FC923767

Overview
NameFC923767
Unique NameFC923767
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: YLX7_SCHPO (Putative aldehyde dehydrogenase-like protein C922.07c OS=Schizosaccharomyces pombe GN=SPAC922.07c PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 69/238 (28.99%), Postives = 108/238 (45.38%), Query Frame = 3
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD-----PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIE-SEGNFVQLTI-VEISPTADIVKEELFAPVLYVMKF 704
            AL  GNC++ K              LV E       P  +     G G   G  +AK P I  ++FTGSTKVG++VQQ          LE  G +            AV+      +  +GQ CT+  R+ + +S+Y    D+ ++++K+  I D     P +  T++GP+         +  IE  K +G K+++G   +   +G F+  TI  + S    IVKEE+F PV+ + KF
Sbjct:  178 ALAAGNCIIIKSAETTPLSLLYFATLVEEA----GFPKGVVNIISGLGTVAGSYMAKHPGIDKIAFTGSTKVGVIVQQLAASNLKAVTLECGGKSPFLVFEDADLDQAVKWAALGIMYNSGQICTSNSRIYVQDSVY----DKFIELFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYIEQGKKEGAKLVLGDEPLPLKQGYFISPTIFADCSENMTIVKEEIFGPVVAISKF 407          
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: GABD1_MYCPA (Succinate-semialdehyde dehydrogenase [NADP+] OS=Mycobacterium paratuberculosis GN=gabD1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 55/199 (27.64%), Postives = 93/199 (46.73%), Query Frame = 3
Query:   93 VSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQLTIV-EISPTADIVKEELFAPV 686
            +++V  R   P   F +    +   + I +DPR++  + TGS   G  V           +LEL G++            AV++ + A V   GQ C   +R ++H  IY   +D+ V+  K +K+GDP +  T +GPL T   R    K +++  + G  +  GG  ++  G F   T+V +I+    +  EE+F PV
Sbjct:  170 LADVITRGGFPEGCFQTLLVPSSAVERILRDPRVAAATLTGSEPAGQSVAAIAGDEIKPTVLELGGSDPFIVMPSADLDEAVKTAVTARVQNNGQSCIAAKRFIVHTDIYDAFVDKFVEQMKALKVGDPTDPATDVGPLATESGRDEIAKQVDDAVAAGATLRCGGKPLDGPGWFYPPTVVTDITKDMALYTEEVFGPV 368          
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ASTD_SHEHH (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella halifaxensis (strain HAW-EB4) GN=astD PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 67/233 (28.76%), Postives = 118/233 (50.64%), Query Frame = 3
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCL-LELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHE-SIYQTVLDQLVDVYKQVKIGD-PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQLTIVEISPTADIVKEELFAPVLYVMKF 704
            AL+ GN VV+K             +L+ +++E+  LP  +     G  E G+A+A  P+I  + FTGS++ G ++ Q      GK L LE+ GNN          K AV  ++ +A  +AGQRCT  RRL + + +    +L+QLV   KQ+K+G    +    +G + +  + K   +   N+ + G   L+  + IE+    V   +++++   ++  EE F P+L V+++
Sbjct:  158 ALLAGNTVVFK----PSELTPKVAELMLKLWEKAGLPAGVINLVQGEVETGKALAAHPQIDGLFFTGSSRTGHILHQQYAGDPGKILALEMGGNNPLIIKDVADTKAAVHDIIQSAYISAGQRCTCARRLYVEKGATGDALLEQLVAAIKQIKVGPWNAQPQPFMGSMISETAAKGMVEAQRNLLNLGANSLVELTHIEAGTGLVSPGLIDVTGVIELPDEEYFGPLLQVVRY 386          
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAS7 (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) GN=ALD5 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 62/232 (26.72%), Postives = 108/232 (46.55%), Query Frame = 3
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQLTI-VEISPTADIVKEELFAPVLYVMKF 704
            AL  GN VV K             +L  E      +P  +     G G  +G+ ++  P +  ++FTGST  G  + +       K  LEL G +            AV+++ F     +G+ C    R+ I +++Y+ VL +L D  + +K+GDP ++    G   + +        ++  KS+G +++ GG+   S+G FV+ T+  ++     IVKEE+F P++ V KF
Sbjct:  203 ALATGNTVVLKPAETTPLSALFASQLCQEA----GIPAGVVNILPGSGRVVGERLSAHPDVKKIAFTGSTATGRHIMKVAADTVKKVTLELGGKSPNIVFADADLDKAVKNIAFGIFYNSGEVCCAGSRIYIQDTVYEEVLQKLKDYTESLKVGDPFDEEVFQGAQTSDKQLHKILDYVDVAKSEGARLVTGGARHGSKGYFVKPTVFADVKEDMRIVKEEVFGPIVTVSKF 430          
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ALD1_STAHJ (Putative aldehyde dehydrogenase SH0913 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0913 PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 59/210 (28.10%), Postives = 106/210 (50.48%), Query Frame = 3
Query:   90 LVSEVFERNKLPGAIFTSFCGGAE-IGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIE---SEGNFVQLTI-VEISPTADIVKEELFAPVLYVMKF 704
            +++E+F++  +P  +F    G  E +G  +++ P++ ++SFTGS + G  + +   + F K  LEL G +          K A ++     V   GQ CT   R+LI ES  +  L  L + + +VK+GDP E+GT +GP+ + +     +  I+    +G ++  GG       + G F + TI + +     I +EE+F PV  V+ +
Sbjct:  181 ILAEIFDKVGVPKGVFNLVNGDGEGVGNPLSEHPKVRMMSFTGSGRTGSKIMEKASKDFKKVSLELGGKSPYIVLDDVDVKEAAKATTGKVVNNTGQVCTAGTRILIPESKKEDFLTALKEEFSKVKVGDPREEGTQVGPIISKKQFDTVQSYIDKGIEEGAELFYGGPGKPEGLNTGYFARPTIFINVDNDMTIAQEEIFGPVASVITY 390          
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ASTD_NOVAD (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=astD PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 63/231 (27.27%), Postives = 112/231 (48.48%), Query Frame = 3
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCL-LELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL-EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQLTIVEISPTADIVKEELFAPVLYVMK 701
            AL+ GN VV+K             +++++ F R  +P A+     GG E GQA+     I  V FTGS   G+ + + +    GK + LE+ GNN          + A   ++ +A  +AGQRCT  RRL+I  S++  V+D +  +  ++ +G P  +    +GP+    +     +    + S GG+ +     ++ +  F+   I++++  AD    ELF P+L V++
Sbjct:  145 ALIAGNAVVFK----PSEKTPATGEMLAQCFHRAGIPAAVVQVLIGGPEEGQALVAHDGIDGVLFTGSAHAGIAINRKLASNPGKIVALEMGGNNPIVVWDTPKIEDAATLIVQSAFTSAGQRCTAARRLIIKASMFDEVIDHVKRLADRIIVGAPFDDPAPFMGPVIDNRTADGLTESFVYLLSSGGRPIKHMVRLQEDRPFLSPAIIDVTAVADRPDVELFGPLLQVVR 371          
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAST (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae GN=ALD5 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 62/232 (26.72%), Postives = 108/232 (46.55%), Query Frame = 3
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQLTI-VEISPTADIVKEELFAPVLYVMKF 704
            AL  GN VV K             +L  E      +P  +     G G  +G+ ++  P +  ++FTGST  G  + +       K  LEL G +            AV+++ F     +G+ C    R+ I +++Y+ VL +L D  + +K+GDP ++    G   + +        ++  KS+G +++ GG+   S+G FV+ T+  ++     IVKEE+F P++ V KF
Sbjct:  203 ALATGNTVVLKPAETTPLSALFASQLCQEA----GIPAGVVNILPGSGRVVGERLSAHPDVKKIAFTGSTATGRHIMKVAADTVKKVTLELGGKSPNIVFADADLDKAVKNIAFGIFYNSGEVCCAGSRIYIQDTVYEEVLQKLKDYTESLKVGDPFDEEVFQGAQTSDKQLHKILDYVDVAKSEGARLVTGGARHGSKGYFVKPTVFADVKGDMRIVKEEVFGPIVTVSKF 430          
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: YNEI_ECOLI (Aldehyde dehydrogenase-like protein yneI OS=Escherichia coli (strain K12) GN=yneI PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19
Identity = 53/201 (26.37%), Postives = 97/201 (48.26%), Query Frame = 3
Query:   87 KLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQLTIV-EISPTADIVKEELFAPV 686
            +L+++VF+   +P  ++       +    + KD RI+ V+ TGS + G  +         KC+LEL G++          +LAV++ +       GQ C   +R +I E I     ++ V     +K+GDP ++   LGP+   + R      +E   +QG ++L+GG  +   GN+   T++  ++P     +EE+F PV
Sbjct:  170 QLIAQVFKDAGIPQGVYGWLNADNDGVSQMIKDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEKTLAQGARLLLGGEKMAGAGNYYPPTVLANVTPEMTAFREEMFGPV 370          
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: AL9A1_BOVIN (4-trimethylaminobutyraldehyde dehydrogenase OS=Bos taurus GN=ALDH9A1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19
Identity = 66/237 (27.85%), Postives = 107/237 (45.15%), Query Frame = 3
Query:   15 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESE------GNFVQ-LTIVEISPTADIVKEELFAPVLYVMKF 704
            AL CGN +V+K              L++E++    +P  +F    GGA  GQ + +   ++ VSFTGS   G  + +   +      LEL G +          K AV+  L A   T G+ C    R+ + + I     +++V   +++KIGDPL + T +GPL      +     ++  K QG K+L GG V   E      G +++   +         VKEE+F PV+ ++ F
Sbjct:  170 ALACGNAMVFKPSPFTPVSVL----LLAEIYTEAGVPPGLFNVVQGGAATGQFLCQHRDVAKVSFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFSDCDMKNAVKGALMANFLTQGEVCCNGTRVFVQKEILDQFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERVLGFVKVAKEQGAKVLCGGDVFVPEDPKLKDGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSF 402          
BLAST of FC923767 vs. ExPASy Swiss-Prot
Match: IOLA_LISMH (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=iolA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.712e-19
Identity = 69/207 (33.33%), Postives = 101/207 (48.79%), Query Frame = 3
Query:   87 KLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIE-SEGNFVQLTIVE-ISPTADIVKEELFAPVLYVMK 701
            KLV E+F    LP  +F    G  ++   I ++  I  VSF GS  VG  V +T      +        N          +  V +V+ AA G+AG+RC  C  + + E I    L+ L    K VKIG+ L+ G  LGP+   E++K     IE    +G K+ + G     SEG+FV  TI+E ++    I K+E+FAPVL V++
Sbjct:  187 KLV-ELFSEAGLPKGVFNVVYGAHDVVNGILENEIIKAVSFVGSKPVGEYVYKTGSANLKRVQALTGAKNHTIVLNDADLEDTVTNVISAAFGSAGERCMACAVVTVEEDIADEFLEALRTAAKNVKIGNGLDDGVFLGPVIREENQKRTIAYIEKGVEEGAKLTVDGRETGLSEGHFVGPTILEDVTTDMTIWKDEIFAPVLSVIR 392          
The following BLAST results are available for this feature:
BLAST of FC923767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
YLX7_SCHPO4.506e-2028.99Putative aldehyde dehydrogenase-like protein C922.... [more]
GABD1_MYCPA7.685e-2027.64Succinate-semialdehyde dehydrogenase [NADP+] OS=My... [more]
ASTD_SHEHH7.685e-2028.76N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ALDH5_YEAS77.685e-2026.72Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
ALD1_STAHJ7.685e-2028.10Putative aldehyde dehydrogenase SH0913 OS=Staphylo... [more]
ASTD_NOVAD1.004e-1927.27N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ALDH5_YEAST1.004e-1926.72Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
YNEI_ECOLI1.311e-1926.37Aldehyde dehydrogenase-like protein yneI OS=Escher... [more]
AL9A1_BOVIN1.311e-1927.854-trimethylaminobutyraldehyde dehydrogenase OS=Bos... [more]
IOLA_LISMH1.712e-1933.33Methylmalonate semialdehyde dehydrogenase [acylati... [more]

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Properties
Property NameValue
Genbank descriptionC31708G01EF StrClemenN Citrus clementina cDNA clone C31708G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923767 ID=FC923767; Name=FC923767; organism=Citrus clementina; type=EST; length=704bp
GGAATGCATGCATTGCACTAGTCTGCGGCAACTGTGTTGTTTGGAAAGGT
GCTCCAACAACTCCTTTGATCACCATAGCAATAACAAAGCTGGTGTCTGA
GGTTTTCGAGAGGAACAAGTTACCTGGTGCAATTTTTACCTCTTTTTGTG
GTGGGGCTGAGATAGGTCAAGCAATAGCGAAAGATCCACGTATTTCTCTG
GTTTCATTTACTGGGAGTACGAAGGTGGGTTTAATGGTGCAACAAACAGT
GCATCAGAGATTTGGTAAATGTTTACTTGAATTAAGTGGAAACAATGCTA
TTATTATTATGGATGATGCCGACATCAAACTAGCTGTTCGTTCTGTCCTA
TTTGCTGCTGTCGGTACAGCTGGTCAGCGCTGCACAACTTGTCGTAGACT
GCTTATTCACGAAAGCATATACCAGACAGTGCTTGATCAACTAGTTGATG
TGTACAAACAAGTTAAGATAGGAGATCCATTAGAAAAAGGTACCTTGCTC
GGGCCATTGCATACTCCTGAATCAAGGAAGAATTTCGAGAAAGGAATTGA
GAACATCAAATCTCAGGGAGGGAAGATCCTTATAGGTGGTTCTGTTATAG
AGTCTGAGGGGAACTTTGTGCAGCTCACAATAGTTGAGATTAGTCCAACA
GCTGACATTGTTAAAGAAGAGTTGTTTGCTCCTGTCCTTTATGTTATGAA
ATTT
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