FC923864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923864 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.887e-14 Identity = 46/122 (37.70%), Postives = 60/122 (49.18%), Query Frame = 1 Query: 295 PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAE 660 PDR ++ P S PE+L G +PGD+G+DP GL P+ EL+H+RWAMLGAAG IPE K G P W+ G +T F + E+VL+G AE Sbjct: 63 PDRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS--WYTAGEQEYFTDTTTLF------------VIELVLIGWAE 165
BLAST of FC923864 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 43/124 (34.68%), Postives = 61/124 (49.19%), Query Frame = 1 Query: 346 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGG 714 P YL G PGD+G+D GL + P + +Y+ ELIH RWAML G I+PEA N W + G Y G+ +P + ++A E + + E+ R + D E K +PGG Sbjct: 56 PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGL--GNWVKAQEW-----AAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR-SMEKDSEKKKYPGG 171
BLAST of FC923864 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12 Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 1 Query: 346 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTG 555 P+YLTG + GD G+DP GL++ P++ + EL++ RWAMLG AG ++PE F K G PE W+ G Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPE--WYDAG 131
BLAST of FC923864 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12 Identity = 46/124 (37.10%), Postives = 63/124 (50.81%), Query Frame = 1 Query: 346 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGG 714 P +L G PGD+G+DP GL+ P++F +++ E+ H RWAML G ++PEA N W A L DG Y G +P NL + E + + AE R T D E K +PGG Sbjct: 55 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGL--GNWVKAQEW----AALPDGQA-TYLGNPVPWGNLPTILAIEFLAIAFAEQQR-TMEKDPEKKKYPGG 170
BLAST of FC923864 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12 Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 346 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTG 555 P YLTG +PGD G+DP GL++ P++ + EL++ RWAMLG AG ++PE F G P+ W+ G Sbjct: 63 PGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPK--WYAAG 130 The following BLAST results are available for this feature:
BLAST of FC923864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923864 ID=FC923864; Name=FC923864; organism=Citrus clementina; type=EST; length=716bpback to top |