FC923895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923895 vs. ExPASy Swiss-Prot
Match: RS19_HUMAN (40S ribosomal protein S19 OS=Homo sapiens GN=RPS19 PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 8.839e-40 Identity = 73/137 (53.28%), Postives = 103/137 (75.18%), Query Frame = 2 Query: 101 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFSRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIVVA 511 TVKDV+ EFV+A +A LK+SGK+++P W D VK A+ KELAPYD +W+Y RAAS AR +YLR G GVGS ++IYGG +RNG P HF + S ++AR +LQ L+ + +++ + GGR++T GQRDLD++AG++ A Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAA 141
BLAST of FC923895 vs. ExPASy Swiss-Prot
Match: RS19_BOVIN (40S ribosomal protein S19 OS=Bos taurus GN=RPS19 PE=2 SV=3) HSP 1 Score: 163.696 bits (413), Expect = 8.839e-40 Identity = 73/137 (53.28%), Postives = 103/137 (75.18%), Query Frame = 2 Query: 101 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFSRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIVVA 511 TVKDV+ EFV+A +A LK+SGK+++P W D VK A+ KELAPYD +W+Y RAAS AR +YLR G GVGS ++IYGG +RNG P HF + S ++AR +LQ L+ + +++ + GGR++T GQRDLD++AG++ A Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAA 141
BLAST of FC923895 vs. ExPASy Swiss-Prot
Match: RS19_AEQIR (40S ribosomal protein S19 OS=Aequipecten irradians GN=RPS19 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.387e-39 Identity = 67/134 (50.00%), Postives = 101/134 (75.37%), Query Frame = 2 Query: 101 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFSRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRI 502 +VKDV H F KA +A LK+SGKM++P W I+K ++F EL+PYD DW+Y RAAS+ R +Y+R GVG+ ++IYG KRNG+ P H+C+SSG++AR +LQ L+ +++ + GGR++TS GQ+DLD++A ++ Sbjct: 4 SVKDVDSHTFTKALAAFLKKSGKMKIPEWATIIKLSKFNELSPYDEDWFYTRAASICRHLYIRSPAGVGALTKIYGDRKRNGTVPSHYCRSSGSVARRVLQALETQKLVEKDANGGRKLTSQGQKDLDRIAAQV 137
BLAST of FC923895 vs. ExPASy Swiss-Prot
Match: RS19_ICTPU (40S ribosomal protein S19 OS=Ictalurus punctatus GN=rps19 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.483e-39 Identity = 74/137 (54.01%), Postives = 101/137 (73.72%), Query Frame = 2 Query: 101 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFSRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIVVA 511 TVKDV+ EFV+A +A LK+SGK+++P W DIVK A+ KELAP D +W+Y+RAAS R +YLR G+GVGS +IYGG KRNG P HF S +AR +LQ L+ + +++ +P GGRR+T G RDLD++AG++ A Sbjct: 7 TVKDVNQQEFVRALAAFLKKSGKLKVPDWVDIVKLAKHKELAPCDDNWFYIRAASTVRHLYLRGGVGVGSMIKIYGGRKRNGVCPSHFSVGSKNVARKVLQALEALKMVEKDPNGGRRLTPQGTRDLDRIAGQVAAA 143
BLAST of FC923895 vs. ExPASy Swiss-Prot
Match: RS19_PIG (40S ribosomal protein S19 (Fragment) OS=Sus scrofa GN=RPS19 PE=2 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 1.276e-38 Identity = 72/132 (54.55%), Postives = 99/132 (75.00%), Query Frame = 2 Query: 101 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFSRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAG 496 TVKDV+ EFV+A +A LK+SGK+++P W D VK A KELAPYD +W+Y RAAS AR +YLR G GVGS ++IYGG +RNG P HF + S ++AR +LQ L+ + +++ + GGR++T GQRDLD++AG Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAXHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAG 136
BLAST of FC923895 vs. ExPASy Swiss-Prot
Match: RS19A_DROME (40S ribosomal protein S19a OS=Drosophila melanogaster GN=RpS19a PE=2 SV=3) HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38 Identity = 72/135 (53.33%), Postives = 99/135 (73.33%), Query Frame = 2 Query: 101 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFSRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIV 505 TVKD+ H KA + LK++GK+++P DIVKTA+FKELAPYDPDW+YVR AS+ R +Y R GVGS ++IYGG KRNG P HFC+++ AR LQ L++ +++ P GGR+++S GQRDLD++A +IV Sbjct: 5 TVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRIANQIV 139
BLAST of FC923895 vs. ExPASy Swiss-Prot
Match: RS19B_SCHPO (40S ribosomal protein S19-B OS=Schizosaccharomyces pombe GN=rps19b PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 2.844e-38 Identity = 72/131 (54.96%), Postives = 94/131 (71.76%), Query Frame = 2 Query: 101 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFSRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVA 493 +VKDV +F+ AY+A LKRSGKM P W DIVKT KELAPYDPDWYYVRAA++AR IYLR+ +GVG ++YGGS G RP H SG++ R ++Q L+ + +++ GGRRI+ GQRDLD++A Sbjct: 5 SVKDVDAQQFINAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRIA 135
BLAST of FC923895 vs. ExPASy Swiss-Prot
Match: RS19A_SCHPO (40S ribosomal protein S19-A OS=Schizosaccharomyces pombe GN=rps19a PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.850e-38 Identity = 72/131 (54.96%), Postives = 94/131 (71.76%), Query Frame = 2 Query: 101 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFSRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVA 493 +VKDV +F+ AY+A LKRSGKM P W DIVKT KELAPYDPDWYYVRAA++AR IYLR+ +GVG ++YGGS G RP H SG++ R ++Q L+ + +++ GGRRI+ GQRDLD++A Sbjct: 5 SVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRIA 135
BLAST of FC923895 vs. ExPASy Swiss-Prot
Match: RS19_GILMI (40S ribosomal protein S19 OS=Gillichthys mirabilis GN=rps19 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.273e-38 Identity = 71/137 (51.82%), Postives = 102/137 (74.45%), Query Frame = 2 Query: 101 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFSRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIVVA 511 TVKDV+ EFV+A +A LK+SGK+++P W D+VK + KELAP D +W+Y+RAAS R +YLR G GVGS ++IYGG +RNG P H+ + S +AR +LQ L+ + +I+ +P GGRR+T+ G RDLD++AG++ A Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGRHKELAPSDENWFYIRAASTVRHLYLRGGAGVGSMTKIYGGRQRNGVCPAHYSEGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVSAA 141
BLAST of FC923895 vs. ExPASy Swiss-Prot
Match: RS19_PAGMA (40S ribosomal protein S19 OS=Pagrus major GN=rps19 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.195e-36 Identity = 69/137 (50.36%), Postives = 100/137 (72.99%), Query Frame = 2 Query: 101 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFSRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIVVA 511 TVKDV+ EFV+A +A LK+SGK+++P W D+VK + KELAP D +W+Y+R+AS R +YLR G GVGS ++IYG +RNG P H+ S +AR +LQ L+ + +I+ +P GGRR+T+ G RDLD++AG++ A Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHLYLRGGAGVGSMTKIYGSRQRNGVCPAHYSVGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVAAA 141 The following BLAST results are available for this feature:
BLAST of FC923895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923895 ID=FC923895; Name=FC923895; organism=Citrus clementina; type=EST; length=712bpback to top |