FC923861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923861 vs. ExPASy Swiss-Prot
Match: SGCE_ECOLI (Protein sgcE OS=Escherichia coli (strain K12) GN=sgcE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13 Identity = 44/141 (31.21%), Postives = 73/141 (51.77%), Query Frame = 3 Query: 285 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNP 707 +I+ PS+ SAN G ++ A++ +H+D+ D F+ NIT G V A+ T PL H M+ P++ + + VH E + + TL +I+ GA+AG+V NPAT + A + +D V++M+ P Sbjct: 1 MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHPLSFHFMLARPQRWFNALAEIRPAWIFVHAE--TLDYPSETLTEIRHTGARAGLVFNPATPIDAWRYLASELDGVMVMTSEP 139
BLAST of FC923861 vs. ExPASy Swiss-Prot
Match: LSRE_SALTY (Putative epimerase lsrE OS=Salmonella typhimurium GN=lsrE PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13 Identity = 48/150 (32.00%), Postives = 79/150 (52.67%), Query Frame = 3 Query: 291 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGF 713 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + ++ G+ L PAT L I +L V+++ +++VNPG+ Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGY 167
BLAST of FC923861 vs. ExPASy Swiss-Prot
Match: LSRE_SALTI (Putative epimerase lsrE OS=Salmonella typhi GN=lsrE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13 Identity = 48/150 (32.00%), Postives = 79/150 (52.67%), Query Frame = 3 Query: 291 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGF 713 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + ++ G+ L PAT L I +L V+++ +++VNPG+ Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWAAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIDGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGY 167
BLAST of FC923861 vs. ExPASy Swiss-Prot
Match: LSRE_SALPB (Putative epimerase lsrE OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=lsrE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13 Identity = 48/150 (32.00%), Postives = 79/150 (52.67%), Query Frame = 3 Query: 291 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGF 713 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + ++ G+ L PAT L I +L V+++ +++VNPG+ Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGY 167
BLAST of FC923861 vs. ExPASy Swiss-Prot
Match: LSRE_SALCH (Putative epimerase lsrE OS=Salmonella choleraesuis GN=lsrE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13 Identity = 48/150 (32.00%), Postives = 79/150 (52.67%), Query Frame = 3 Query: 291 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGF 713 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + ++ G+ L PAT L I +L V+++ +++VNPG+ Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGY 167
BLAST of FC923861 vs. ExPASy Swiss-Prot
Match: RPE_ENCCU (Ribulose-phosphate 3-epimerase OS=Encephalitozoon cuniculi GN=RPE1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13 Identity = 48/141 (34.04%), Postives = 70/141 (49.65%), Query Frame = 3 Query: 300 SILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH---CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGF 713 SIL NF L E++ ++ G IH+DVMD FV NIT GP +++ + D DVH+M+ P + +V++H C+++ R N + G+ LNP T + E + D VLIMSV PGF Sbjct: 13 SILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILE-HDFVFDVHMMVESPLDIIMQIDLERVSLVTIHSEVCDKAGVAEYLRKRNVL------FGIALNPETQVDDAE--MRSADFVLIMSVKPGF 144 The following BLAST results are available for this feature:
BLAST of FC923861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923861 ID=FC923861; Name=FC923861; organism=Citrus clementina; type=EST; length=713bpback to top |