FC923921
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923921 vs. ExPASy Swiss-Prot
Match: RL10B_SCHPO (60S ribosomal protein L10-B OS=Schizosaccharomyces pombe GN=rpl10b PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 4.577e-75 Identity = 134/197 (68.02%), Postives = 159/197 (80.71%), Query Frame = 1 Query: 73 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVSR*WGFTKFSRSDYLRFKSEKRIVPDGVNA 663 M RRPARCYR KNKPYPKSR+ R VPD KIRI+D+G K+ GVDEFP C+HLVS E E ++SEALEAARI NKY+ K GKD+FHLRVR HPFHV+RINKMLSCAGADRLQTGMR AFGKP G ARV IGQVL+SVR KDS+ A EALRR ++KFPG+Q+IIVS+ WGF++++R +Y+ +S I+PDG A Sbjct: 1 MARRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQITSEALEAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFGKPNGLVARVNIGQVLMSVRTKDSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRSRGEIIPDGCYA 197
BLAST of FC923921 vs. ExPASy Swiss-Prot
Match: RL10A_SCHPO (60S ribosomal protein L10-A OS=Schizosaccharomyces pombe GN=rpl10a PE=2 SV=2) HSP 1 Score: 280.411 bits (716), Expect = 5.978e-75 Identity = 133/197 (67.51%), Postives = 159/197 (80.71%), Query Frame = 1 Query: 73 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVSR*WGFTKFSRSDYLRFKSEKRIVPDGVNA 663 M RRPARCYR KNKPYPKSR+ R VPD KIRI+D+G K+ GVDEFP C+HLVS E E ++SEALEAARI NKY+ K GKD+FHLRVR HPFHV+RINKMLSCAGADRLQTGMR AFGKP G ARV IGQ+L+SVR KDS+ A EALRR ++KFPG+Q+IIVS+ WGF++++R +Y+ +S I+PDG A Sbjct: 1 MARRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQITSEALEAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFGKPNGLVARVNIGQILMSVRTKDSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRSRGEIIPDGCYA 197
BLAST of FC923921 vs. ExPASy Swiss-Prot
Match: RL10_YEAST (60S ribosomal protein L10 OS=Saccharomyces cerevisiae GN=RPL10 PE=1 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 1.628e-72 Identity = 134/194 (69.07%), Postives = 151/194 (77.84%), Query Frame = 1 Query: 73 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVSR*WGFTKFSRSDYLRFKSEKRIVPDG 654 M RRPARCYR KNKPYPKSR+ R VPD KIRIYD+G KK VDEFP CVHLVS E E +SSEALEAARI NKYM +G+DAFHLRVRVHPFHVLRINKMLSCAGADRLQ GMRGA+GKP G ARV IGQ++ SVR KDSN E LRRA++KFPG+QKII+S+ WGFT R +YL+ + + DG Sbjct: 1 MARRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVHLVSNELEQLSSEALEAARICANKYMTTVSGRDAFHLRVRVHPFHVLRINKMLSCAGADRLQQGMRGAWGKPHGLAARVDIGQIIFSVRTKDSNKDVVVEGLRRARYKFPGQQKIILSKKWGFTNLDRPEYLKKREAGEVKDDG 194
BLAST of FC923921 vs. ExPASy Swiss-Prot
Match: RL10_EUGGR (60S ribosomal protein L10 OS=Euglena gracilis GN=RPL10 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 2.690e-67 Identity = 124/200 (62.00%), Postives = 147/200 (73.50%), Query Frame = 1 Query: 73 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVSR*WGFTKFSRSDYLRFKSEKRIVPDGVNA*LL 672 MGRRPA+CYR KNK YPKSR+CRGVP+ KIRIYD GM+K D FP HL+S E+E + SEALEAARI NKYM K AGK+A+H+RVRVHPFHV RINKMLSCAGADRLQ GMRGAFGKP G ARV IGQ L+S+R K + AL+RA +KF GRQ I S WGFT+ +Y+++K E + DGV+ +L Sbjct: 1 MGRRPAKCYRYCKNKAYPKSRYCRGVPEAKIRIYDCGMRKLNADTFPLTYHLISMEREQIGSEALEAARINANKYMIKNAGKEAYHIRVRVHPFHVCRINKMLSCAGADRLQQGMRGAFGKPNGLAARVRIGQPLMSIRVKPQHEAVVVAALKRASYKFAGRQVIAKSTMWGFTEIRSENYVKWKEEGKFRVDGVSTKIL 200
BLAST of FC923921 vs. ExPASy Swiss-Prot
Match: RL10_ENCCU (60S ribosomal protein L10 OS=Encephalitozoon cuniculi GN=RPL10 PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.381e-63 Identity = 123/194 (63.40%), Postives = 144/194 (74.23%), Query Frame = 1 Query: 73 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVSR*WGFTKFSRSDYLRFKSEKRIVPDG 654 MGRRP RCYR + K YPKSRF RGVPD KI+I+D+G +K GV EFP V+ +S E+EN+S+EALEAARI NKYM K AGKD FHLR+RV+PFHVLRINKMLSCAGADRLQTGMRG+FGKP G ARV Q +LS+R K+S A EALRRAK KFPG QKI VS +GFT ++ + RI+ G Sbjct: 1 MGRRPGRCYRYLSKKAYPKSRFNRGVPDSKIQIFDLGRRKAGVLEFPLLVNCISNERENLSAEALEAARICANKYMVKHAGKDNFHLRIRVYPFHVLRINKMLSCAGADRLQTGMRGSFGKPYGRAARVVFNQPILSIRTKESFRDAAVEALRRAKNKFPGHQKIQVSSKFGFTNMFSDEFNKLNESGRIILRG 194
BLAST of FC923921 vs. ExPASy Swiss-Prot
Match: RL10_TOBAC (60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum GN=RPL10 PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.094e-60 Identity = 114/131 (87.02%), Postives = 118/131 (90.08%), Query Frame = 1 Query: 286 CNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVSR*WGFTKFSRSDYLRFKSEKRIVPDGVNA*LLGC 678 C A AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD N+ HAQEALRRAKFKFP RQKIIVSR WGFTKFSR+DYL++KSE RIVPDGVNA LLGC Sbjct: 1 CGGCEAGSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNANHAQEALRRAKFKFPRRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGC 131
BLAST of FC923921 vs. ExPASy Swiss-Prot
Match: RL10_METKA (50S ribosomal protein L10e OS=Methanopyrus kandleri GN=rpl10e PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.439e-37 Identity = 82/169 (48.52%), Postives = 110/169 (65.09%), Query Frame = 1 Query: 73 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVSR 579 M RPAR YR+ K Y + + +GVPDPKI+ +D+G +F V LV+ E+ V+ ALEAAR+A N+Y+ K G+ +HL++RV+P HVLR N + + AGADR+Q GMR AFGKP GT ARV GQ +++VR N HA+EALRRA KFP I+V + Sbjct: 1 MVNRPARIYREWKGPAYTRREYIKGVPDPKIQQFDMG---NPAGDFDVEVSLVARERAQVTHNALEAARVAANRYLTKTVGRQNYHLKIRVYPHHVLRENPLATGAGADRVQEGMRLAFGKPIGTAARVREGQRVVTVRIDPENFEHAKEALRRAGMKFPFPFTIVVDK 166
BLAST of FC923921 vs. ExPASy Swiss-Prot
Match: RL10_AERPE (50S ribosomal protein L10e OS=Aeropyrum pernix GN=rpl10e PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.490e-33 Identity = 76/167 (45.51%), Postives = 103/167 (61.68%), Query Frame = 1 Query: 73 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIV 573 M RPARCY PY + + GVP PKI +++G ++ ++++ LV E + ALEAARIA NKY+A G F+ R+RV+P HV+R NKM++ AGADRLQ GMR AFGKP GT ARV G V+L V + + + +EALRR KFP +I++ Sbjct: 1 MPLRPARCYTHFSGPPYTRREYIHGVPPPKITRFEMGNREM-MEKWEIKGELVMLEAGQIRHNALEAARIAVNKYLATTIGDKNFYFRIRVYPHHVIRENKMMAFAGADRLQDGMRQAFGKPVGTAARVYPGTVVLEVWARKGDEENVKEALRRGASKFPLPSRIVI 166
BLAST of FC923921 vs. ExPASy Swiss-Prot
Match: RL10_STAMF (50S ribosomal protein L10e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.261e-32 Identity = 74/166 (44.58%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 73 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKII 570 M RPARCY PY + + GVP PKI +++G ++ + LV E + ALEAAR+ NKY++ G + L++RV+P HVLR NKM++ AGADRLQ GMR AFGKP GT ARV G +++ VR + + HA+EALRRA K P +I+ Sbjct: 1 MPLRPARCYTHFSGPPYTRREYIPGVPQPKIVKFEMGNVH---GDYDYRAELVMIEAGQIRHNALEAARVMANKYLSSTVGDQNYFLKIRVYPHHVLRENKMMAFAGADRLQDGMRQAFGKPIGTAARVYPGTIVMEVRVRKEHVEHAKEALRRAASKLPLPARIV 163
BLAST of FC923921 vs. ExPASy Swiss-Prot
Match: RL10_PYRCJ (50S ribosomal protein L10e OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.258e-32 Identity = 76/168 (45.24%), Postives = 99/168 (58.93%), Query Frame = 1 Query: 73 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIV 573 M RPARCYR+IK PY + + G P +I +D+G F LV+ E+ + +ALEAAR +KY+ K+ G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ V K + H +EALRRA K P +I+V Sbjct: 1 MPARPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARAAFTMVAKLVAEERGQIRMQALEAARQISSKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVIFYVEFKPEHLAHVKEALRRAASKLPIPTRIVV 168 The following BLAST results are available for this feature:
BLAST of FC923921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923921 ID=FC923921; Name=FC923921; organism=Citrus clementina; type=EST; length=680bpback to top |