FC923825

Overview
NameFC923825
Unique NameFC923825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_ASPNG (Anthranilate synthase component 2 OS=Aspergillus niger GN=trpC PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23
Identity = 57/125 (45.60%), Postives = 83/125 (66.40%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQ-DSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGE-DGLLAGLSI 696
            +I+IDNYDSFT+N+ QY+   G    V+RND++T+EEL  K P  ++ISPGP  P+ D+GIS   +      +P+FGVCMG QCI   FGGK+  +   ++HGK+S + +D KG  +GL   L++
Sbjct:   26 VILIDNYDSFTWNVYQYLVLEGATVNVFRNDQITLEELIAKKPTQLVISPGPGHPETDAGISSAAIQYFSGKIPIFGVCMGQQCIITCFGGKVDVTG-EILHGKTSPLKHDGKGAYEGLPGSLAV 149          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: PABA_KLEAE (Para-aminobenzoate synthase glutamine amidotransferase component II OS=Klebsiella aerogenes GN=pabA PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23
Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 666
            I++IDNYDSFT+NL QY  ELG    V RNDELT+ ++    P  ++ISPGP TP +SGISL  +       P+ GVC+G Q I + FG  IVR+   VMHGK+S V +  +G
Sbjct:    2 ILLIDNYDSFTWNLYQYFCELGAEVLVRRNDELTLADIISLAPAKIVISPGPCTPDESGISLAAIRHFSGQTPILGVCLGHQAIAQVFGAAIVRA-AKVMHGKTSPVSHTGQG 113          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_SULSO (Anthranilate synthase component II OS=Sulfolobus solfataricus GN=trpG PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.774e-22
Identity = 53/107 (49.53%), Postives = 72/107 (67.29%), Query Frame = 1
Query:  331 IVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTP---QDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSS 642
            ++IDNYDSF YN+ Q +GELG +  V RNDE++++ ++R +P  ++ISPGP TP   +D G+SL  +  LG   P+ GVC+G Q IG AFG KI R    V HGK S
Sbjct:    5 LIIDNYDSFVYNIAQIVGELGSYPIVIRNDEISIKGIERIDPDRIIISPGPGTPEKREDIGVSLDVIKYLGKRTPILGVCLGHQAIGYAFGAKI-RRARKVFHGKIS 110          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_EMENI (Anthranilate synthase component 2 OS=Emericella nidulans GN=trpC PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22
Identity = 52/114 (45.61%), Postives = 78/114 (68.42%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQ-DSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 666
            +I+IDNYDSFT+N+ QY+   G    V RNDE+++EEL  K P  +++SPGP  P+ D+GIS   +      +P+FGVCMG QCI  +FGGK+  +   ++HGK+S++ +D +G
Sbjct:   26 VILIDNYDSFTWNVYQYLVLEGATVTVIRNDEISLEELIAKKPTQLVVSPGPGHPKSDAGISNAAIQYFAGKIPIFGVCMGQQCIHHSFGGKVDVTG-EILHGKTSVLKHDGRG 138          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_YEAST (Anthranilate synthase component 2 OS=Saccharomyces cerevisiae GN=TRP3 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21
Identity = 50/114 (43.86%), Postives = 76/114 (66.67%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQ-DSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 666
            +++IDNYDSFT+N+ +Y+ + G    VYRND +TV E+   NP  +LISPGP  P+ DSGIS   +      +P+FG+CMG QC+ + FGG++  +   ++HGK+S + +D  G
Sbjct:   14 VVLIDNYDSFTWNVYEYLCQEGAKVSVYRNDAITVPEIAALNPDTLLISPGPGHPKTDSGISRDCIRYFTGKIPVFGICMGQQCMFDVFGGEVAYAG-EIVHGKTSPISHDNCG 126          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_LEPBI (Anthranilate synthase component II OS=Leptospira biflexa GN=trpG PE=4 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21
Identity = 55/134 (41.04%), Postives = 82/134 (61.19%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGEL------GYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQDS---GISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGE-DGLLAGLSIL 699
            ++++DNYDSFT+NL Q +GE+       +  +V RNDE   E +K  N   ++ISPGP  P D    G+S   + ELG T P+ G+C+G+Q +   FGG++VR+ +  MHGK S + +D KG   GL  G+ I+
Sbjct:    3 VLILDNYDSFTFNLYQIVGEILEEREKPFQLDVIRNDEKPFEWIKSANYDKIIISPGPGHPADPAYFGVSADILKELGKTPPVLGICLGMQGMATVFGGEVVRANI-AMHGKLSPIEHDGKGVFSGLTQGIEIM 135          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_ASPAW (Anthranilate synthase component 2 OS=Aspergillus awamori GN=trpC PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21
Identity = 57/130 (43.85%), Postives = 84/130 (64.62%), Query Frame = 1
Query:  313 NNKNPIIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQ-DSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGE-DGLLAGLSI 696
            N  + +I+IDNYDSFT+N+  Y+   G    V+RND++T+EEL  K P  ++ISPGP  P+ D+GIS   +      +P+FGVCMG QCI   FGGK+  +   ++HGK+S + +D KG  +GL   L++
Sbjct:   21 NTASNVILIDNYDSFTWNV--YLVLEGATVNVFRNDQITLEELIAKKPTQLVISPGPGHPETDAGISSAAIQYFSGKIPIFGVCMGQQCIITCFGGKVDVTG-EILHGKTSALKHDGKGAYEGLPDSLAL 147          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_MYCTU (Anthranilate synthase component 2 OS=Mycobacterium tuberculosis GN=trpG PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.006e-20
Identity = 54/116 (46.55%), Postives = 74/116 (63.79%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDE--LTVEELKRKNPRGVLISPGPDTPQDSGISLQTVLELGPT-VPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 666
            I+V+DNYDSF +NL QY+G+LG   EV+RND+  L+ E        GVL+SPGP TP+ +G S+  V        PL GVC+G Q IG AFG  + R+P  ++HGK+S V++   G
Sbjct:    3 ILVVDNYDSFVFNLVQYLGQLGIEAEVWRNDDHRLSDEAAVAGQFDGVLLSPGPGTPERAGASVSIVHACAAAHTPLLGVCLGHQAIGVAFGATVDRAP-ELLHGKTSSVFHTNVG 117          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_PHACH (Anthranilate synthase component 2 OS=Phanerochaete chrysosporium GN=TRPC PE=4 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 48/114 (42.11%), Postives = 72/114 (63.16%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQ-DSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 666
            I++IDN+DSFT+NL Q +  LG    V RND +    + +   + +++SPGP  PQ DSGIS + +      VP+ GVCMGL+C+ + FGG+I  +   +MHGK S + +D +G
Sbjct:   13 ILMIDNFDSFTWNLYQSLCLLGADVTVIRNDAIPRSAIPQLRIKRLIVSPGPGHPQTDSGISREAIKYFAGKVPIMGVCMGLECVVDVFGGQIAYAG-EIMHGKVSGIRHDARG 125          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG2_HALMA (Anthranilate synthase component II OS=Haloarcula marismortui GN=trpG2 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.134e-18
Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYD 657
            I++IDNYDSF YNL QY+GE      V RND + VE +   +P G+++SPGP TP ++G+S+    E     P  GVC+G Q +  A G  +  +P  V+HGK S V +D
Sbjct:    2 ILIIDNYDSFAYNLVQYVGEFD-DVTVRRNDAIDVEGIHELDPDGIVVSPGPGTPAEAGVSIDVFAE--TEYPALGVCLGHQALCAAHGTPVGHAP-SVVHGKPSEVRHD 107          
The following BLAST results are available for this feature:
BLAST of FC923825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
TRPG_ASPNG9.619e-2345.60Anthranilate synthase component 2 OS=Aspergillus n... [more]
PABA_KLEAE9.619e-2349.56Para-aminobenzoate synthase glutamine amidotransfe... [more]
TRPG_SULSO4.774e-2249.53Anthranilate synthase component II OS=Sulfolobus s... [more]
TRPG_EMENI8.143e-2245.61Anthranilate synthase component 2 OS=Emericella ni... [more]
TRPG_YEAST1.064e-2143.86Anthranilate synthase component 2 OS=Saccharomyces... [more]
TRPG_LEPBI3.094e-2141.04Anthranilate synthase component II OS=Leptospira b... [more]
TRPG_ASPAW3.094e-2143.85Anthranilate synthase component 2 OS=Aspergillus a... [more]
TRPG_MYCTU2.006e-2046.55Anthranilate synthase component 2 OS=Mycobacterium... [more]
TRPG_PHACH2.452e-1842.11Anthranilate synthase component 2 OS=Phanerochaete... [more]
TRPG2_HALMA7.134e-1843.64Anthranilate synthase component II OS=Haloarcula m... [more]

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Properties
Property NameValue
Genbank descriptionC31709C11EF StrClemenN Citrus clementina cDNA clone C31709C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923825 ID=FC923825; Name=FC923825; organism=Citrus clementina; type=EST; length=700bp
GACAGTTGCTCAGTTTTTTGTTGTCTTTGAAGTTAAAAAGCGCCTTAGTT
TCATATTCTCAGTCTCGTTCTCTCCTCTCTAGCAACAATGGCGGCAATGG
TTTCGCAGTCAACTCTCATTCAAACAAAACCGTCTCTCTCTTTAAAACCC
TCTCAACGGTTTCGACCCAATCGTCTCTCTGCAATCCCTGAGCCTTCTCC
AGGGCTGAGGTTGGGGGCTAAGAAGGGAAATGGGGCTGTAAAGTTGTCAA
TGGCTGTGGCAGAGGCAGTACCCATTTCGAAGTCTTTATATTTGGATGAT
AAGAAGAGCAAGAATAATAAAAATCCCATCATTGTTATTGATAATTATGA
TAGTTTCACTTACAATCTCTGCCAGTATATGGGCGAGCTTGGTTATCACT
TTGAGGTTTATCGGAATGATGAATTAACTGTGGAGGAGTTAAAACGGAAA
AATCCTAGAGGAGTGCTTATATCCCCTGGGCCGGACACACCTCAAGATTC
TGGAATATCATTGCAGACTGTTTTGGAACTTGGACCTACTGTGCCTCTGT
TTGGTGTTTGTATGGGTTTGCAGTGCATTGGAGAGGCTTTTGGAGGGAAG
ATTGTGCGTTCTCCGCTTGGTGTCATGCATGGAAAAAGTTCTCTTGTGTA
TTATGATGAGAAAGGGGAGGATGGCTTGCTTGCTGGACTATCAATCCTTT
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