FC923821

Overview
NameFC923821
Unique NameFC923821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923821 vs. ExPASy Swiss-Prot
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.363e-26
Identity = 59/168 (35.12%), Postives = 93/168 (55.36%), Query Frame = 2
Query:  260 PILCINNCGFFGSVATMNMCSKCCKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAK--------------PKEGPSRCSSCKKRVGLTGFKCRXWYLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPCDQAEK 721
            P LC NNCGFFGS AT N+CSKC +D+  ++  +  A  ++            ++S+AA      +S      +S  P   ++  E VEAK              P + P RC +C++RVG+TGF+CR  +++C +HRY+++H C FD++   +D I K+NP  +A+K
Sbjct:   10 PRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHAL------------TQSLAAVGAAASSS------VSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCGTHRYAEQHECSFDFKRMGKDKIAKANPIVKADK 159          
BLAST of FC923821 vs. ExPASy Swiss-Prot
Match: SAP7_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Oryza sativa subsp. japonica GN=SAP7 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.269e-25
Identity = 60/165 (36.36%), Postives = 89/165 (53.94%), Query Frame = 2
Query:  227 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCCKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRXWYLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPCDQAEK 721
            DET C +   G  +C+  CGFFGS AT NMCS+C ++     D  + AA++   +          E V  A    + + +   +     S +S  +E   AK    P+RC++C+K+VGLTGFKCR    +C  HR++D H C FDY++A ++ I K NP   A+K
Sbjct:   11 DETACGSGA-GAAMCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAANSDL----------ELVGVAETTTKKARMSAVVPVAVASSSSAAAEQPAAKAATAPNRCAACRKKVGLTGFKCRCGGNFCGGHRHADAHGCGFDYKSAGKEQIAKQNPLVVADK 164          
BLAST of FC923821 vs. ExPASy Swiss-Prot
Match: SAP11_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica GN=SAP11 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.300e-25
Identity = 61/152 (40.13%), Postives = 83/152 (54.61%), Query Frame = 2
Query:  266 LCINNCGFFGSVATMNMCSKCCKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRXWYLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPCDQAEK 721
            LC N+CGF G+ AT N+C  C          +  AAS        T+S      V      VQ+S+     + V+   A  +  S +A      +RC SC++RVGLTGF+CR   LYC +HRYSD+H+C FDY++AARDAI + NP  +A K
Sbjct:   21 LCANSCGFPGNPATNNLCQNCFLAASASSSSSSAAASP------STTSLPVFPVVEKPRQAVQSSAAAAVALVVERPTAGPVESSSKASRSSSVNRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRAAK 166          
BLAST of FC923821 vs. ExPASy Swiss-Prot
Match: SAP5_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Oryza sativa subsp. japonica GN=SAP5 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.403e-24
Identity = 61/152 (40.13%), Postives = 85/152 (55.92%), Query Frame = 2
Query:  266 LCINNCGFFGSVATMNMCSKCCKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRXWYLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPCDQAEK 721
            LC NNCGFFGS AT+++CSKC +D   ++  A +  ++  S    T  S+ S S   A +                S A+E    V A  K   SRC+SC+KRVGLTGF CR    +C +HRY ++H C FD++ A RDAI ++NP  + +K
Sbjct:   14 LCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACPATHPSSPSSSSCPAFLP--------------SSTAAEAGVVVAAVAKA--SRCASCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDK 149          
BLAST of FC923821 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica GN=SAP1 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.647e-23
Identity = 63/178 (35.39%), Postives = 93/178 (52.25%), Query Frame = 2
Query:  212 ENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCCKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQ---PSCASELSESVEAKPK-----EGPSRCSSCKKRVGLTGFKCRXWYLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPCDQAEK 721
            +  D + T  +AP     LC N+CGF G+ AT N+C  C            LAA         T+S++   S+++  +D Q       ++  Q   P    E++ ++   P         +RCS C+KRVGLTGF+CR  +L+C  HRYSD+H C +DY++AARDAI + NP  +A K
Sbjct:    5 DKKDQEPTELRAPEI--TLCANSCGFPGNPATQNLCQNCF-----------LAA---------TASTSSPSSLSSPVLDKQPPRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAK 160          
BLAST of FC923821 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.647e-23
Identity = 63/178 (35.39%), Postives = 93/178 (52.25%), Query Frame = 2
Query:  212 ENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCCKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQ---PSCASELSESVEAKPK-----EGPSRCSSCKKRVGLTGFKCRXWYLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPCDQAEK 721
            +  D + T  +AP     LC N+CGF G+ AT N+C  C            LAA         T+S++   S+++  +D Q       ++  Q   P    E++ ++   P         +RCS C+KRVGLTGF+CR  +L+C  HRYSD+H C +DY++AARDAI + NP  +A K
Sbjct:    5 DKKDQEPTELRAPEI--TLCANSCGFPGNPATQNLCQNCF-----------LAA---------TASTSSPSSLSSPVLDKQPPRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAK 160          
BLAST of FC923821 vs. ExPASy Swiss-Prot
Match: SAP3_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.515e-23
Identity = 58/161 (36.02%), Postives = 91/161 (56.52%), Query Frame = 2
Query:  242 QAPPEGPILCINNCGFFGSVATMNMCSKCCKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPS-RCSSCKKRVGLTGFKCRXWYLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPCDQAEK 721
            QA    P+LC + CGF+G+ AT++MCS C +   L    A +A     S+   ++++  + +V + +  V ++ V     S + +      E      K+ P+ RC+SCKK+VGL GF CR    YC +HRY +KH C FD++ A+RDAI ++NP  + EK
Sbjct:  196 QASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCLLNG-ATMATGPSSSVAAASAATVATGAVTSDSCSVPSAEVNGAAFSSKNN-----PEPATVVEKKAPANRCASCKKKVGLLGFACRCGATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEK 350          
BLAST of FC923821 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.716e-22
Identity = 68/195 (34.87%), Postives = 97/195 (49.74%), Query Frame = 2
Query:  260 PILCINNCGFFGSVATMNMCSKCCKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQP----SCAS-------------------------------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRXWYLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPCDQAEK 721
            P+LC   CGF+G+  T  MCS C K+ + +Q+ +    S   + V+  S S      +GS   A +T+D  +SS++P  +S Q     S AS                               E S+S+E KPK+  +RC  C+K+VGLTGF+CR   +YC  HRYSD HNC ++Y+  A + I K NP    EK
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSTLDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDLQASVSDTAQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEK 204          
BLAST of FC923821 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.716e-22
Identity = 69/202 (34.16%), Postives = 88/202 (43.56%), Query Frame = 2
Query:  257 GPILCINNCGFFGSVATMNMCSKCCKDIMLKQ--------------------DQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSV-----------------------EPKIISVQPSCASELSESVEAK----PKEGPSRCSSCKKRVGLTGFKCRXWYLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPCDQAEK 721
            GP+LC   CGF+G+  T  MCS C K+ + +Q                    D A +  +  G  +N    + GS S  +  V V A  V                       EP +    PS +   S   E K    PK   +RC  C+K+VGLTGF CR   L+C  HRYSDKHNCP+DY+  A   I K NP   AEK
Sbjct:   10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADAG--LNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEK 209          
BLAST of FC923821 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22
Identity = 66/195 (33.85%), Postives = 92/195 (47.18%), Query Frame = 2
Query:  260 PILCINNCGFFGSVATMNMCSKCCKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQP-----------------------------------SCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRXWYLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPCDQAEK 721
            P+LC   CGF+G+  T  MCS C K+ + +Q+ +    S     V   S S      +GS   A + +D  ASSV+P  +S Q                                      + E S+S+E KPK+  +RC  C+K+VGLTGF+CR   +YC  HRYSD HNC ++Y+  A + I K NP    EK
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAPSVTSLSESLPVQCTDGSVPEAQSALDSTASSVQPSPVSNQSLLSESVASSQVDSTSVDKAIPETEDLQASVSETAQQASEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEK 204          
The following BLAST results are available for this feature:
BLAST of FC923821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
SAP3_ARATH4.363e-2635.12Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ORYSJ1.269e-2536.36Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP11_ORYSJ6.300e-2540.13Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP5_ORYSJ1.403e-2440.13Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSJ2.647e-2335.39Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSI2.647e-2335.39Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP3_ORYSJ4.515e-2336.02Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_PONAB1.716e-2234.87AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN5_MOUSE1.716e-2234.16AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
ZFAN6_BOVIN2.241e-2233.85AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]

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Properties
Property NameValue
Genbank descriptionC31709C07EF StrClemenN Citrus clementina cDNA clone C31709C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923821 ID=FC923821; Name=FC923821; organism=Citrus clementina; type=EST; length=722bp
GGGGAAGCCTTTTTAAAAAAAATCAAAGAGAGAGAGAGAGAGAGACACCC
GGAAAGGGAAACGAGGACGTCTCTCATCGGTTTTTGCCTGCTCTCTCCCC
GATAGGCCGATCTGGTCCATTTAATTTTAGGGGCTCATTGGATGCTGGCT
TGAGCTCGGGGATCGGCTTAAGGGATTCATTGCTGTTTCTTCTGTTGCTC
GCAGGGGTGGTGAAAACATGGACCATGATGAGACTGGATGCCAAGCTCCT
CCTGAGGGCCCTATCTTGTGCATCAACAATTGTGGTTTCTTTGGAAGTGT
GGCTACTATGAATATGTGTTCCAAATGCTGCAAGGATATAATGCTGAAAC
AGGATCAAGCTAAGCTTGCTGCTTCATCTATTGGAAGCATTGTGAATGAA
ACGTCAAGCAGCAATGGAAGTGAATCTGTTGCTGCTGCCACTGTTGATGT
GCAAGCTAGTTCAGTGGAGCCAAAAATCATCTCTGTGCAGCCATCATGTG
CTTCAGAATTGAGCGAGAGTGTGGAGGCAAAGCCGAAGGAGGGTCCCAGC
CGGTGCAGCAGTTGCAAGAAGCGTGTTGGTTTAACAGGATTCAAATGTCG
CTGNTGGTACTTATACTGTGTGTCACATCGCTATTCGGACAAACATAACT
GCCCCTTTGACTACCGCACTGCTGCTAGGGATGCTATAATTAAAAGCAAC
CCNTGTGATCAGGCTGAGAAGC
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