FC923719

Overview
NameFC923719
Unique NameFC923719
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.823e-23
Identity = 71/233 (30.47%), Postives = 122/233 (52.36%), Query Frame = 1
Query:   55 NVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK--TAVNPGYE-----LAKWV---LRNSAQQDKLD 723
            N+ + +R    YKA +P G +  +K+L+   ++    S  +F  E+  LG++ + N++  L + +  D   L Y++   GTL+  L    +  +DW +R  +AVG A+GL +LH       +   +S+  I L    + ++ D  L K++    S  S S   G  GY+ PEY+ TM  +++G+VY FG++LLE++TG+    +N G E     L +WV   L N   +D +D
Sbjct:  299 NIVVSSRSGVSYKADLPDGSTLEVKRLSSCCEL----SEKQFRSEINKLGQIRHPNLVPLLGFCVVEDEILLVYKHMANGTLYSQLQ---QWDIDWPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARVIDYGLGKLVSSQDSKDS-SFSNGKFGYVAPEYSSTMVASLSGDVYGFGIVLLEIVTGQKPVLINNGEEGFKESLVEWVSKHLSNGRSKDAID 523          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.823e-23
Identity = 65/194 (33.51%), Postives = 101/194 (52.06%), Query Frame = 1
Query:   82 TYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCL-ENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAV 660
            T YK ++P      IKK    D         +F  E+ VL ++++ NV+  L   L ++   L YE+   G+LFD LHG +  ++L W  R  IA+ VA  + +LH   S PI+  D+ T NI L      ++ D    K + P       + V G++GY+ PEY  T  +    +VYSFGV+L+EL++G+ A+
Sbjct:  121 TVYKGILPDNSIVAIKKTRLGDN----NQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITGGSLFDHLHGSMFVSSLTWEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLDENLTAKVADFGASK-LKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKAL 309          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.823e-23
Identity = 56/193 (29.02%), Postives = 105/193 (54.40%), Query Frame = 1
Query:   76 FSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTL-FDVLHGCLENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 651
            F   YK  +P+G+   +K+L+ +          +F  E+ V+ KL + N++  L + L  +   L YE+    +L + +    +++ LDW +RY I  G+A+G+ +LH  +   I+  DL   NI L +   P++ D  + ++ +  ++      V G+ GY+ PEYA   + +M  +VYSFGV++LE+++G+
Sbjct:  351 FGQVYKGTLPNGVQVAVKRLSKTSG----QGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGR 539          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.823e-23
Identity = 66/189 (34.92%), Postives = 98/189 (51.85%), Query Frame = 1
Query:  169 HHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNPG-----YELAKWVLRNSAQQDKL 720
            H ++  E+  LG+LS+ N++  + Y    ++  L YE+ PKG+L + L       L WA R  +AVG A+GLTFLH   S  ++  D    NI L +    ++ D  L K      +T   + V G+ GY  PEY  T R+T   +VYSFGV+LLEL++G+ A++       Y L  W       + KL
Sbjct:  134 HKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKSQ-VIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKL 321          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22
Identity = 60/193 (31.09%), Postives = 103/193 (53.37%), Query Frame = 1
Query:   76 FSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTL-FDVLHGCLENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 651
            F   Y+  + SG    +K+L+   K    G+  +F  E  ++ KL + N++  L + L  +   L YE+ P  +L + +     +  LDW  RY+I  G+A+G+ +LH  +   I+  DL   NI L +   P+I D  + ++    +S  +   +AG+ GY+ PEYA     +M  +VYSFGV++LE+++GK
Sbjct:  356 FGEVYRGKLSSGPEVAVKRLS---KTSGQGAE-EFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGK 544          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.334e-22
Identity = 64/209 (30.62%), Postives = 102/209 (48.80%), Query Frame = 1
Query:   76 FSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI----DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNPGYELAKWV 690
            +   YK  +P G+   +K+         L    +F  E+E+L +L + N+++ L Y        L YEY P G+L D L       L  A R  IA+G A+G+ +LH     PI+  D+   NI L S   P++ D  + K+I       +     + V G+ GY+ PEY  + R+T   +VYS G++ LE+LTG   ++ G  + + V
Sbjct:  642 YGKVYKGHLPGGLVVAVKRAEQGS----LQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISHGRNIVREV 846          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.334e-22
Identity = 72/217 (33.18%), Postives = 111/217 (51.15%), Query Frame = 1
Query:   67 KTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA---LDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK-----TAVNPGYELAKWVL 693
            K    T YKAV+  G +  +K+L        + S  +F+ ++EV+GK+ + NV+   AY  + D   L +++ P G+L  +LHG   +    LDW +R  IA+  A+GL  LH   S  ++  ++   NI L   ++  + D  L ++   S     L+      GY  PE   T +VT   +VYSFGV+LLELLTGK     +    G +L +WVL
Sbjct:  359 KGSVGTSYKAVLEEGTTVVVKRLK-----DVMASKKEFETQMEVVGKIKHPNVIPLRAYYYSKDEKLLVFDFMPTGSLSALLHGSRGSGRTPLDWDNRMRIAITAARGLAHLH--VSAKLVHGNIKASNILLHPNQDTCVSDYGLNQLFSNSSPPNRLA------GYHAPEVLETRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVL 562          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.334e-22
Identity = 68/199 (34.17%), Postives = 107/199 (53.77%), Query Frame = 1
Query:   76 FSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHK---FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTL----FDVLHGCLENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 651
            F T YK V+P G    +K+L ++++       H+   F  E+ ++  + + N++  L    +   + L YEY    +L    FDV  G     LDW  RY+I VG A+GL +LH  +S  I+  D+   NI L S  + +I D  L +     KS  S + +AG++GY+ PEY    ++T   +VYSFGV++LE++TGK
Sbjct:  336 FGTVYKGVLPDGRDIAVKRLFFNNR-------HRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRG---KTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHIS-TAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGK 523          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.334e-22
Identity = 58/193 (30.05%), Postives = 101/193 (52.33%), Query Frame = 1
Query:   76 FSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTL-FDVLHGCLENALDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 651
            F   YK    +G    +K+L+ S          +F  E+ V+ KL + N++  L + +      L YEY P  +L + +     +N LDW  RY +  G+A+G+ +LH  +   I+  DL   NI L +   P++ D  L ++    ++  + S + G+ GY+ PEYA   + ++  +VYSFGV++LE+++GK
Sbjct:  348 FGEVYKGTFSNGTEVAVKRLSKSSG----QGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFDPAKQNQLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIHGQFSVKSDVYSFGVLVLEIISGK 536          
BLAST of FC923719 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22
Identity = 68/212 (32.08%), Postives = 104/212 (49.06%), Query Frame = 1
Query:   76 FSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA--LDWASRYSIAVGVAQGLTFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAV-----NPGYELAKWV 690
            F   YKA + +G    +KKL     + +     +F  E+EVL +  + N++    Y +   +  L Y +   G+L   LH   E    LDW  R +I  G + GL ++H      I+  D+ + NI L    +  + D  L ++I P + T   + + G++GYIPPEY      T+ G+VYSFGV++LELLTGK  +         EL  WV
Sbjct:  814 FGLVYKATLDNGTKLAVKKLTGDYGMME----KEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYR-THVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPMEVFRPKMSRELVAWV 1020          
The following BLAST results are available for this feature:
BLAST of FC923719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 264
Match NameE-valueIdentityDescription
Y1699_ARATH7.823e-2330.47Probable LRR receptor-like serine/threonine-protei... [more]
WAKLS_ARATH7.823e-2333.51Putative wall-associated receptor kinase-like 16 O... [more]
CRK5_ARATH7.823e-2329.02Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
APK2A_ARATH7.823e-2334.92Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
CRK35_ARATH1.022e-2231.09Putative cysteine-rich receptor-like protein kinas... [more]
Y5374_ARATH1.334e-2230.62Probable LRR receptor-like serine/threonine-protei... [more]
Y2267_ARATH1.334e-2233.18Probable inactive receptor kinase At2g26730 OS=Ara... [more]
CRK2_ARATH1.334e-2234.17Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
CRK15_ARATH1.334e-2230.05Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
PSYR1_ARATH1.743e-2232.08Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionC31708C01EF StrClemenN Citrus clementina cDNA clone C31708C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923719 ID=FC923719; Name=FC923719; organism=Citrus clementina; type=EST; length=728bp
CACAGGTCAAATATTGACTTCACCAAAGCCATGGAAGCAGTAGCTAATCC
TCTGAACGTTGAGCTCAAAACTAGGTTTTCAACCTATTACAAAGCTGTCA
TGCCTTCTGGAATGAGCTACTTCATTAAGAAGCTTAACTGGAGTGACAAG
ATATTCCAACTGGGTAGCCATCATAAATTCGACAAAGAGCTAGAGGTCTT
GGGGAAGCTGAGCAACTCAAATGTCATGACGCCTCTGGCTTATGTTTTGG
CTTCGGATAGTGCATATCTATTCTATGAATATGCTCCAAAGGGTACCCTT
TTTGATGTTCTTCATGGCTGCCTGGAAAATGCTTTAGATTGGGCTAGCCG
ATATAGTATAGCAGTTGGAGTAGCTCAGGGTCTCACTTTTCTACATGGAT
TCACCTCTAATCCAATTCTCCTCCTCGATTTATCTACCAGAAACATTTTC
CTTAAGTCACTGAAAGAGCCACAAATTGGAGATATTGAGCTCTGCAAGGT
GATTGATCCCTCAAAGAGCACTGGCAGCCTCTCCACAGTTGCTGGGTCAG
TCGGCTATATTCCTCCAGAGTATGCTTACACAATGAGGGTAACAATGGCG
GGGAATGTTTACAGCTTTGGAGTTATTCTTCTGGAGTTGCTGACAGGAAA
GACTGCAGTTAACCCAGGGTATGAATTAGCCAAGTGGGTACTACGTAACT
CAGCACAGCAAGATAAGTTGGATCACAT
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