FC923922
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.203e-26 Identity = 69/191 (36.13%), Postives = 94/191 (49.21%), Query Frame = 1 Query: 10 SGSPEVSKREIAAFFAHVTHET---------GHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGF--DGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 486 +G K+EIAAFF +HET G +C++ +I++S+RY YGRGPIQLT NY AG+ IG D + P+ VA DP++SF+TA+WFWMT + H V+ G+G ING +EC V++RIG+Y+ YC V G NL C N Sbjct: 72 TGDDTARKKEIAAFFGQTSHETKGGSAGTFTGGYCFVRQIDQSDRY----------------YGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNN 246
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.875e-26 Identity = 69/191 (36.13%), Postives = 93/191 (48.69%), Query Frame = 1 Query: 10 SGSPEVSKREIAAFFAHVTHET---------GHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGF--DGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 486 +G K+EIAAFF +HET G +C++++I +S+RY YGRGPIQLT NY AG+ IG + + P+ VA DP++SFKTA+WFWMT + H V+ G+G ING ECG ++RIG+Y+ YC V G NL C N Sbjct: 72 AGDDTARKKEIAAFFGQTSHETNGGSAGTFTGGYCFVKQIEQSDRY----------------YGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNN 246
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.674e-24 Identity = 68/172 (39.53%), Postives = 87/172 (50.58%), Query Frame = 1 Query: 10 SGSPEVSKREIAAFFAHVTHETGHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAP 462 +GS +V KRE+AAF A +HET + + + Y Y+GRGPIQ++ N NYGAAGKAIG D LR P+ V D V FKTA+WFWMT + H V+ G+G I+G VECG Q + V RIGYYKD + + P Sbjct: 38 TGSTDVRKREVAAFLAQTSHET-----------TGGWPTAPDGPYELGSTSDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYKDNLDCYNQKP 198
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: IAMY_COILA (Alpha-amylase inhibitor/endochitinase (Fragments) OS=Coix lachryma-jobi PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.729e-24 Identity = 61/141 (43.26%), Postives = 74/141 (52.48%), Query Frame = 1 Query: 52 FAHVTHETGHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 474 FAHVTHETG+ N YCD Q PC GK YYGRGPIQ++ N NYG AG+AIG DGL P+ VA+D + +KTA+ F +NG G A + YY+ YC + GV PGPNL Sbjct: 24 FAHVTHETGN----------NAYCDPSKTQKPCAAGKKYYGRGPIQISXNYNYGPAGRAIGMDGLGNPDRVAQDALDDYKTALXF------------------LVNGEEAVPGLSAANA---VSYYRQYCQQLGVDPGPNL 133
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 1.567e-22 Identity = 69/184 (37.50%), Postives = 94/184 (51.09%), Query Frame = 1 Query: 4 FGS-GSPEVSKREIAAFFAHVTHETGH------------FCYIEEINKS-NRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVNQGFGATIQRINGAV-------ECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 474 FG+ G KRE+AAF AH++ T C+I + N +C + +PC GK Y RGPIQLT N NYG AG+AIG D ++ P+ V KDP++SFKTA+WFWM+ + H +V A + N V G A + IG+YK YC+ GV+ G +L Sbjct: 170 FGTIGDVATRKREVAAFLAHISQATSGERSDVENPHAWGLCHINTTTVTENDFCTSSD--WPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVLNANSAANRIPNKGVIGNIISRAFGHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 4.415e-17 Identity = 59/179 (32.96%), Postives = 77/179 (43.02%), Query Frame = 1 Query: 10 SGSPEVSKREIAAFFAHVTHETGHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVNQ---------------GFGATIQRINGAVECGGKQPAQV-QARIGYYKDYCNKFGVAPGPNLSC 480 +G + KREIAAF +HET N +P G Y G + N NYG G + L+ PE V DP ++FKTA+WFWMT + H V+ + G+G ING +ECG P + RIG+YK YC+ G G NL C Sbjct: 130 TGDDLMRKREIAAFLGQTSHET-------------------NGWWPAAQGD-QYDWGYCHM--NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDC 286 The following BLAST results are available for this feature:
BLAST of FC923922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923922 ID=FC923922; Name=FC923922; organism=Citrus clementina; type=EST; length=596bpback to top |