FC924886
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924886 vs. ExPASy Swiss-Prot
Match: RS6_ASHGO (40S ribosomal protein S6 OS=Ashbya gossypii GN=RPS6 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.650e-51 Identity = 104/193 (53.89%), Postives = 132/193 (68.39%), Query Frame = 3 Query: 30 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKR 608 MK NI+ P G QK +E+DD+ ++R F+DKRI QEV+G+A+G+EFKGYVFKI GG DKQGFPMKQGVL P RV+LL+ +GT C+ IV PDL+VL L+I KKG+ ++ G+T+ P+ GPKRA+ IRK F L+K+DDVR +V R K K +KAPKIQRLVTP LQRKR Sbjct: 1 MKLNISYPVNGTQKTIEVDDEHRVRVFYDKRIGQEVNGEAVGDEFKGYVFKIAGGNDKQGFPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGDQEIEGITNESVPKRLGPKRANNIRKFFGLTKDDDVRDFV---IRREVVKGDKTYTKAPKIQRLVTPQRLQRKR 188
BLAST of FC924886 vs. ExPASy Swiss-Prot
Match: RS6_DICDI (40S ribosomal protein S6 OS=Dictyostelium discoideum GN=rps6 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 8.208e-48 Identity = 104/194 (53.61%), Postives = 125/194 (64.43%), Query Frame = 3 Query: 30 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRA 611 MK NIA P G QKK+ I+D K+R F +KRI QEV LG+EFKGYVFKI GG D +GFPM QGV P RVRLLL + CF CIV+ D++ L L+IVKKG+ ++PGLTD P +GPKRAS IRKLF LSK++DVR +V R T K SKAPKIQRLVTP T+ R++A Sbjct: 1 MKLNIAYPVNGSQKKINIEDKNKVRCFMEKRIGQEVEATTLGDEFKGYVFKITGGNDTEGFPMMQGVGAPTRVRLLLDGRSGCF--KPSRDGERKRKSVRGCIVAEDIASLQLIIVKKGDAEIPGLTDVSFPASKGPKRASNIRKLFKLSKDEDVRSFV-IRRELPATDKRKAKSKAPKIQRLVTPTTVARRKA 191
BLAST of FC924886 vs. ExPASy Swiss-Prot
Match: RS6_LEIMA (40S ribosomal protein S6 OS=Leishmania major GN=RPS6 PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.188e-38 Identity = 91/194 (46.91%), Postives = 114/194 (58.76%), Query Frame = 3 Query: 30 MKFNIANPTTGCQKKLEIDDDQKLRAFF-DKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVS-KAPKIQRLVTPLTLQRK 605 MK NIA P G K+ EI D+ R D R+ EV G G EFKGY+F++ GG DK GFPM GVL RV LL+ RG F C+++ D++++N+ I K G+ + G+TDT PR GPKRASKIRKLFNLS+ +DVRKYV R K+GKK KAPKIQRL+TP R+ Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRR---VVKSGKKDRLKAPKIQRLITPRVKARR 191
BLAST of FC924886 vs. ExPASy Swiss-Prot
Match: RS6_LEIIN (40S ribosomal protein S6 OS=Leishmania infantum GN=RPS6 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38 Identity = 90/194 (46.39%), Postives = 113/194 (58.25%), Query Frame = 3 Query: 30 MKFNIANPTTGCQKKLEIDDDQKLRAFF-DKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVS-KAPKIQRLVTPLTLQRK 605 M NIA P G K+ EI D+ R D R+ EV G G EFKGY+F++ GG DK GFPM GVL RV LL+ RG F C+++ D++++N+ I K G+ + G+TDT PR GPKRASKIRKLFNLS+ +DVRKYV R K+GKK KAPKIQRL+TP R+ Sbjct: 1 MYLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRR---VVKSGKKDRLKAPKIQRLITPRVKARR 191
BLAST of FC924886 vs. ExPASy Swiss-Prot
Match: RS6_ENCCU (40S ribosomal protein S6 OS=Encephalitozoon cuniculi GN=RPS6 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17 Identity = 58/165 (35.15%), Postives = 84/165 (50.91%), Query Frame = 3 Query: 78 EIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQ 572 EI+ ++R +DK+I + G LGEEF+G + +I GG D QGFPM G LT RVR LL +G + IVS ++ VLNL+I++ GE ++ GLT+ P++ K+RK+F + E+ K V Y R K PKI+ Sbjct: 3 EIERRNEVR-LYDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPLLSKGDAGY--RCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKMFGVPDEE---KNVVGYIRNILKSECDDPKKIPKIR 161 The following BLAST results are available for this feature:
BLAST of FC924886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC924886 ID=FC924886; Name=FC924886; organism=Citrus clementina; type=EST; length=684bpback to top |