FC923767

Overview
NameFC923767
Unique NameFC923767
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ROCA_BACCR (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rocA PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.496e-23
Identity = 74/239 (30.96%), Postives = 123/239 (51.46%), Query Frame = 3 
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQLTIV-EISPTADIVKEELFAPVLYVMK 701
            ALV GN V+ K                 EV E   LP  +     G G+E+G  +   PR   VSFTGS  VG+ + +   +         + + E+ G +          +LA +S++ +A G +GQ+C+ C R +IHE +Y  VL++ V++ K++ + +P   GT +GP++    +  F+K +    I  + G+IL GG   +S+G F+Q TIV +++  A ++KEE+F PV+   K
Sbjct:  195 ALVSGNTVLLKPASTTPVVAAKFM----EVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFVSFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVN---DQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCK 426
[Close]
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ROCA_BACC4 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain B4264) GN=rocA PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.496e-23
Identity = 74/239 (30.96%), Postives = 123/239 (51.46%), Query Frame = 3 
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQLTIV-EISPTADIVKEELFAPVLYVMK 701
            ALV GN V+ K                 EV E   LP  +     G G+E+G  +   PR   VSFTGS  VG+ + +   +         + + E+ G +          +LA +S++ +A G +GQ+C+ C R +IHE +Y  VL++ V++ K++ + +P   GT +GP++    +  F+K +    I  + G+IL GG   +S+G F+Q TIV +++  A ++KEE+F PV+   K
Sbjct:  195 ALVSGNTVLLKPASTTPVVAAKFM----EVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFVSFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVN---DQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCK 426
[Close]
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ROCA_BACC2 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain G9842) GN=rocA PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.496e-23
Identity = 74/239 (30.96%), Postives = 123/239 (51.46%), Query Frame = 3 
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQLTIV-EISPTADIVKEELFAPVLYVMK 701
            ALV GN V+ K                 EV E   LP  +     G G+E+G  +   PR   VSFTGS  VG+ + +   +         + + E+ G +          +LA +S++ +A G +GQ+C+ C R +IHE +Y  VL++ V++ K++ + +P   GT +GP++    +  F+K +    I  + G+IL GG   +S+G F+Q TIV +++  A ++KEE+F PV+   K
Sbjct:  195 ALVSGNTVLLKPASTTPVVAAKFM----EVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFVSFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVN---DQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCK 426
[Close]
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ROCA_BACHK (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus thuringiensis subsp. konkukian GN=rocA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 73/239 (30.54%), Postives = 123/239 (51.46%), Query Frame = 3 
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQLTIV-EISPTADIVKEELFAPVLYVMK 701
            ALV GN V+ K                 EV E   LP  +     G G+E+G  +   PR   +SFTGS  VG+ + +   +         + + E+ G +          +LA +S++ +A G +GQ+C+ C R +IHE +Y  VL++ V++ K++ + +P   GT +GP++    +  F+K +    I  + G+IL GG   +S+G F+Q TIV +++  A ++KEE+F PV+   K
Sbjct:  195 ALVSGNTVLLKPASTTPVVAAKFM----EVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVN---DQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCK 426
[Close]
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ROCA_BACCZ (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=rocA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 73/239 (30.54%), Postives = 123/239 (51.46%), Query Frame = 3 
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQLTIV-EISPTADIVKEELFAPVLYVMK 701
            ALV GN V+ K                 EV E   LP  +     G G+E+G  +   PR   +SFTGS  VG+ + +   +         + + E+ G +          +LA +S++ +A G +GQ+C+ C R +IHE +Y  VL++ V++ K++ + +P   GT +GP++    +  F+K +    I  + G+IL GG   +S+G F+Q TIV +++  A ++KEE+F PV+   K
Sbjct:  195 ALVSGNTVLLKPASTTPVVAAKFM----EVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVN---DQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCK 426
[Close]
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ROCA_BACCQ (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain Q1) GN=rocA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 73/239 (30.54%), Postives = 123/239 (51.46%), Query Frame = 3 
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQLTIV-EISPTADIVKEELFAPVLYVMK 701
            ALV GN V+ K                 EV E   LP  +     G G+E+G  +   PR   +SFTGS  VG+ + +   +         + + E+ G +          +LA +S++ +A G +GQ+C+ C R +IHE +Y  VL++ V++ K++ + +P   GT +GP++    +  F+K +    I  + G+IL GG   +S+G F+Q TIV +++  A ++KEE+F PV+   K
Sbjct:  195 ALVSGNTVLLKPASTTPVVAAKFM----EVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVN---DQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCK 426
[Close]
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ROCA_BACC7 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain AH187) GN=rocA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 73/239 (30.54%), Postives = 123/239 (51.46%), Query Frame = 3 
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQLTIV-EISPTADIVKEELFAPVLYVMK 701
            ALV GN V+ K                 EV E   LP  +     G G+E+G  +   PR   +SFTGS  VG+ + +   +         + + E+ G +          +LA +S++ +A G +GQ+C+ C R +IHE +Y  VL++ V++ K++ + +P   GT +GP++    +  F+K +    I  + G+IL GG   +S+G F+Q TIV +++  A ++KEE+F PV+   K
Sbjct:  195 ALVSGNTVLLKPASTTPVVAAKFM----EVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVN---DQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCK 426
[Close]
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ROCA_BACC3 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain 03BB102) GN=rocA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 73/239 (30.54%), Postives = 123/239 (51.46%), Query Frame = 3 
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQLTIV-EISPTADIVKEELFAPVLYVMK 701
            ALV GN V+ K                 EV E   LP  +     G G+E+G  +   PR   +SFTGS  VG+ + +   +         + + E+ G +          +LA +S++ +A G +GQ+C+ C R +IHE +Y  VL++ V++ K++ + +P   GT +GP++    +  F+K +    I  + G+IL GG   +S+G F+Q TIV +++  A ++KEE+F PV+   K
Sbjct:  195 ALVSGNTVLLKPASTTPVVAAKFM----EVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVN---DQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCK 426
[Close]
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ROCA_BACC1 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain ATCC 10987) GN=rocA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 73/239 (30.54%), Postives = 123/239 (51.46%), Query Frame = 3 
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQLTIV-EISPTADIVKEELFAPVLYVMK 701
            ALV GN V+ K                 EV E   LP  +     G G+E+G  +   PR   +SFTGS  VG+ + +   +         + + E+ G +          +LA +S++ +A G +GQ+C+ C R +IHE +Y  VL++ V++ K++ + +P   GT +GP++    +  F+K +    I  + G+IL GG   +S+G F+Q TIV +++  A ++KEE+F PV+   K
Sbjct:  195 ALVSGNTVLLKPASTTPVVAAKFM----EVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVN---DQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCK 426
[Close]
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ROCA_BACC0 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain AH820) GN=rocA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.954e-23
Identity = 73/239 (30.54%), Postives = 123/239 (51.46%), Query Frame = 3 
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQLTIV-EISPTADIVKEELFAPVLYVMK 701
            ALV GN V+ K                 EV E   LP  +     G G+E+G  +   PR   +SFTGS  VG+ + +   +         + + E+ G +          +LA +S++ +A G +GQ+C+ C R +IHE +Y  VL++ V++ K++ + +P   GT +GP++    +  F+K +    I  + G+IL GG   +S+G F+Q TIV +++  A ++KEE+F PV+   K
Sbjct:  195 ALVSGNTVLLKPASTTPVVAAKFM----EVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVN---DQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCK 426
The following BLAST results are available for this feature:
BLAST of FC923767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ROCA_BACCR1.496e-2330.961-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC41.496e-2330.961-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC21.496e-2330.961-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACHK1.954e-2330.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACCZ1.954e-2330.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACCQ1.954e-2330.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC71.954e-2330.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC31.954e-2330.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC11.954e-2330.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC01.954e-2330.541-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionC31708G01EF StrClemenN Citrus clementina cDNA clone C31708G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923767 ID=FC923767; Name=FC923767; organism=Citrus clementina; type=EST; length=704bp
GGAATGCATGCATTGCACTAGTCTGCGGCAACTGTGTTGTTTGGAAAGGT
GCTCCAACAACTCCTTTGATCACCATAGCAATAACAAAGCTGGTGTCTGA
GGTTTTCGAGAGGAACAAGTTACCTGGTGCAATTTTTACCTCTTTTTGTG
GTGGGGCTGAGATAGGTCAAGCAATAGCGAAAGATCCACGTATTTCTCTG
GTTTCATTTACTGGGAGTACGAAGGTGGGTTTAATGGTGCAACAAACAGT
GCATCAGAGATTTGGTAAATGTTTACTTGAATTAAGTGGAAACAATGCTA
TTATTATTATGGATGATGCCGACATCAAACTAGCTGTTCGTTCTGTCCTA
TTTGCTGCTGTCGGTACAGCTGGTCAGCGCTGCACAACTTGTCGTAGACT
GCTTATTCACGAAAGCATATACCAGACAGTGCTTGATCAACTAGTTGATG
TGTACAAACAAGTTAAGATAGGAGATCCATTAGAAAAAGGTACCTTGCTC
GGGCCATTGCATACTCCTGAATCAAGGAAGAATTTCGAGAAAGGAATTGA
GAACATCAAATCTCAGGGAGGGAAGATCCTTATAGGTGGTTCTGTTATAG
AGTCTGAGGGGAACTTTGTGCAGCTCACAATAGTTGAGATTAGTCCAACA
GCTGACATTGTTAAAGAAGAGTTGTTTGCTCCTGTCCTTTATGTTATGAA
ATTT
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