FC923918

Overview
NameFC923918
Unique NameFC923918
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923918 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26
Identity = 63/155 (40.65%), Postives = 94/155 (60.65%), Query Frame = 2
Query:  173 RYSYPEIIAVTNHFTHKL--GQGGFGSVYKGQLHTDCLIAVKM-LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHIFPKESRGQSFSWERLQEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPR 628
            R S+ E+ + TN+F   L  G GGFG V++G L  +  +AVK     S+    EF++E++ + +I H ++V L+G+C E S+  LVYEYM  G L  H++   S     SW++  EV +G ARG+ YLH G    I+H DIK  NILLD+N++ +
Sbjct:  476 RISFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYG--STNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAK 628          
BLAST of FC923918 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26
Identity = 62/166 (37.35%), Postives = 98/166 (59.04%), Query Frame = 2
Query:  176 YSYPEIIAVTNHFTHK--LGQGGFGSVYKGQLH-TDCLIAVKMLENSKFSAE-EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHIFPKESRGQSFSWERLQEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPRSQTSALQSFIP 661
            +++ E+ A T +F     LG+GGFG VYKG+L  T  ++AVK L+ +      EF+ EV  +  +HH N+V L+G+C++G +R LVYE+MP GSL+ H+       ++  W    ++A G A+G+E+LH+  +  +++ D K  NILLD  F P+     L    P
Sbjct:   74 FAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGP 239          
BLAST of FC923918 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26
Identity = 70/149 (46.98%), Postives = 91/149 (61.07%), Query Frame = 2
Query:  173 RYSYPEIIAVTNHF--THKLGQGGFGSVYKGQLHTDCLIAVKMLENSKFSAE-EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHIFPKESRGQS-FSWERLQEVALGTARGIEYLHNGCDVCILHFDIKPHNILL 607
            ++ +  I A TN F  T+KLGQGGFG VYKG   +   +AVK L  +    E EF NEV  + ++ H N+V+LLGFC E  +R LVYE++PN SLD  IF  +S  QS   W R  ++  G ARGI YLH    + I+H D+K  NILL
Sbjct:  338 QFDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIF--DSTMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILL 484          
BLAST of FC923918 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.839e-26
Identity = 61/148 (41.22%), Postives = 86/148 (58.11%), Query Frame = 2
Query:  176 YSYPEIIAVTNHFT--HKLGQGGFGSVYKGQLHTDCLIAVKMLEN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHIFPKESRGQSFSWERLQEVALGTARGIEYLHNGCDVCILHFDIKPHNILLD 610
            ++  +I   TN+F   +K+G+GGFG VYKG L     IAVK L + SK    EF+ E+  I  + H N+V+L G C EG +  LVYEY+ N SL R +F  E +     W    ++ +G A+G+ YLH    + I+H DIK  N+LLD
Sbjct:  657 FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLD 804          

HSP 2 Score: 25.0238 bits (53), Expect = 2.839e-26
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 1
Query:  625 KVSDFGLAKFHPKEN 669
            K+SDFGLAK +  EN
Sbjct:  810 KISDFGLAKLNDDEN 824          
BLAST of FC923918 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.874e-26
Identity = 62/151 (41.06%), Postives = 92/151 (60.93%), Query Frame = 2
Query:  176 YSYPEIIAVTNHFTHK--LGQGGFGSVYKGQLHTDCLIAVKMLENSKFSAE-EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHIFPKESRGQSFSWERLQEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF 619
            Y+  E+ A TN    +  +G+GG+G VY+G L     +AVK L N++  AE EF  EV  IGR+ H N+V+LLG+C EG+ R LVY+++ NG+L++ I          +W+    + LG A+G+ YLH G +  ++H DIK  NILLD  +
Sbjct:  142 YTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQW 292          

HSP 2 Score: 23.483 bits (49), Expect = 2.874e-26
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  616 FHPKVSDFGLAKFHPKENDF 675
            ++ KVSDFGLAK    E+ +
Sbjct:  292 WNAKVSDFGLAKLLGSESSY 311          
BLAST of FC923918 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.881e-26
Identity = 66/178 (37.08%), Postives = 106/178 (59.55%), Query Frame = 2
Query:  137 KFLHNQQSWMPKRYSYPEIIAVTNHFTHKL--GQGGFGSVYKGQLHTD-------CLIAVKMLENSKFSA-EEFINEVSTIGRIHHVNVVQLLGFCSE----GSKRALVYEYMPNGSLDRHIFPKESRGQSFSWERLQEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPR 628
            K L+ ++    + +SY E+   T  F+ KL  G+GGFG VYKG++ ++        ++A+K L        ++++ EV  +G ++H NVV+L+G+CSE    G +R LVYEYM N SL+ H+FP+  R  +  W++  E+ LG A G+ YLH   D+ +++ D K  N+LLD  F P+
Sbjct:   61 KDLYTEREQNLRVFSYEELSKATYVFSRKLVIGEGGFGIVYKGKILSNGDSSDPPLVVAIKKLNRQGLQGHKQWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPR--RSHTLPWKKRLEIMLGAAEGLTYLH---DLKVIYRDFKSSNVLLDDQFCPK 233          

HSP 2 Score: 23.8682 bits (50), Expect = 2.881e-26
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 1
Query:  616 FHPKVSDFGLAKFHP 660
            F PK+SDFGLA+  P
Sbjct:  230 FCPKLSDFGLAREGP 244          
BLAST of FC923918 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26
Identity = 59/151 (39.07%), Postives = 92/151 (60.93%), Query Frame = 2
Query:  170 KRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHTDCLIAVKMLENSKFSA-EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHIFPKESRGQSFSWERLQEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNF 619
            ++++Y E+  +TN+F   +G+GGFG V  G ++    +AVK+L  S     +EF  EV  + R+HH N+V L+G+C EG   AL+YE++PNG L +H+  K  +    +W     +A   A G+EYLH GC   ++H D+K  NILLD ++
Sbjct:  568 RKFTYSEVTKMTNNFGRVVGEGGFGVVCHGTVNGSEQVAVKLLSQSSTQGYKEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSGKGGK-PIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRDVKTTNILLDEHY 717          
BLAST of FC923918 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 3.719e-26
Identity = 79/216 (36.57%), Postives = 117/216 (54.17%), Query Frame = 2
Query:    5 SLPGFPFDVLNVLIIGRFILAPIVFVV-----FLIQKYRKSLKRIDNVEKFLHNQQSWMPKRYSYPEIIAVTNHF--THKLGQGGFGSVYKGQLHTDCLIAVKML-ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHIFPKESRGQSFSWERLQEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPR 628
            SLPG   +   VL++   +LA ++F+      FL +K +K+     +  +   +  +    +  Y  I   TN F  ++K+G+GGFG VYKG       +AVK L +NS+    EF  EV  + ++ H N+V+LLGF  +G +R LVYEYMPN SLD  +F    + Q   W +   +  G ARGI YLH    + I+H D+K  NILLD +  P+
Sbjct:  279 SLPGKSGNS-TVLVVAVVVLAVLLFIALVGYCFLAKKKKKTFDTA-SASEVGDDMATADSLQLDYRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQIQ-LDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPK 491          

HSP 2 Score: 21.1718 bits (43), Expect = 3.719e-26
Identity = 6/11 (54.55%), Postives = 11/11 (100.00%), Query Frame = 1
Query:  619 HPKVSDFGLAK 651
            +PK++DFG+A+
Sbjct:  489 NPKIADFGMAR 499          
BLAST of FC923918 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26
Identity = 59/156 (37.82%), Postives = 94/156 (60.26%), Query Frame = 2
Query:  170 KRYSYPEIIAVTNHFTHK--LGQGGFGSVYKGQLHTDCLIAVKMLENSKFSAE-EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHIFPKESRGQSFSWERLQEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPR 628
            ++ ++ +++  TN F +   +G GGFG VYK  L     +A+K L +     + EF+ E+ TIG+I H N+V LLG+C  G +R LVYE+M  GSL+  +   +  G   +W   +++A+G+ARG+ +LH+ C   I+H D+K  N+LLD N   R
Sbjct:  869 RKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEAR 1024          
BLAST of FC923918 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 4.840e-26
Identity = 73/193 (37.82%), Postives = 107/193 (55.44%), Query Frame = 2
Query:   59 ILAPIVFVVFLIQKYRKSLKRIDNVEKFLHNQQSWMPKRYSYPEIIAVTNHFT--HKLGQGGFGSVYKGQLHTDCLIAVKMLENSKFSAE-EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEYMPNGSLDRHIFPKESRGQSFSWERLQEVALGTARGIEYLHNGCDVCILHFDIKPHNILLDHNFIPR 628
            ++  I+ VV L+   R+  K+   +   L+  +S    ++    I A T +F+  +KLG GGFG VYKG L     IAVK L  +    E EF NEV  + ++ H+N+V+LLGF  +G ++ LVYE++PN SLD  +F    R Q   W   + +  G  RGI YLH    + I+H D+K  NILLD +  P+
Sbjct:  311 VVTIILIVVGLVICKRRKQKQEIELPIVLNEAES---VQFDLKTIEAATGNFSEHNKLGAGGFGEVYKGMLLNGTEIAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFDPNKRNQ-LDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPK 499          

HSP 2 Score: 21.1718 bits (43), Expect = 4.840e-26
Identity = 6/11 (54.55%), Postives = 11/11 (100.00%), Query Frame = 1
Query:  619 HPKVSDFGLAK 651
            +PK++DFG+A+
Sbjct:  497 NPKIADFGMAR 507          
The following BLAST results are available for this feature:
BLAST of FC923918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 309
Match NameE-valueIdentityDescription
Y5241_ARATH2.283e-2640.65Probable receptor-like protein kinase At5g24010 OS... [more]
PBS1_ARATH2.283e-2637.35Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
CRK4_ARATH2.283e-2646.98Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
Y5343_ARATH2.839e-2641.22Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH2.874e-2641.06Probable serine/threonine-protein kinase At1g01540... [more]
Y5707_ARATH2.881e-2637.08Probable receptor-like protein kinase At5g47070 OS... [more]
Y5596_ARATH2.982e-2639.07Probable LRR receptor-like serine/threonine-protei... [more]
CRK6_ARATH3.719e-2636.57Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
BRI1_ARATH3.894e-2637.82Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
CRK17_ARATH4.840e-2637.82Cysteine-rich receptor-like protein kinase 17 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC31710D09EF StrClemenN Citrus clementina cDNA clone C31710D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923918 ID=FC923918; Name=FC923918; organism=Citrus clementina; type=EST; length=676bp
GTTCTCCTTACCAGGGTTTCCATTCGATGTTCTGAATGTTCTGATAATTG
GTAGATTTATTCTTGCTCCAATAGTCTTTGTCGTGTTCCTTATCCAAAAG
TACAGAAAATCATTGAAGAGGATTGATAATGTGGAGAAATTTCTGCACAA
TCAGCAATCGTGGATGCCTAAAAGGTATTCTTACCCGGAGATAATTGCCG
TGACAAACCACTTCACTCATAAATTAGGCCAAGGTGGCTTTGGTTCGGTT
TATAAAGGACAACTTCATACGGATTGCTTGATTGCTGTTAAGATGCTGGA
GAACTCCAAGTTCAGTGCGGAGGAATTCATCAATGAAGTTTCAACAATTG
GTAGAATTCACCACGTTAATGTAGTCCAGCTATTGGGGTTCTGTTCCGAG
GGATCCAAACGGGCACTTGTGTACGAGTATATGCCCAATGGATCACTCGA
TAGGCATATCTTTCCCAAGGAGAGTAGAGGCCAATCTTTTAGTTGGGAGA
GACTCCAGGAAGTTGCTTTAGGAACTGCCCGTGGGATCGAGTATTTACAC
AACGGATGTGATGTCTGCATTCTTCATTTTGACATTAAGCCTCACAACAT
CCTGCTAGATCATAATTTCATCCCAAGGTCTCAGACTTCGGCCTTGCAAA
GTTTCATCCCAAGGAAAATGATTTTG
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