FC923768

Overview
NameFC923768
Unique NameFC923768
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDC2_CAEEL (Cell division control protein 2 homolog OS=Caenorhabditis elegans GN=cdk-1 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.538e-50
Identity = 96/198 (48.48%), Postives = 127/198 (64.14%), Query Frame = 2
Query:   41 VKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLPK 634
            +K    Q+L+ + + H   V+HRDLK  NLL++N G +K+ DFGLAR  G P++ YTH VV LWYRAPE+L+G+++YS  +DMWS+GCI AE+ +K+PLF G SE D+L +IF+ LGTP E  W G   LP  K  F K + N LR KF     TG  +L D  F LL  LL YDP  R+ A+ AL H +F  +   K
Sbjct:  123 LKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDNNGAIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRVLGTPTELEWNGVESLPDYKATFPKWRENFLRDKF-YDKKTGKHLLDDTAFSLLEGLLIYDPSLRLNAKKALVHPYFDNMDTSK 319          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDC22_MEDSA (Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.115e-49
Identity = 98/199 (49.25%), Postives = 132/199 (66.33%), Query Frame = 2
Query:   32 QSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGE-LKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSF-TGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREV 622
            Q ++K  + Q+L GI Y H + VLHRDLK  NLL++     +K+ DFGLAR +G P++ +TH VV LWYRAPE+LLGS+ YST +D+WS+GCI AE++++ PLF G SE D+L KIF+  GTPNE+ WPG + LP  K  F          K+PA    T  P L  AG DLL+S    DP +RITA  AL H++F+++
Sbjct:  101 QRQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSSNAVKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMINQRPLFPGDSEIDELFKIFRITGTPNEETWPGVTSLPDFKSAF---------PKWPAKDLATQVPNLEPAGLDLLSSTCRLDPTRRITARGALEHEYFKDI 290          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDKF2_ORYSJ (Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica GN=CDKF-2 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.456e-49
Identity = 99/208 (47.60%), Postives = 135/208 (64.90%), Query Frame = 2
Query:    8 ETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLP 631
            E   +PF ++E + LM QLL+G+  +H   V+HRDLK  N+++  RG+LKICDFG++R   +   PYT  VV LWYRAPEL+LGS++Y + +D WSLGCIMAELL+  PLF G+SE DQL+++F T+G  + K WPGF++LP  +           R + P+      P LS AGFD+L+ LL   PD+R+TA  AL   WF E   P
Sbjct:  100 ERRGRPFPEAEARRLMRQLLDGVAAMHAAGVMHRDLKPDNVVVGPRGDLKICDFGMSRVTAAGAPPYTSPVVTLWYRAPELILGSQEYDSLVDTWSLGCIMAELLAGAPLFPGRSEMDQLNRVFDTVGMQDMKSWPGFARLPRAESALCS------RARPPSRLREMFPKLSAAGFDVLSGLLACRPDRRLTAADALRCAWFTEADTP 301          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDC2_CARAU (Cell division control protein 2 homolog OS=Carassius auratus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.902e-49
Identity = 97/194 (50.00%), Postives = 128/194 (65.98%), Query Frame = 2
Query:   41 VKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREV 622
            VK  + Q+LEGI + H   VLHRDLK  NLL++N+G +K+ DFGLAR +G P++ YTH VV LWYRAPE+LLG+ +YST +D+WS+G I AEL +K+PLF+G SE DQL +IF+TLGTPN ++WP    LP  K  F K +   L              L   G DLL  +L YDP KRI+A  A+ H +F ++
Sbjct:  105 VKSYLYQILEGILFCHCRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGASRYSTPVDVWSIGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNEVWPDVESLPDYKNTFPKWKSGNLASTVKN--------LDKNGIDLLTKMLIYDPPKRISARQAMTHPYFDDL 290          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.902e-49
Identity = 97/212 (45.75%), Postives = 140/212 (66.04%), Query Frame = 2
Query:    5 METM-KQPFSQSE-VKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLPK 634
            M+T+ K+ +  SE +K    Q+L+ + + H   V+HRDLK  NLL++ +G +K+ DFGLAR  G P++ YTH VV LWYRAPE+L+G+++YS  +DMWS+GCI AE+ +K+PLF G SE D+L +IF+ LGTP E  W G   LP  K  F K + N LR KF     +G+ ++ +  F LL  LL YDP  RI+++ AL+H +F ++   K
Sbjct:  103 MDTLSKEEYLPSETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDEKGAIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRILGTPTELEWNGVESLPDYKATFPKWRENFLRDKF-YDKKSGNYLMDEDAFSLLEGLLIYDPALRISSKKALHHPYFNDIDTSK 313          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDC2_PONAB (Cell division control protein 2 homolog OS=Pongo abelii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.484e-49
Identity = 96/201 (47.76%), Postives = 133/201 (66.17%), Query Frame = 2
Query:   20 QPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREV 622
            Q    S VK  + Q+L+GI + H   VLHRDLK  NLL++++G +K+ DFGLAR +G P++ YTH VV LWYR+PE+LLGS +YST +D+WS+G I AEL +K+PLF+G SE DQL +IF+ LGTPN ++WP    L   K  F K +        P +  +    L + G DLL+ +L YDP KRI+ + ALNH +F ++
Sbjct:   98 QYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWK--------PGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDL 290          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 2.484e-49
Identity = 96/201 (47.76%), Postives = 133/201 (66.17%), Query Frame = 2
Query:   20 QPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREV 622
            Q    S VK  + Q+L+GI + H   VLHRDLK  NLL++++G +K+ DFGLAR +G P++ YTH VV LWYR+PE+LLGS +YST +D+WS+G I AEL +K+PLF+G SE DQL +IF+ LGTPN ++WP    L   K  F K +        P +  +    L + G DLL+ +L YDP KRI+ + ALNH +F ++
Sbjct:   98 QFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKSTFPKWK--------PGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDL 290          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDC2H_THEAN (Cell division control protein 2 homolog OS=Theileria annulata GN=CRK2 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.484e-49
Identity = 97/210 (46.19%), Postives = 137/210 (65.24%), Query Frame = 2
Query:    2 LMETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLP 631
            L++        +  K  + Q+L GI Y HD+ +LHRDLK  NLL+N  G LK+ DFGLAR +  P++ YTH VV LWYRAP++L+GSK+YSTA+D+WS+GCI AE+++  PLF G SE DQL +IFK LGTPN   WP    LP    +F  ++      K   +S    P L+++G DL++ +L  DP +RI+A+ AL HD+F+++  P
Sbjct:   89 LLDACDGGLEPTTAKSFLYQILRGISYCHDHRILHRDLKPQNLLINREGVLKLADFGLARAFAIPVRSYTHEVVTLWYRAPDVLMGSKKYSTAVDIWSVGCIFAEMINGVPLFPGISEQDQLKRIFKILGTPNVDSWPQVVNLPAYNPDFCYYE------KQAWSSIV--PKLNESGIDLISRMLQLDPVQRISAKEALKHDYFKDLHRP 290          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDC2_CHICK (Cell division control protein 2 homolog OS=Gallus gallus GN=CDC2 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.245e-49
Identity = 97/201 (48.26%), Postives = 132/201 (65.67%), Query Frame = 2
Query:   20 QPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREV 622
            Q   +S VK  + Q+L+GI + H   VLHRDLK  NLL++++G +K+ DFGLAR +G P++ YTH VV LWYR+PE+LLGS  YST +D+WS+G I AEL +K+PLF+G SE DQL +IF+ LGTPN  +WP    L   K  F K +        P +  T    L + G DLL+ +L YDP KRI+ + ALNH +F ++
Sbjct:   98 QYLDRSRVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRSPEVLLGSALYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNDVWPDVESLQDYKNTFPKWK--------PGSLGTHVQNLDEDGLDLLSKMLIYDPAKRISGKMALNHPYFDDL 290          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDKE1_ORYSJ (Cyclin-dependent kinase E-1 OS=Oryza sativa subsp. japonica GN=CDKE-1 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.238e-49
Identity = 107/232 (46.12%), Postives = 141/232 (60.78%), Query Frame = 2
Query:    8 ETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGE----LKICDFGLARQYGSPLKPYTH--LVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKS--------EFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSFTGSPVL--SDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLPKSKDFMPT 655
            E +  P +   VK L+ QLL G+ YLH NW++HRDLK SN+L+   GE    +KI DFGLAR Y +PLKP +   +VV +WYRAPELLLG+K Y++A+DMW++GCI AELL+ +PLF G          + DQLDKIFK LG P  + WP  + LP     +   Q ++   K+  T       L      FDLL+ +L YDP KRITA  AL H++FR  PLP     +P+
Sbjct:  124 EKLNLPINPYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGIIKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEAKATPNPFQLDQLDKIFKVLGHPTVEKWPTLANLP----CWQNDQQHIQGHKYENTGLHNIVHLPQKSPAFDLLSKMLEYDPRKRITAAQALEHEYFRMDPLPGRNALLPS 351          
The following BLAST results are available for this feature:
BLAST of FC923768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_CAEEL6.538e-5048.48Cell division control protein 2 homolog OS=Caenorh... [more]
CDC22_MEDSA1.115e-4949.25Cell division control protein 2 homolog 2 OS=Medic... [more]
CDKF2_ORYSJ1.456e-4947.60Putative cyclin-dependent kinase F-2 OS=Oryza sati... [more]
CDC2_CARAU1.902e-4950.00Cell division control protein 2 homolog OS=Carassi... [more]
CDC2_CAEBR1.902e-4945.75Cell division control protein 2 homolog OS=Caenorh... [more]
CDC2_PONAB2.484e-4947.76Cell division control protein 2 homolog OS=Pongo a... [more]
CDC2_BOVIN2.484e-4947.76Cell division control protein 2 homolog OS=Bos tau... [more]
CDC2H_THEAN2.484e-4946.19Cell division control protein 2 homolog OS=Theiler... [more]
CDC2_CHICK3.245e-4948.26Cell division control protein 2 homolog OS=Gallus ... [more]
CDKE1_ORYSJ4.238e-4946.12Cyclin-dependent kinase E-1 OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionC31708G02EF StrClemenN Citrus clementina cDNA clone C31708G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923768 ID=FC923768; Name=FC923768; organism=Citrus clementina; type=EST; length=674bp
ACTGATGGAGACAATGAAGCAACCATTTAGTCAGAGTGAAGTAAAATGCT
TGATGCTCCAGCTATTGGAGGGTATTAAGTATCTTCATGATAATTGGGTG
CTTCATAGGGATTTGAAAACTTCCAACCTGCTTTTAAATAACCGAGGTGA
GTTGAAGATCTGTGATTTTGGGCTGGCTCGTCAATATGGGAGCCCACTGA
AACCTTATACTCATTTGGTAGTTATCCTTTGGTACAGGGCACCTGAACTT
CTATTGGGATCAAAACAGTATTCAACGGCAATTGACATGTGGTCTTTGGG
TTGTATCATGGCTGAGCTATTATCAAAGGAGCCACTGTTCAATGGGAAAA
GTGAATTTGATCAACTTGACAAGATCTTTAAAACTCTTGGTACTCCTAAT
GAGAAAATTTGGCCTGGGTTTTCTAAGCTGCCTGGAGTTAAGGTCAACTT
TATCAAGCATCAGTATAATCTATTGCGCAAGAAATTCCCAGCAACATCTT
TCACTGGATCACCAGTTTTATCTGATGCTGGCTTTGATTTATTAAACTCA
CTGTTAACATATGATCCTGACAAGCGGATAACAGCTGAAGCTGCACTTAA
TCATGATTGGTTCCGTGAAGTTCCACTTCCGAAGTCCAAAGATTTTATGC
CTACTTTTCCTGCTNCACATGCTC
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