FC923676

Overview
NameFC923676
Unique NameFC923676
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: NIT2A_XENLA (Omega-amidase NIT2-A OS=Xenopus laevis GN=nit2a PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 76/244 (31.15%), Postives = 114/244 (46.72%), Query Frame = 3
Query:    3 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGV-VIPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDGPG---YQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            +S +QF  +   S NL  A +L++ A  KGA I+ + E F   Y        F + A+      T L + ++AKE G+ +I  S  EE     YN+ A+   DG+ L  +RK H+   D PG   +QE    +PGD+ F VF T + K+GV IC+D  F E A+    +G ++L YP A              HW  + +  A  N V +  ++    E       K+    +G+S I  P GE
Sbjct:    6 LSLVQFLVSPVKSDNLNRACKLIKEAAQKGAQIVALPECFNSPY----GTTYFPEYAEKIPGESTEL-LSQVAKECGIYLIGGSIPEEDCGKLYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDS-FSVFDTPYCKVGVGICYDIRFAELAQIYANKGCQLLVYPGAFNM------TTGPAHWELLQRARALDNQVYVATASPARDE-------KASYVAWGHSTIVSPWGE 230          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: BUP1_HUMAN (Beta-ureidopropionase OS=Homo sapiens GN=UPB1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 72/243 (29.63%), Postives = 110/243 (45.27%), Query Frame = 3
Query:   30 DDVSTNLATAERLVRAAHGKGANIILIQELFE-GYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVSFFE---EANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQIT-------------FYGNSFIAXP 707
            + VS      + +V  A   G NII  QE +   + FC  ++  + + A+  +D PT    Q+LAK   +V+     E   E  +  +N+  +I   G+ LG  RK+HIP    + E  Y+  G+ G  VFQT+F +I V IC+ +  P       + GAEI+F P+A        G  S   W    +  A  N     A NR+G     T+H  ++ T             FYG+S++A P
Sbjct:   91 EQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSINGAEIIFNPSA------TIGALSESLWPIEARNAAIANHCFTCAINRVG-----TEHFPNEFTSGDGKKAHQDFGYFYGSSYVAAP 322          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: BUP1_MOUSE (Beta-ureidopropionase OS=Mus musculus GN=Upb1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.361e-16
Identity = 71/240 (29.58%), Postives = 108/240 (45.00%), Query Frame = 3
Query:   30 DDVSTNLATAERLVRAAHGKGANIILIQELFE-GYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVSFFE---EANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQ----HGKSQI----TFYGNSFIAXPTG 713
            + VS    + E +   A   G NII  QE +   + FC  ++  + + A+  +D  T    Q+LAK+  +V+     E   E     +N+  +I   G  +G  RK+HIP    + E  Y+  G+ G  VFQT+F +I V IC+ +  P       + GAEI+F P+A   E       S   W    +  A  N     A NR+G+E    +     GK        FYG+S++A P G
Sbjct:   91 EQVSALHKSIEEIAEVAAMCGVNIICFQEAWNMPFAFCTREKLPWTEFAESAEDGLTTRFCQKLAKKHNMVVVSPILERDREHGGVLWNTAVVISNSGLVMGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSINGAEIIFNPSATIGEL------SESLWPIEARNAAIANHCFTCALNRVGQEHFPNEFTSGDGKKAHHDLGYFYGSSYVAAPDG 324          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: BUP1_RAT (Beta-ureidopropionase OS=Rattus norvegicus GN=Upb1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16
Identity = 72/246 (29.27%), Postives = 111/246 (45.12%), Query Frame = 3
Query:   30 DDVSTNLATAERLVRAAHGKGANIILIQELFE-GYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVSFFEEANNAH----YNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQIT-------------FYGNSFIAXPTG 713
            + VS      E +   A   G NII  QE +   + FC  ++  + + A+  +D  T    Q+LAK+  +V+ +S   E +  H    +N+  +I   G  +G  RK+HIP    + E  Y+  G+ G  VFQT+F +I V IC+ +  P       + GAEI+F P+A   E       S   W    +  A  N     A NR+G+E     H  ++ T             FYG+S++A P G
Sbjct:   91 EQVSALHKRIEEIAEVAAMCGVNIICFQEAWNMPFAFCTREKLPWTEFAESAEDGLTTRFCQKLAKKHNMVV-ISPILERDRDHGGVLWNTAVVISNSGLVMGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYSVNGAEIIFNPSATIGEL------SESMWPIEARNAAIANHCFTCALNRVGQE-----HYPNEFTSGDGKKAHHDLGYFYGSSYVAAPDG 324          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: NIT2_RAT (Omega-amidase NIT2 OS=Rattus norvegicus GN=Nit2 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.172e-15
Identity = 70/244 (28.69%), Postives = 112/244 (45.90%), Query Frame = 3
Query:    3 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGV-VIPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDGPG---YQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            ++ +Q   +   S N+  A  LVR A  +GANI+ + E F   Y        F + A+      T  K+ E+AKE  + +I  S  EE +   YN+ A+   DG+ L  +RK H+   D PG   +QE    +PGD+ F  F T + ++G+ IC+D  F E A+    +G ++L YP A              HW  + +  A  N V +  ++    E       K+    +G+S +  P G+
Sbjct:    6 LALIQLQVSSIKSDNITRACSLVREAAKQGANIVSLPECFNSPY----GTNYFPEYAEKIPGEST-KKLSEVAKENSIYLIGGSIPEEDDGKLYNTCAVFGPDGNLLVKHRKIHLFDIDVPGKITFQESKTLSPGDS-FSTFDTPYCRVGLGICYDMRFAELAQIYARRGCQLLVYPGAFNM------TTGPAHWELLQRARAVDNQVYVATASPARDE-------KASYVAWGHSTVVDPWGQ 230          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: NIT2_MOUSE (Omega-amidase NIT2 OS=Mus musculus GN=Nit2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15
Identity = 69/244 (28.28%), Postives = 109/244 (44.67%), Query Frame = 3
Query:    3 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGV-VIPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDGPG---YQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            ++ +Q   +   S NL  A  LVR A  +GANI+ + E F   Y        +F          +  K+ E+AKE  + +I  S  EE     YN+ ++   DGS L  +RK H+   D PG   +QE    +PGD+ F  F T + K+G+ IC+D  F E A+    +G ++L YP A              HW  + +  A  N V +  ++         +  K+    +G+S +  P G+
Sbjct:    6 LALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPY-----GTTYFPDYAEKIPGESTQKLSEVAKESSIYLIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDS-FSTFDTPYCKVGLGICYDMRFAELAQIYAQRGCQLLVYPGAFNL------TTGPAHWELLQRARAVDNQVYVATAS-------PARDDKASYVAWGHSTVVDPWGQ 230          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: NIT2_HUMAN (Omega-amidase NIT2 OS=Homo sapiens GN=NIT2 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15
Identity = 66/244 (27.05%), Postives = 108/244 (44.26%), Query Frame = 3
Query:    3 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGV-VIPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDGPG---YQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            ++ +Q   +   S N+  A   +R A  +GA I+ + E F   Y  +     +F          +  K+ E+AKE  + +I  S  EE     YN+ A+   DG+ L  YRK H+   D PG   +QE    +PGD+ F  F T + ++G+ IC+D  F E A+    +G ++L YP A              HW  + +  A  N V +  ++         +  K+    +G+S +  P GE
Sbjct:    6 LALIQLQISSIKSDNVTRACSFIREAATQGAKIVSLPECFNSPYGAK-----YFPEYAEKIPGESTQKLSEVAKECSIYLIGGSIPEEDAGKLYNTCAVFGPDGTLLAKYRKIHLFDIDVPGKITFQESKTLSPGDS-FSTFDTPYCRVGLGICYDMRFAELAQIYAQRGCQLLVYPGAFNL------TTGPAHWELLQRSRAVDNQVYVATAS-------PARDDKASYVAWGHSTVVNPWGE 230          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: NIT2_BOVIN (Omega-amidase NIT2 OS=Bos taurus GN=NIT2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15
Identity = 69/244 (28.28%), Postives = 111/244 (45.49%), Query Frame = 3
Query:    3 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGV-VIPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDGPG---YQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            ++ +Q   +   S NL  A  L+R A  +GA I+ + E F   Y  +     +F          +  K+ E+AKE  + VI  S  E+     YN+ A+   DG+ L  +RK H+   D PG   +QE    +PGD+ F +F T + ++G+ IC+D  F E A+    +G ++L YP A              HW  + +G A  N V +  ++    E       K+    +G+S +  P GE
Sbjct:    6 LALIQLQVSSIKSENLTRACGLIREASKQGAQIVSLPECFNSPYGTK-----YFPDYAEKIPGDSTQKLSEVAKECSMYVIGGSIPEKDAGKLYNTCAVFGPDGTLLVKHRKLHLFDIDVPGKITFQESETLSPGDS-FSLFDTPYCRVGLGICYDIRFAELAQIYAQRGCQLLVYPGAFNL------TTGPAHWELLQRGRAVDNQVYVATASPARDE-------KASYVAWGHSTVVNPWGE 230          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: NIT1_BOVIN (Nitrilase homolog 1 OS=Bos taurus GN=NIT1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15
Identity = 73/249 (29.32%), Postives = 111/249 (44.58%), Query Frame = 3
Query:    3 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGVVIPVSFFEEANNAH------YNSIAIIDADGSDLGLYRKSHIPD------GPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTG 713
            V+  Q   T D   N  T   L+R A   GA +  + E F+   F     E   + ++P   +  + +  +LA+E G+ + +  F E           YN   I++  GS +  YRK+H+ D      GP  +E     PG +      T   KIG+AIC+D  FPE + A+V  GAEIL YP+A GS      +    HW  +++  A      +VA+ + G+      H K     YG+S +  P G
Sbjct:   50 VAVCQVTSTPDKEQNFKTCAELIREAARLGACLAFLPEAFD---FIARDPEETRRLSEPLSGN-LLEEYTQLARECGLWLSLGGFHERGQDWEQTQKIYNCHVIMNNMGSVVATYRKTHLCDVEIPGQGP-MRESNSTIPGPSLESPISTPAGKIGLAICYDMRFPELSLALVQAGAEILTYPSAFGS------VTGPAHWEVLLRARAIETQCYVVAAAQCGR-----HHEKR--ASYGHSMVVDPWG 280          
BLAST of FC923676 vs. ExPASy Swiss-Prot
Match: NIT2_DANRE (Omega-amidase NIT2 OS=Danio rerio GN=nit2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15
Identity = 64/230 (27.83%), Postives = 105/230 (45.65%), Query Frame = 3
Query:   45 NLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREVFFQRAKPYKDHPTILKMQELAKELGV-VIPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHI--PDGPG---YQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGTNVVPLVASNRIGKEIIETQHGKSQITFYGNSFIAXPTGE 716
            NL  A+ LV+ A G+GA ++++ E F   Y        FF+         +   + E AK+ G+ ++  S  EE     YN+ ++   DG+ L  +RK H+   D PG   +QE    +PG +   +F+T + K+GV IC+D  F E A+    +G ++L YP A              HW  + +G A  N V +  ++    E        +    +G+S +  P GE
Sbjct:   20 NLGRAQTLVKEAAGQGAKVVVLPECFNSPYGTG-----FFKEYAEKIPGESTQVLSETAKKCGIYLVGGSIPEEDGGKLYNTCSVFGPDGTLLVTHRKIHLFDIDVPGKIRFQESETLSPGKS-LSMFETPYCKVGVGICYDIRFAELAQIYAKKGCQLLVYPGAFNM------TTGPAHWELLQRGRAVDNQVYVATASPARDE-------TASYVAWGHSSVINPWGE 230          
The following BLAST results are available for this feature:
BLAST of FC923676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
NIT2A_XENLA4.758e-1731.15Omega-amidase NIT2-A OS=Xenopus laevis GN=nit2a PE... [more]
BUP1_HUMAN4.758e-1729.63Beta-ureidopropionase OS=Homo sapiens GN=UPB1 PE=1... [more]
BUP1_MOUSE2.361e-1629.58Beta-ureidopropionase OS=Mus musculus GN=Upb1 PE=2... [more]
BUP1_RAT6.871e-1629.27Beta-ureidopropionase OS=Rattus norvegicus GN=Upb1... [more]
NIT2_RAT1.172e-1528.69Omega-amidase NIT2 OS=Rattus norvegicus GN=Nit2 PE... [more]
NIT2_MOUSE1.531e-1528.28Omega-amidase NIT2 OS=Mus musculus GN=Nit2 PE=1 SV... [more]
NIT2_HUMAN2.611e-1527.05Omega-amidase NIT2 OS=Homo sapiens GN=NIT2 PE=1 SV... [more]
NIT2_BOVIN4.453e-1528.28Omega-amidase NIT2 OS=Bos taurus GN=NIT2 PE=2 SV=1[more]
NIT1_BOVIN4.453e-1529.32Nitrilase homolog 1 OS=Bos taurus GN=NIT1 PE=2 SV=... [more]
NIT2_DANRE9.921e-1527.83Omega-amidase NIT2 OS=Danio rerio GN=nit2 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC31707G05EF StrClemenN Citrus clementina cDNA clone C31707G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923676 ID=FC923676; Name=FC923676; organism=Citrus clementina; type=EST; length=717bp
GGGTGTCAGCTCTGCAATTCGCTTGCACCGACGATGTCTCTACTAATCTT
GCCACCGCTGAAAGGCTGGTCAGAGCTGCTCATGGAAAAGGTGCAAACAT
AATTCTTATTCAGGAACTCTTTGAGGGTTATTATTTCTGTCAAGCACAAA
GAGAGGTCTTCTTTCAGCGTGCTAAGCCATATAAGGACCATCCCACAATT
CTCAAGATGCAGGAGCTTGCGAAAGAGCTAGGTGTAGTGATACCAGTTAG
CTTCTTTGAAGAGGCCAATAATGCCCATTACAATTCAATAGCGATCATTG
ATGCTGATGGATCTGATCTTGGACTCTACAGGAAGTCCCATATCCCAGAT
GGACCAGGCTATCAGGAAAAGTTCTACTTCAATCCAGGGGACACTGGCTT
CAAGGTTTTCCAAACTAAATTTGCAAAAATTGGAGTTGCAATATGCTGGG
ATCAGTGGTTTCCAGAGGCAGCTCGGGCTATGGTTTTACAAGGTGCTGAG
ATATTGTTTTACCCTACTGCTATTGGTTCTGAACCTCAAGATGATGGACT
TGATTCTCGTGATCACTGGAGGCGAGTGATGCAAGGGCATGCTGGGACTA
ATGTAGTACCTCTAGTTGCTTCGAATCGCATTGGGAAAGAAATAATTGAG
ACACAGCACGGAAAGAGTCAAATCACATTCTACGGGAACTCCTTTATTGC
ANGCCCAACCGGGGAGA
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