FC923719

Overview
NameFC923719
Unique NameFC923719
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.874e-26
Identity = 69/199 (34.67%), Postives = 111/199 (55.78%), Query Frame = 1
Query:   76 FSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNPGY 672
            F T YK  M  G  + +K++   ++    G    F++ELE+LG + +  ++    Y  +  S  L Y+Y P G+L + LH   E  LDW SR +I +G A+GL++LH   S  I+  D+ + NI L    E ++ D  L K+++  +S    + VAG+ GY+ PEY  + R T   +VYSFGV++LE+L+GK   +  +
Sbjct:  317 FGTVYKLAMDDGKVFALKRILKLNE----GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHERGEQ-LDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASF 509          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.200e-25
Identity = 71/207 (34.30%), Postives = 111/207 (53.62%), Query Frame = 1
Query:   55 NVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLH--GCLENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI------DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 651
            N+++ +R    YKA +P G +  +K+L+            +F  E+  LG+L + N++  L Y +  D   L Y++   GTLF  LH  G  +  LDW +R +I VG A+GL +LH     P L   +S+  I L    + +I D  L K++      D S + G L    G +GY+ PEY+ TM  ++ G+VY FG++LLEL+TG+
Sbjct:  305 NIDVSSRTGVSYKADLPDGSALAVKRLSACGF-----GEKQFRSEMNKLGELRHPNLVPLLGYCVVEDERLLVYKHMVNGTLFSQLHNGGLCDAVLDWPTRRAIGVGAAKGLAWLHHGCQPPYLHQFISSNVILLDDDFDARITDYGLAKLVGSRDSNDSSFNNGDL----GELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQ 502          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.873e-25
Identity = 67/216 (31.02%), Postives = 121/216 (56.02%), Query Frame = 1
Query:   67 KTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGC---LENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV-AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNPGYE---LAKWVL 693
            K  FS  +K ++  G    +K+   +  + +  S  +F  EL++L +L++++++  L Y        L YE+   G+L+  LHG    L+  L+WA R +IAV  A+G+ +LHG+   P++  D+ + NI +      ++ D  L  ++ P+ S   LS + AG++GY+ PEY     +T   +VYSFGV+LLE+L+G+ A++  +E   + +W +
Sbjct:  513 KGSFSCVFKGILRDGTVVAVKRAIKASDVKK--SSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGL-SILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQFEEGNIVEWAV 725          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.400e-25
Identity = 78/237 (32.91%), Postives = 124/237 (52.32%), Query Frame = 1
Query:   10 NIDFTKAMEAVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCL-ENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAV-NPGYE-------LAKWV 690
            N D    ++A A  L    K  F T YKAV+    +  +K+L        + S  +F++++E++GK++ +SN +  LAY  + D   L Y+Y  KG+LF ++HG   +  +DW +R  IA G ++ +++LH   S   +  D+ + NI L    EP + D  L  + +    T        ++GY  PE   T RV+   +VYSFGV++LE+LTGKT +  PG E       L +WV
Sbjct:  339 NFDLEDLLKASAEVLG---KGSFGTAYKAVLEDTTAVVVKRLREV-----VASKKEFEQQMEIVGKINQHSNFVPLLAYYYSKDEKLLVYKYMTKGSLFGIMHGNRGDRGVDWETRMKIATGTSKAISYLH---SLKFVHGDIKSSNILLTEDLEPCLSDTSLVTLFNLPTHTPR------TIGYNAPEVIETRRVSQRSDVYSFGVVILEMLTGKTPLTQPGLEDERVVIDLPRWV 558          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.092e-24
Identity = 61/201 (30.35%), Postives = 108/201 (53.73%), Query Frame = 1
Query:   49 PLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTL-FDVLHGCLENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 648
            P+N   +  F   YK   PSG+   +K+L+ +          +F+ E+ V+ KL + N++  L Y L  +   L YE+ P  +L + +    ++  LDW+ RY I  G+A+G+ +LH  +   I+  DL   NI L +   P++ D  + ++    ++  +   V G+ GY+ PEYA   + +M  +VYSFGV++LE+++G
Sbjct:  346 PINKLGQGGFGEVYKGTFPSGVQVAVKRLSKNSG----QGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSG 542          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.092e-24
Identity = 67/212 (31.60%), Postives = 110/212 (51.89%), Query Frame = 1
Query:   25 KAMEAVAN---PLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLH-GCLENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 648
            KA+EA  N   P+N   +  F   YK  + SG+   +K+L+ +          +F+ E+ V+ KL + N++  L Y L  +   L YE+ P  +L   L    ++  LDW  RY I  G+A+G+ +LH  +   I+  DL   NI L     P+I D  + ++    ++      V G+ GY+ PEYA   + +M  +VYSFGV++LE+++G
Sbjct:  317 KAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSKTSG----QGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISG 524          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.426e-24
Identity = 66/217 (30.41%), Postives = 112/217 (51.61%), Query Frame = 1
Query:   25 KAMEAVANPL---NVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTL-FDVLHGCLENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVN 663
            KA+EA  N     N   +  F   YK + PSG+   +K+L+ +          +F  E+ V+ KL + N++  L + L  D   L YE+ P  +L + +    +++ LDW  RY I  G+A+G+ +LH  +   I+  DL   NI L      +I D  + ++    ++  +   + G+ GY+ PEYA   + +M  +VYSFGV++LE+++GK   N
Sbjct:  342 KAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSG----QGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSN 554          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.862e-24
Identity = 73/219 (33.33%), Postives = 108/219 (49.32%), Query Frame = 1
Query:   76 FSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLEN--ALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVN-----PGYELAKWVLRNSAQQ 711
            F   YKA +P G    IK+L+            +F  E+E L +  + N++  L Y    +   L Y Y   G+L   LH  ++   +LDW +R  IA G A+GL +LH      IL  D+ + NI L       + D  L ++I P   T   + + G++GYIPPEY      T  G+VYSFGV+LLELLTG+  ++        +L  WVL+   ++
Sbjct:  754 FGLVYKATLPDGTKVAIKRLSGDTGQMD----REFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPY-DTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEK 967          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.862e-24
Identity = 72/200 (36.00%), Postives = 108/200 (54.00%), Query Frame = 1
Query:   76 FSTYYKAVMPS-GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCL--ENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST-VAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVN 663
            F   YK  + S G    +K+L+ +     L  + +F  E+ +L  L + N++  + Y    D   L YE+ P G+L D LH     + ALDW  R  IA G A+GL FLH   + P++  D  + NI L     P++ D  L K + P+     +ST V G+ GY  PEYA T ++T+  +VYSFGV+ LEL+TG+ A++
Sbjct:   97 FGRVYKGRLDSTGQVVAVKQLDRNG----LQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAK-LGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAID 291          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.148e-24
Identity = 72/203 (35.47%), Postives = 107/203 (52.71%), Query Frame = 1
Query:   76 FSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGC--LENA-----LDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVN 663
            +   Y  V+ SG +  IKKL+ S +        +F  ++ ++ +L + NV+  L Y +      L YEYAP G+L D+LHG   ++ A     L WA R  IAVG A+GL +LH      I+  D+ + NI L      +I D +L        +    + V G+ GY  PEYA T +++   +VYSFGV+LLELLTG+  V+
Sbjct:   79 YGRVYHGVLKSGRAAAIKKLDSSKQ-----PDREFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVD 276          
The following BLAST results are available for this feature:
BLAST of FC923719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 264
Match NameE-valueIdentityDescription
FEI1_ARATH9.874e-2634.67LRR receptor-like serine/threonine-protein kinase ... [more]
Y1719_ARATH2.200e-2534.30Probable inactive receptor kinase At1g27190 OS=Ara... [more]
CRI4_MAIZE2.873e-2531.02Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y5516_ARATH6.400e-2532.91Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
CRK20_ARATH1.092e-2430.35Putative cysteine-rich receptor-like protein kinas... [more]
CRK19_ARATH1.092e-2431.60Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK4_ARATH1.426e-2430.41Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
PSKR1_DAUCA1.862e-2433.33Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
PBS1_ARATH1.862e-2436.00Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
PTI1_SOLLC4.148e-2435.47Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]

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Properties
Property NameValue
Genbank descriptionC31708C01EF StrClemenN Citrus clementina cDNA clone C31708C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923719 ID=FC923719; Name=FC923719; organism=Citrus clementina; type=EST; length=728bp
CACAGGTCAAATATTGACTTCACCAAAGCCATGGAAGCAGTAGCTAATCC
TCTGAACGTTGAGCTCAAAACTAGGTTTTCAACCTATTACAAAGCTGTCA
TGCCTTCTGGAATGAGCTACTTCATTAAGAAGCTTAACTGGAGTGACAAG
ATATTCCAACTGGGTAGCCATCATAAATTCGACAAAGAGCTAGAGGTCTT
GGGGAAGCTGAGCAACTCAAATGTCATGACGCCTCTGGCTTATGTTTTGG
CTTCGGATAGTGCATATCTATTCTATGAATATGCTCCAAAGGGTACCCTT
TTTGATGTTCTTCATGGCTGCCTGGAAAATGCTTTAGATTGGGCTAGCCG
ATATAGTATAGCAGTTGGAGTAGCTCAGGGTCTCACTTTTCTACATGGAT
TCACCTCTAATCCAATTCTCCTCCTCGATTTATCTACCAGAAACATTTTC
CTTAAGTCACTGAAAGAGCCACAAATTGGAGATATTGAGCTCTGCAAGGT
GATTGATCCCTCAAAGAGCACTGGCAGCCTCTCCACAGTTGCTGGGTCAG
TCGGCTATATTCCTCCAGAGTATGCTTACACAATGAGGGTAACAATGGCG
GGGAATGTTTACAGCTTTGGAGTTATTCTTCTGGAGTTGCTGACAGGAAA
GACTGCAGTTAACCCAGGGTATGAATTAGCCAAGTGGGTACTACGTAACT
CAGCACAGCAAGATAAGTTGGATCACAT
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