FC923949

Overview
NameFC923949
Unique NameFC923949
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length605
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_MOUSE (Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus GN=Asns PE=2 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 1.972e-36
Identity = 83/180 (46.11%), Postives = 117/180 (65.00%), Query Frame = 1
Query:   19 MVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLT 549
            ++ SGEGSDE+  GY+YFHKAP+ E+   E+   +K L+ +D LRA+++T+A GLE RVPFLD  F +  +++ P+ ++  P+ G IEK +LR+ F+D     LPK +L+R KE FSDG   V  SW   L+ + E  V D+M+  A   FP NTP TKE Y+YR IFER +P  +  LT
Sbjct:  360 VIFSGEGSDELTQGYIYFHKAPSPEKAEEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPDMRI--PKNG-IEKHLLRETFEDCN--LLPKEILWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDEMMSAASQKFPFNTPKTKEGYFYRQIFERHYPGRADWLT 534          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_MESAU (Asparagine synthetase [glutamine-hydrolyzing] OS=Mesocricetus auratus GN=ASNS PE=1 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 1.972e-36
Identity = 83/180 (46.11%), Postives = 115/180 (63.89%), Query Frame = 1
Query:   19 MVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLT 549
            ++ SGEGSDE+  GY+YFHKAP+ E+   E+   +K L+ +D LRA+++T+A GLE RVPFLD  F +  +++ PE ++  P+ G IEK +LR+ F+D     LPK +L+R KE FSDG   V  SW   L+ + E  V D M+  A   FP NTP TKE Y+YR IFE  +P  +  LT
Sbjct:  360 VIFSGEGSDELTQGYIYFHKAPSPEKAEEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPEMRV--PKNG-IEKHLLRETFEDSN--LLPKEILWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDAMMATAAQKFPFNTPKTKEGYFYRQIFEHHYPGRADWLT 534          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_CHICK (Asparagine synthetase [glutamine-hydrolyzing] OS=Gallus gallus GN=ASNS PE=2 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 2.575e-36
Identity = 80/179 (44.69%), Postives = 119/179 (66.48%), Query Frame = 1
Query:   19 MVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVG---YSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARL 546
            ++ SGEGSDE+  GY+YFHKAP+ EE   E+   +K L+ +D LRA+++T+A GLE RVPFLD  F +  +++  E ++  P+ G IEK++LR++F+D     LPK +L+R KE FSDG+     SW   L+ + +Q V D +++ A   +P N P TKE+YYYR IFE+ +P  S+ L
Sbjct:  360 VIFSGEGSDELTQGYIYFHKAPSPEEAAEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFTSYYLSLPAELRI--PKNG-IEKYLLRQSFEDSN--LLPKEILWRPKEAFSDGIASVKKSWFSILQDYIDQQVDDLLLEKAAEKYPFNPPRTKESYYYRQIFEKHYPGRSSWL 533          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_BOVIN (Asparagine synthetase [glutamine-hydrolyzing] OS=Bos taurus GN=ASNS PE=2 SV=3)

HSP 1 Score: 145.976 bits (367), Expect = 1.413e-34
Identity = 78/173 (45.09%), Postives = 112/173 (64.74%), Query Frame = 1
Query:   19 MVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFP 528
            ++ SGEGSDE+  GY+YFHKAP+ E+   E+   ++ L+ +D LRA+++T+A GLE RVPFLD  F +  +++ P+ ++  P+ G IEK +LR+ F+D     +PK +L+R KE FSDG   V  SW   L+ + E  V D  + +A   FP NTP TKE YYYR IFE  +P
Sbjct:  360 VIFSGEGSDELTQGYIYFHKAPSPEKAEEESERLLRELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPDMRV--PKNG-IEKHLLRETFEDSN--LIPKEILWRPKEAFSDGITSVKNSWFRILQDYIEHQVDDAAMASAAQKFPINTPKTKEGYYYRQIFENHYP 527          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_MIMIV (Probable asparagine synthetase [glutamine-hydrolyzing] OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R475 PE=3 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 2.112e-30
Identity = 73/174 (41.95%), Postives = 106/174 (60.92%), Query Frame = 1
Query:   13 VKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVG---YSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFF 525
            +++++SGEGSDEI G Y Y   APN +EFH+ET   ++ L+ +D  R +++ +  GLE RVPFLD ++++  M IDP   M   +   IEK I+R AF    + YLP+++LYR KE FSD V     +W   ++   E+  TD+ +QN+ Y F  N P  KEA YYR IF   +
Sbjct:  355 IRVLLSGEGSDEIHGSYKYMRSAPNSQEFHKETIRLLEELYLFDNKRTDRTMAGNGLEVRVPFLDFNYVDFIMNIDPNLLMY--KSDYIEKKIIRDAF----KGYLPENILYRPKEAFSDAVSSKEINWYRSIQKITEEIYTDEKLQNSNYKF--NKPEIKEALYYRDIFNSHY 520          
The following BLAST results are available for this feature:
BLAST of FC923949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ASNS_MOUSE1.972e-3646.11Asparagine synthetase [glutamine-hydrolyzing] OS=M... [more]
ASNS_MESAU1.972e-3646.11Asparagine synthetase [glutamine-hydrolyzing] OS=M... [more]
ASNS_CHICK2.575e-3644.69Asparagine synthetase [glutamine-hydrolyzing] OS=G... [more]
ASNS_BOVIN1.413e-3445.09Asparagine synthetase [glutamine-hydrolyzing] OS=B... [more]
ASNS_MIMIV2.112e-3041.95Probable asparagine synthetase [glutamine-hydrolyz... [more]

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Properties
Property NameValue
Genbank descriptionC31710H02EF StrClemenN Citrus clementina cDNA clone C31710H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923949 ID=FC923949; Name=FC923949; organism=Citrus clementina; type=EST; length=605bp
AAATCTCTAGGAGTGAAGATGGTGATATCGGGTGAGGGATCTGATGAGAT
TTTTGGTGGCTATTTGTACTTCCACAAGGCACCCAATAAGGAAGAATTCC
ACCGCGAAACATGTCACAAGATAAAGGCTCTCCACCAGTATGATTGCTTG
AGAGCTAACAAATCAACATCTGCTTGGGGTCTAGAAGCACGAGTCCCCTT
CCTTGACAAAGATTTTATTAATGTAGCAATGGCCATTGATCCTGAGTGGA
AGATGATTAATCCTCAAGAAGGACGTATCGAGAAGTGGATCCTTAGGAAG
GCCTTCGATGATGAGGAGCGACCCTATCTGCCAAAGCATGTTCTGTACAG
ACAGAAGGAACAATTCAGTGATGGTGTTGGCTATAGTTGGATTGATGGCC
TCAAAGCACATGCTGAACAACATGTGACTGATAAAATGGTGCAAAATGCT
CAATACATCTTCCCACACAACACACCTTTGACTAAAGAAGCCTACTACTA
CAGAATGATTTTCGAGAGGTTCTTTCCACAGAATTCAGCCAGGCTAACTG
TCCCAGGAGGTGCGAGTGTAGCATGCAGCACGGNCTAAGCTGTCGAATGG
GATGC
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