FC924887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS_SYNFM (Formate--tetrahydrofolate ligase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=fhs PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.438e-17 Identity = 51/119 (42.86%), Postives = 67/119 (56.30%), Query Frame = 3 Query: 207 LSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKAL 563 L +++ L+ DG Y+ V ITPTPLGEGKSTT+VGL + LG V CLRQPS GPT IK + +IPM EF++ LTGDI+ R+ HE + +D+ L Sbjct: 50 LKIMNRLKDKPDGKYIEVTAITPTPLGEGKSTTSVGLMEGLGK-RGVNVGGCLRQPSGGPTMNIKGTAAGGGNALLIPMTEFSMGLTGDINDIMNAHNLAMVALTARMQHERNYTDEQL 167
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS_THEAC (Formate--tetrahydrofolate ligase OS=Thermoplasma acidophilum GN=fhs PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.878e-17 Identity = 51/115 (44.35%), Postives = 68/115 (59.13%), Query Frame = 3 Query: 129 ISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGD 473 I EI +E+ L + Y+LYG+Y AK+ L + + G ++V +TPTP GEGK+TTT+GL QA+ L K V +R+PS GP FGIK S+V P D NL TGD Sbjct: 4 IEEIIKEIGLGRDDYELYGRYMAKLDLGLQNR--GRPRAKLILVTAMTPTPAGEGKTTTTIGLGQAMKK-LGKNVAIAIREPSLGPCFGIKGGATGGGKSKVEPSDRINLFFTGD 115
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS_CORDI (Formate--tetrahydrofolate ligase OS=Corynebacterium diphtheriae GN=fhs PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.878e-17 Identity = 50/132 (37.88%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 84 VPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIH 479 +P D++IA + I++IA + + YG KAK+ ++ + G V+V GI+PTP GEGKST +GL A+ +V +R+PS GP GIK YSQ++PM++ NLH TGD H Sbjct: 1 MPTDVEIAQAHTLEPITDIANRAGVPSDALIPYGFTKAKI---DINRIASENTGKLVLVTGISPTPAGEGKSTVLIGLSDAMRLRGHNSIVA-IREPSLGPVMGIKGGAAGGGYSQIVPMEDINLHFTGDFH 128
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS_HALMA (Formate--tetrahydrofolate ligase OS=Haloarcula marismortui GN=fhs PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.203e-17 Identity = 48/120 (40.00%), Postives = 70/120 (58.33%), Query Frame = 3 Query: 129 ISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGY---YVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIH 479 I E+ + L + +G+Y AKV ++ L A+ V+V G+TPTP GEGK+ TTVGL Q L + ++ + +R+PS GP FG+K SQV+PM++ NLH TGD+H Sbjct: 4 IWELVEPWGLGLDDLQYFGEYTAKVKQHAIERLREQAENREQNLVLVTGMTPTPKGEGKTVTTVGLGQTLN-HVGEEAMIAIREPSLGPVFGVKGGAAGGGRSQVLPMEDINLHFTGDLH 122
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS_THET2 (Formate--tetrahydrofolate ligase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=fhs PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.184e-17 Identity = 53/119 (44.54%), Postives = 65/119 (54.62%), Query Frame = 3 Query: 123 LHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIH 479 L I E+A +L L + LYG + AKVL A G V+V ITPTP GEGK+TT +GL AL L K+ LR+PS GP FG+K ++V P E NLH TGD H Sbjct: 8 LPIEEVAAKLGLDRDRLYLYGPHMAKVLGE-----PPKAKGKLVLVTAITPTPAGEGKTTTAIGLVDALWR-LGKRAALALREPSLGPVFGVKGGATGGGKARVEPRHEINLHFTGDFH 120
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS_THEVO (Formate--tetrahydrofolate ligase OS=Thermoplasma volcanium GN=fhs PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.076e-16 Identity = 50/115 (43.48%), Postives = 67/115 (58.26%), Query Frame = 3 Query: 129 ISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGD 473 I EI E+ L + Y+LYG+Y AK+ L++ + + A ++V +TPT GEGK+TTT+GL QA L K V +R+PS GP FGIK S+V P D NL TGD Sbjct: 4 IEEILHEMGLSKDDYELYGRYMAKLSLNLQEVNKKKAK--LILVTAMTPTAAGEGKTTTTIGLGQAFKK-LGKNVAIAIREPSLGPCFGIKGGATGGGKSKVEPSDRINLLFTGD 115
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS_MYXXD (Formate--tetrahydrofolate ligase OS=Myxococcus xanthus (strain DK 1622) GN=fhs PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.139e-14 Identity = 44/117 (37.61%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 129 ISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIH 479 ++++ EL L P +G ++AKV L L + G G V+V I PTP GEGK+T +V L L ++ V LR+PS GP FG+K + + P + NLH TGD+H Sbjct: 6 MTDVGAELGLSPEDVLPWGTHRAKVSLDALGK-RGGRQGRLVLVSAINPTPPGEGKTTMSVALAMGLRK-RGRRAVAALREPSLGPVFGVKGGGTGGGQASLEPAADINLHFTGDLH 120
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS_UREPA (Formate--tetrahydrofolate ligase OS=Ureaplasma parvum GN=fhs PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.315e-14 Identity = 56/184 (30.43%), Postives = 80/184 (43.48%), Query Frame = 3 Query: 129 ISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEAS---QSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDL 671 I E+ + L + Y+LYG AK+ + +L D +V+ + P P GEGK+TT +GL AL K + LR+PS GP FG+K S + P D+ NLH +GD H I + +S S K L R N R+ + + K G + T DL Sbjct: 5 IEEMINKKGLLIDDYELYGNEIAKI--KSIKKLN-KKDSKLIVITSMNPNPAGEGKTTTAIGLVDALNKH-GYKAIGALREPSMGPVFGMKGTGSGGGLSFLKPFDKINLHFSGDFHAITAANNLIVAVIENEIHNRSSMQIDSQKILIKRCLDVNDRSLRNIEYDINHQQTKSGFNITAASDL 184
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS_ACHLI (Formate--tetrahydrofolate ligase OS=Acholeplasma laidlawii (strain PG-8A) GN=fhs PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.149e-13 Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 3 Query: 138 IAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIH 479 + EL++ + YGK K K+ LS+ + L+ A G ++V I PT GEGK+T ++GL Q K V+ LR+PS GP FG+K S + P + +LH GDIH Sbjct: 7 LIDELHILDDEIISYGKDKFKIELSLQERLKDKAPGKLILVTSINPTSSGEGKTTLSIGLAQGFKK-NGKDVMLALREPSMGPVFGMKGGATGGGVSILEPSLDIDLHFNGDIH 119 The following BLAST results are available for this feature:
BLAST of FC924887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 309
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924887 ID=FC924887; Name=FC924887; organism=Citrus clementina; type=EST; length=778bpback to top |