEA+ RRL +R+ + LP A R ++++ L + +LA+DV+++ IA +GYSG+D+ N+C A+ Sbjct: 272 TLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGRVDLLKINLKELDLANDVNMDKIAEQMEGYSGADITNVCRDAS 423
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: TBP6_YEAST (Probable 26S protease subunit YTA6 OS=Saccharomyces cerevisiae GN=YTA6 PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 82/235 (34.89%), Postives = 132/235 (56.17%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGL-----RTKDK-----ERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVD-VRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYGEGGS 671 S+ SK+ GE EK V+A+F +A K++PS++F+DE+DSML R + E+E+ R++K E ++ W L +++D+ RVLVL ATN P+ +D+A RR R+L + LPD R ++ ++AK++ + D+D E I M +G+SGSDL +L AA P + +++ D +R +++ DF+ A + SVSSES E W+ +G GS Sbjct: 539 SLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSD-NENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARRRFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAMEP----------------IRDLGDKLMFADFDKIRGIEIKDFQNALLTIKKSVSSESLQKYE--EWSSKFGSNGS 754
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SUR2_SCHPO (Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.442e-28 Identity = 81/229 (35.37%), Postives = 123/229 (53.71%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPG-EHEAMRKMKNEFMVNWDGL-------RTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVD-VRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYG 659 S+TSK+ G+ EK V+A+F +A + SV+FVDE+DS+L R + G EHE+ R++K EF++ W L +T RVLVLAATN P+ +DEA RR +R + LP+ R K + +L + ++ DLE + N+ +GYSGSD+ L AA P N L +S + + P+ ++ FK + + SVS E + E WN+ +G Sbjct: 447 SLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARNDSGNEHESSRRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARRRFVKRTYIPLPEKETRYKHLSHLLHNQVHCLTEEDLEELVNLTEGYSGSDITALAKDAAMGP----------------LRNLGDALLTTSAEMIPPISLNHFKASLRTIRPSVSQEGIHRYE--EWNKQFG 657
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: KATL2_XENTR (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis GN=katnal2 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.221e-26 Identity = 67/159 (42.14%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 3 SITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN--PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVIL------AKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCP 455 +I SKW G+ EK V+ +F LA APS +F+DE++S++ +R GEHE R+MK E +V DGL D + V VLAA+N P++LD A++RRL +R++V+LP R+ +I+ L + EL +D+D + DGYSGSD++ +C AA P Sbjct: 326 TIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTGPGGEHEGSRRMKTELLVQMDGLARSD-DLVFVLAASNLPWELDYAMLRRLEKRILVDLPSKEARQAMIQHWLPPVSNSSGVELRTDLDYSTLGAETDGYSGSDIRLVCKEAAMRP 483
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25 Identity = 61/141 (43.26%), Postives = 93/141 (65.96%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAK--EELASDVDLEGIANMADGYSGSDL 422 + SKW GE E+ V+ +F +A + PS++F+DE+DS+ G R + GE E+ R++K EF+V +G+ KD+ VLVL ATN P+ LD A+ RR +R+ + LP+A R ++ + + K EL S D + +A M DGYSGSD+ Sbjct: 198 LVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSR-SEGESESSRRIKTEFLVQMNGV-GKDESGVLVLGATNIPWTLDSAIRRRFEKRIYIPLPNAHARARMFELNVGKIPSELTSQ-DFKELAKMTDGYSGSDI 335
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: SPAST_NEMVE (Spastin OS=Nematostella vectensis GN=v1g144095 PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24 Identity = 72/208 (34.62%), Postives = 113/208 (54.33%), Query Frame = 3 Query: 39 YVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAK-EELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLXWNELYG 659 +VK++ LAS + S+ +DEVDS+L R GEHE R++K EF+V++DG+ +ER+LV+ ATNRP +LD+A +RR+ +R+ + LPD R+ ++ +LAK S +++ +A M + YSGSDL L AA P N ++ +VR + DF + + + SV E+ + WN LYG Sbjct: 404 FVKSLEDLASILTTSLFTIDEVDSLLTERRE-GEHEHSRRLKTEFLVSFDGVVADPEERILVMGATNRPQELDDAALRRMVKRIHIPLPDKETRKVLLTKLLAKHHNPLSGAEIDRLARMTEHYSGSDLTALARDAALGP--------------IRDLNSDQLKSMAANEVRNITFQDFVNSLQIIRPSVGPETLKAYD--DWNRLYG 594 The following BLAST results are available for this feature:
BLAST of FC923663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 346
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923663 ID=FC923663; Name=FC923663; organism=Citrus clementina; type=EST; length=705bpback to top |