FC923902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923902 vs. ExPASy Swiss-Prot
Match: RAN_CHICK (GTP-binding nuclear protein Ran OS=Gallus gallus GN=RAN PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14 Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 3 Query: 231 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTK 635 A+Q E FKL+++GD G GK++ + + FE+ T+GV+ +K +WDTAGQE+F L YY AQ I+++DVT R T+ N+ + W + DL ++ +L GNKVD + +V K Sbjct: 2 AAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHR--DLVRVCENIPIVLCGNKVDIKDRKVKAK 134
BLAST of FC923902 vs. ExPASy Swiss-Prot
Match: RAN_CANFA (GTP-binding nuclear protein Ran OS=Canis familiaris GN=RAN PE=1 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14 Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 3 Query: 231 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTK 635 A+Q E FKL+++GD G GK++ + + FE+ T+GV+ +K +WDTAGQE+F L YY AQ I+++DVT R T+ N+ + W + DL ++ +L GNKVD + +V K Sbjct: 2 AAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHR--DLVRVCENIPIVLCGNKVDIKDRKVKAK 134
BLAST of FC923902 vs. ExPASy Swiss-Prot
Match: RAN_BOVIN (GTP-binding nuclear protein Ran OS=Bos taurus GN=RAN PE=2 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14 Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 3 Query: 231 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTK 635 A+Q E FKL+++GD G GK++ + + FE+ T+GV+ +K +WDTAGQE+F L YY AQ I+++DVT R T+ N+ + W + DL ++ +L GNKVD + +V K Sbjct: 2 AAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHR--DLVRVCENIPIVLCGNKVDIKDRKVKAK 134
BLAST of FC923902 vs. ExPASy Swiss-Prot
Match: RAB24_MOUSE (Ras-related protein Rab-24 OS=Mus musculus GN=Rab24 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14 Identity = 46/118 (38.98%), Postives = 64/118 (54.24%), Query Frame = 3 Query: 261 KLLMIGDSGVGKSSLLLSFTSDNF--EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVD 608 K++M+G VGK+SL+ + D F TIG F K + VG + + L IWDTAG ER+ ++ YYRGA+ I+ YD+T +F + W KE L S + C L G K D Sbjct: 9 KVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMCVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFER-AKFWVKE--LRSLEEGCQIYLCGTKSD 123
BLAST of FC923902 vs. ExPASy Swiss-Prot
Match: RHOH_MOUSE (Rho-related GTP-binding protein RhoH OS=Mus musculus GN=Rhoh PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14 Identity = 45/116 (38.79%), Postives = 67/116 (57.76%), Query Frame = 3 Query: 261 KLLMIGDSGVGKSSLLLSFTSDNFEEL-SPTI----GVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 593 K +++GDS VGK+SLL+ FTS+ F E PT+ GVD V + G ++ L +WDTAG + FR++ Y+ A ++M Y V ++F NL + W EI +N C +LV Sbjct: 6 KCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVD-----VFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWISEI---RSNLPCTPVLV 113
BLAST of FC923902 vs. ExPASy Swiss-Prot
Match: RHOC_CHICK (Rho-related GTP-binding protein RhoC OS=Gallus gallus GN=RHOC PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14 Identity = 42/121 (34.71%), Postives = 70/121 (57.85%), Query Frame = 3 Query: 261 KLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESE 620 KL+++GD GK+ LL+ F+ D F E+ PT+ ++ + ++V GK+++LA+WDTAGQE + L Y I+M + + D+ N+ + W E+ + N I LVGNK D ++ Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-IADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPII--LVGNKKDLRND 124
BLAST of FC923902 vs. ExPASy Swiss-Prot
Match: RHOB_RAT (Rho-related GTP-binding protein RhoB OS=Rattus norvegicus GN=Rhob PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14 Identity = 45/124 (36.29%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 261 KLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVV 629 KL+++GD GK+ LL+ F+ D F E+ PT+ ++ V ++V GK+++LA+WDTAGQE + L Y I+M + V D+ N+ + W E+ + N I LV NK D S+ V Sbjct: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPII--LVANKKDLRSDEHV 127
BLAST of FC923902 vs. ExPASy Swiss-Prot
Match: RHOB_MOUSE (Rho-related GTP-binding protein RhoB OS=Mus musculus GN=Rhob PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14 Identity = 45/124 (36.29%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 261 KLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVV 629 KL+++GD GK+ LL+ F+ D F E+ PT+ ++ V ++V GK+++LA+WDTAGQE + L Y I+M + V D+ N+ + W E+ + N I LV NK D S+ V Sbjct: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPII--LVANKKDLRSDEHV 127
BLAST of FC923902 vs. ExPASy Swiss-Prot
Match: RHOB_HUMAN (Rho-related GTP-binding protein RhoB OS=Homo sapiens GN=RHOB PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14 Identity = 45/124 (36.29%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 261 KLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVV 629 KL+++GD GK+ LL+ F+ D F E+ PT+ ++ V ++V GK+++LA+WDTAGQE + L Y I+M + V D+ N+ + W E+ + N I LV NK D S+ V Sbjct: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPII--LVANKKDLRSDEHV 127
BLAST of FC923902 vs. ExPASy Swiss-Prot
Match: RHOB_BOVIN (Rho-related GTP-binding protein RhoB OS=Bos taurus GN=RHOB PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14 Identity = 45/124 (36.29%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 261 KLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVV 629 KL+++GD GK+ LL+ F+ D F E+ PT+ ++ V ++V GK+++LA+WDTAGQE + L Y I+M + V D+ N+ + W E+ + N I LV NK D S+ V Sbjct: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPII--LVANKKDLRSDEHV 127 The following BLAST results are available for this feature:
BLAST of FC923902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923902 ID=FC923902; Name=FC923902; organism=Citrus clementina; type=EST; length=675bpback to top |