FC923663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 58/150 (38.67%), Postives = 90/150 (60.00%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSML-GRRENPGEHE-AMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTA 443 + + WFGE E V+ +F A + AP V+F DE+DS+ R N G+ A ++ N+ + DG+ TK + V ++ ATNRP +D A++R RL + + + LPD +R I++ L K +A DVDLE +A M +G+SG+DL +C A Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694 HSP 2 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 I SK GE E ++ F A K AP+++F+DE+D++ +RE E R++ ++ + DGL K + V+V+AATNRP +D A+ R R R + + +PDA R +I+++ +LA DVDLE +AN G+ G+DL LC AA Sbjct: 274 IMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-HGEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 58/150 (38.67%), Postives = 90/150 (60.00%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSML-GRRENPGEHE-AMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTA 443 + + WFGE E V+ +F A + AP V+F DE+DS+ R N G+ A ++ N+ + DG+ TK + V ++ ATNRP +D A++R RL + + + LPD +R I++ L K +A DVDLE +A M +G+SG+DL +C A Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694 HSP 2 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 I SK GE E ++ F A K AP+++F+DE+D++ +RE E R++ ++ + DGL K + V+V+AATNRP +D A+ R R R + + +PDA R +I+++ +LA DVDLE +AN G+ G+DL LC AA Sbjct: 274 IMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-HGEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 58/150 (38.67%), Postives = 90/150 (60.00%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSML-GRRENPGEHE-AMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTA 443 + + WFGE E V+ +F A + AP V+F DE+DS+ R N G+ A ++ N+ + DG+ TK + V ++ ATNRP +D A++R RL + + + LPD +R I++ L K +A DVDLE +A M +G+SG+DL +C A Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694 HSP 2 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 I SK GE E ++ F A K AP+++F+DE+D++ +RE E R++ ++ + DGL K + V+V+AATNRP +D A+ R R R + + +PDA R +I+++ +LA DVDLE +AN G+ G+DL LC AA Sbjct: 274 IMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-HGEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 58/150 (38.67%), Postives = 90/150 (60.00%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSML-GRRENPGEHE-AMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTA 443 + + WFGE E V+ +F A + AP V+F DE+DS+ R N G+ A ++ N+ + DG+ TK + V ++ ATNRP +D A++R RL + + + LPD +R I++ L K +A DVDLE +A M +G+SG+DL +C A Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694 HSP 2 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 I SK GE E ++ F A K AP+++F+DE+D++ +RE E R++ ++ + DGL K + V+V+AATNRP +D A+ R R R + + +PDA R +I+++ +LA DVDLE +AN G+ G+DL LC AA Sbjct: 274 IMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-HGEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: TERA_BOVIN (Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 58/150 (38.67%), Postives = 90/150 (60.00%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSML-GRRENPGEHE-AMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTA 443 + + WFGE E V+ +F A + AP V+F DE+DS+ R N G+ A ++ N+ + DG+ TK + V ++ ATNRP +D A++R RL + + + LPD +R I++ L K +A DVDLE +A M +G+SG+DL +C A Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694 HSP 2 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 I SK GE E ++ F A K AP+++F+DE+D++ +RE E R++ ++ + DGL K + V+V+AATNRP +D A+ R R R + + +PDA R +I+++ +LA DVDLE +AN G+ G+DL LC AA Sbjct: 274 IMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-HGEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: TERA_DANRE (Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 I SK GE E ++ F A K AP+++F+DE+D++ +RE E R++ ++ + DGL K + V+V+AATNRP +D A+ R R R + + +PDA R +I+++ +LA DVDLE +AN G+ G+DL LC AA Sbjct: 274 IMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-HGEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419 HSP 2 Score: 97.0561 bits (240), Expect = 1.004e-19 Identity = 55/150 (36.67%), Postives = 90/150 (60.00%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSML-GRRENPGEHE-AMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTA 443 + + WFGE E V+ +F A + AP V+F DE+DS+ R N G+ A ++ N+ + DG+ +K + V ++ ATNRP +D A++R RL + + + LPD +R I++ L K ++ DVDL+ +A M +G+SG+DL +C A Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRA 694
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: CDC48_YEAST (Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 55/149 (36.91%), Postives = 89/149 (59.73%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 + SK GE E ++ F A K AP+++F+DE+DS+ +R+ E R++ ++ + DG+ K + V+V+AATNRP +D A+ R R R + + +PDA R +++R+ +LA DVDLE +A GY G+D+ +LC AA Sbjct: 284 VMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNG-EVERRVVSQLLTLMDGM--KARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAA 429 HSP 2 Score: 85.5001 bits (210), Expect = 3.022e-16 Identity = 53/151 (35.10%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP--GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 + S W+GE E ++ +F A AP+VVF+DE+DS+ R A ++ N+ + DG+ K+ V V+ ATNRP +D A++R RL + + V LPD R I+ L K L ++L IA G+SG+DL + AA Sbjct: 557 LLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNA--KKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAA 705
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.549e-20 Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 I SK GE E ++ F A K APS++F+DE+DS+ +RE E R++ ++ + DGL K + V+V+ ATNRP +D A+ R R R + + +PD R +++R+ +L+ DVDLE IA GY G+DL LC AA Sbjct: 278 IMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT-HGEVERRIVSQLLTLMDGL--KSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423 HSP 2 Score: 92.4337 bits (228), Expect = 2.472e-18 Identity = 51/150 (34.00%), Postives = 85/150 (56.67%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP--GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTA 443 + + WFGE E V+ +F A + AP V+F DE+DS+ +R + A ++ N+ + DG+ K + V ++ ATNRP +D A++R RL + + + LPD +R +I + L K +A +VDL +A G+SG+D+ +C A Sbjct: 551 LLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAK--KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRA 698
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.022e-20 Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 I SK GE E ++ F A K APS++F+DE+DS+ +RE E R++ ++ + DGL K + V+V+ ATNRP +D A+ R R R + + +PD R +++R+ +LA DVDLE I+ GY G+DL LC AA Sbjct: 277 IMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNG-EVERRIVSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAA 422 HSP 2 Score: 94.7449 bits (234), Expect = 4.981e-19 Identity = 52/150 (34.67%), Postives = 84/150 (56.00%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHE--AMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTA 443 + + WFGE E V+ +F A + AP V+F DE+DS+ +R N A ++ N+ + DG+ K + V ++ ATNRP +D A++R RL + + + LPD +R I + L K +A DVD+ +A G+SG+D+ +C A Sbjct: 550 LLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAK--KTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRA 697
BLAST of FC923663 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.022e-20 Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 446 I SK GE E ++ F A K APS++F+DE+DS+ +RE E R++ ++ + DGL K + V+V+ ATNRP +D A+ R R R + + +PD R +++R+ +LA DVDLE I+ GY G+DL LC AA Sbjct: 277 IMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNG-EVERRIVSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAA 422 HSP 2 Score: 92.8189 bits (229), Expect = 1.893e-18 Identity = 51/151 (33.77%), Postives = 84/151 (55.63%), Query Frame = 3 Query: 6 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHE---AMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTA 443 + + WFGE E V+ +F A + AP V+F DE+DS+ +R + A ++ N+ + DG+ K + V ++ ATNRP +D A++R RL + + + LPD +R I + L K +A DVD+ +A G+SG+D+ +C A Sbjct: 550 LLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAK--KTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRA 698 The following BLAST results are available for this feature:
BLAST of FC923663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 346
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923663 ID=FC923663; Name=FC923663; organism=Citrus clementina; type=EST; length=705bpback to top |