FC924887

Overview
NameFC924887
Unique NameFC924887
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length778
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4326 contig Ccv1_Contig4326:257..1034. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS2_STRPC (Formate--tetrahydrofolate ligase 2 OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=fhs2 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.061e-28
Identity = 81/230 (35.22%), Postives = 110/230 (47.83%), Query Frame = 3 
Query:   84 VPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRKVMDVNDRFLRKI 773
            V +DI+IANSV    IS++A +L +      LYGKYKAK+    L  L+   DG  ++V  I+PTP GEGK+TT+VGL  AL A + KK V  LR+PS GP FG+K       ++QV+PM++ NLH TGD H                                                     +G++      L    I+    L ID   ITW++V+D+NDR LR I
Sbjct:    2 VLSDIEIANSVTMEPISKVADQLGIDKEALCLYGKYKAKIDARQLVALKNKPDGKLILVTAISPTPAGEGKTTTSVGLVDALSA-IGKKAVIALREPSLGPVFGVKGGAAGGGHAQVVPMEDINLHFTGDFH----------------------------------------------------AIGVANNLLAALIDNHIHHGNSLGIDSRRITWKRVVDMNDRQLRHI 178
[Close]
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS2_STRPB (Formate--tetrahydrofolate ligase 2 OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=fhs2 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.061e-28
Identity = 81/230 (35.22%), Postives = 110/230 (47.83%), Query Frame = 3 
Query:   84 VPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRKVMDVNDRFLRKI 773
            V +DI+IANSV    IS++A +L +      LYGKYKAK+    L  L+   DG  ++V  I+PTP GEGK+TT+VGL  AL A + KK V  LR+PS GP FG+K       ++QV+PM++ NLH TGD H                                                     +G++      L    I+    L ID   ITW++V+D+NDR LR I
Sbjct:    2 VLSDIEIANSVTMEPISKVADQLGIDKEALCLYGKYKAKIDARQLVALKNKPDGKLILVTAISPTPAGEGKTTTSVGLVDALSA-IGKKAVIALREPSLGPVFGVKGGAAGGGHAQVVPMEDINLHFTGDFH----------------------------------------------------AIGVANNLLAALIDNHIHHGNSLGIDSRRITWKRVVDMNDRQLRHI 178
[Close]
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS2_STRP1 (Formate--tetrahydrofolate ligase 2 OS=Streptococcus pyogenes serotype M1 GN=fhs2 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.061e-28
Identity = 81/230 (35.22%), Postives = 110/230 (47.83%), Query Frame = 3 
Query:   84 VPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRKVMDVNDRFLRKI 773
            V +DI+IANSV    IS++A +L +      LYGKYKAK+    L  L+   DG  ++V  I+PTP GEGK+TT+VGL  AL A + KK V  LR+PS GP FG+K       ++QV+PM++ NLH TGD H                                                     +G++      L    I+    L ID   ITW++V+D+NDR LR I
Sbjct:    2 VLSDIEIANSVTMEPISKVADQLGIDKEALCLYGKYKAKIDARQLVALKNKPDGKLILVTAISPTPAGEGKTTTSVGLVDALSA-IGKKAVIALREPSLGPVFGVKGGAAGGGHAQVVPMEDINLHFTGDFH----------------------------------------------------AIGVANNLLAALIDNHIHHGNSLGIDSRRITWKRVVDMNDRQLRHI 178
[Close]
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS2_DESHY (Formate--tetrahydrofolate ligase 2 OS=Desulfitobacterium hafniense (strain Y51) GN=fhs2 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.061e-28
Identity = 63/130 (48.46%), Postives = 87/130 (66.92%), Query Frame = 3 
Query:   90 ADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIH 479
            +DI+IA     L ++E+A++LN+   + + YGKYKAK+  ++L E   + DG  ++V  I PTP GEGK+TTTVGL  AL   L KKVV  LR+PS GP FG+K       Y+QV+PM++ NLH TGD+H
Sbjct:    5 SDIEIAQESTMLPVAELAEKLNIAEEYVESYGKYKAKIDYNLLKEKGNTPDGKLILVTAINPTPAGEGKTTTTVGLGDAL-THLGKKVVIALREPSLGPVFGVKGGAAGGGYAQVVPMEDINLHFTGDLH 133
[Close]
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS_SACEN (Formate--tetrahydrofolate ligase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=fhs PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.386e-28
Identity = 67/132 (50.76%), Postives = 84/132 (63.64%), Query Frame = 3 
Query:   84 VPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIH 479
            VP+D+DI+ +     + +IA +L L P+  + YG   AK+ L  ++EL       YVVV  ITPTPLGEGK+TTTVGL QAL   L K     +RQPS GPTFGIK       YSQV+PM+  NLHLTGD+H
Sbjct:    3 VPSDLDISRATALRPLEDIAAQLGLGPHLLEPYGHNVAKISLDAIEELSDRPQARYVVVSAITPTPLGEGKTTTTVGLGQAL-RHLGKVSAVAVRQPSMGPTFGIKGGAAGGGYSQVVPMEALNLHLTGDMH 133
[Close]
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS_HALOH (Formate--tetrahydrofolate ligase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=fhs PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.386e-28
Identity = 68/130 (52.31%), Postives = 84/130 (64.62%), Query Frame = 3 
Query:   90 ADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIH 479
            +DI+IA       I EIA++  L  +  +LYGKYKAKV   ++D+     DG  V+V  ITPTP GEGK+TTTVGL QAL   L KK +  LR+PS GPT GIK       YSQV+PM++ NLH TGDIH
Sbjct:    3 SDIEIAQDARMEPIEEIAEKAGLHKDQIELYGKYKAKVNTDIIDD--DKKDGKLVLVTAITPTPAGEGKTTTTVGLGQALN-LLGKKAIIALREPSLGPTMGIKGGAAGGGYSQVLPMEDINLHFTGDIH 129
[Close]
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS_CLOBA (Formate--tetrahydrofolate ligase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=fhs PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.386e-28
Identity = 64/129 (49.61%), Postives = 82/129 (63.57%), Query Frame = 3 
Query:   93 DIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIH 479
            DI+IA   E LHI  IA++L L     + YGKYK K+ L V ++++ + DG  V+V  I PTP GEGKST TVGL  AL   + K  V  LR+PS GP FGIK       Y+QV+PM++ NLH TGD+H
Sbjct:    4 DIEIAQEAEMLHIRNIAEKLGLDEEDIEYYGKYKCKISLDVYNKVKNNRDGKLVLVTAINPTPAGEGKSTVTVGLGDALNK-MGKNTVIALREPSLGPVFGIKGGAAGGGYAQVVPMEDINLHFTGDMH 131
[Close]
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS2_STRPM (Formate--tetrahydrofolate ligase 2 OS=Streptococcus pyogenes serotype M28 GN=fhs2 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.386e-28
Identity = 81/230 (35.22%), Postives = 110/230 (47.83%), Query Frame = 3 
Query:   84 VPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRKVMDVNDRFLRKI 773
            V +DI+IANSV    IS++A +L +      LYGKYKAK+    L  L+   DG  ++V  I+PTP GEGK+TT+VGL  AL A + KK V  LR+PS GP FG+K       ++QV+PM++ NLH TGD H                                                     +G++      L    I+    L ID   ITW++V+D+NDR LR I
Sbjct:    2 VLSDIEIANSVTMEPISKVANQLGIDEEALCLYGKYKAKIDARQLVALKDKPDGKLILVTAISPTPAGEGKTTTSVGLVDALSA-IGKKAVIALREPSLGPVFGVKGGAAGGGHAQVVPMEDINLHFTGDFH----------------------------------------------------AIGVANNLLAALIDNHIHHGNSLGIDSRRITWKRVVDMNDRQLRHI 178
[Close]
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS2_STRPG (Formate--tetrahydrofolate ligase 2 OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=fhs2 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.386e-28
Identity = 81/230 (35.22%), Postives = 110/230 (47.83%), Query Frame = 3 
Query:   84 VPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRKVMDVNDRFLRKI 773
            V +DI+IANSV    IS++A +L +      LYGKYKAK+    L  L+   DG  ++V  I+PTP GEGK+TT+VGL  AL A + KK V  LR+PS GP FG+K       ++QV+PM++ NLH TGD H                                                     +G++      L    I+    L ID   ITW++V+D+NDR LR I
Sbjct:    2 VLSDIEIANSVTMEPISKVADQLGIDKEALCLYGKYKAKIDARQLVALKDKPDGKLILVTAISPTPAGEGKTTTSVGLVDALSA-IGKKAVIALREPSLGPVFGVKGGAAGGGHAQVVPMEDINLHFTGDFH----------------------------------------------------AIGVANNLLAALIDNHIHHGNSLGIDSRRITWKRVVDMNDRQLRHI 178
[Close]
BLAST of FC924887 vs. ExPASy Swiss-Prot
Match: FTHS2_STRPD (Formate--tetrahydrofolate ligase 2 OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=fhs2 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.386e-28
Identity = 81/230 (35.22%), Postives = 110/230 (47.83%), Query Frame = 3 
Query:   84 VPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRKVMDVNDRFLRKI 773
            V +DI+IANSV    IS++A +L +      LYGKYKAK+    L  L+   DG  ++V  I+PTP GEGK+TT+VGL  AL A + KK V  LR+PS GP FG+K       ++QV+PM++ NLH TGD H                                                     +G++      L    I+    L ID   ITW++V+D+NDR LR I
Sbjct:    2 VLSDIEIANSVSMEPISKVADQLGIDKEALCLYGKYKAKINARQLVALKDKPDGKLILVTTISPTPAGEGKTTTSVGLVDALSA-IGKKAVIALREPSLGPVFGVKGGAAGGGHAQVVPMEDINLHFTGDFH----------------------------------------------------AIGVANNLLAALIDNHIHHGNSLGIDSRRITWKRVVDMNDRQLRHI 178
The following BLAST results are available for this feature:
BLAST of FC924887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 309
Match NameE-valueIdentityDescription
FTHS2_STRPC1.061e-2835.22Formate--tetrahydrofolate ligase 2 OS=Streptococcu... [more]
FTHS2_STRPB1.061e-2835.22Formate--tetrahydrofolate ligase 2 OS=Streptococcu... [more]
FTHS2_STRP11.061e-2835.22Formate--tetrahydrofolate ligase 2 OS=Streptococcu... [more]
FTHS2_DESHY1.061e-2848.46Formate--tetrahydrofolate ligase 2 OS=Desulfitobac... [more]
FTHS_SACEN1.386e-2850.76Formate--tetrahydrofolate ligase OS=Saccharopolysp... [more]
FTHS_HALOH1.386e-2852.31Formate--tetrahydrofolate ligase OS=Halothermothri... [more]
FTHS_CLOBA1.386e-2849.61Formate--tetrahydrofolate ligase OS=Clostridium bo... [more]
FTHS2_STRPM1.386e-2835.22Formate--tetrahydrofolate ligase 2 OS=Streptococcu... [more]
FTHS2_STRPG1.386e-2835.22Formate--tetrahydrofolate ligase 2 OS=Streptococcu... [more]
FTHS2_STRPD1.386e-2835.22Formate--tetrahydrofolate ligase 2 OS=Streptococcu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YL04FM1 TF Citrus clementina cDNA clone KN0AAP1YL04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924887 ID=FC924887; Name=FC924887; organism=Citrus clementina; type=EST; length=778bp
CAAAACTAAAATTGATTTATAAAAAAAAAAAATAATTAATGGCTTCATCA
AAAACAGTGAGAAAATTACAGGTGGTATCACCAGTACCAGCAGATATAGA
CATTGCAAACTCAGTGGAGCCACTTCATATTTCTGAGATTGCCCAAGAAC
TCAACCTCAAGCCAAACCATTATGATCTCTATGGCAAATACAAAGCCAAG
GTGTTGCTATCTGTTCTTGACGAGCTTGAAGGATCTGCAGATGGGTATTA
TGTGGTGGTTGGAGGGATTACTCCAACTCCTCTTGGAGAGGGCAAGTCTA
CTACAACTGTTGGGCTGTGTCAAGCATTGGGTGCTTTTCTTGATAAAAAG
GTTGTTACATGTCTTCGTCAACCCTCACAAGGACCAACCTTTGGAATCAA
AGGAGGTGCAGCCGGTGGTGGTTACAGTCAAGTGATCCCAATGGATGAGT
TCAATCTTCATTTAACAGGAGATATTCATGCAATTACAGCTGCAAACAAT
CTTCTTGCTGCTGCCATTGACACCAGGATATTCCATGAGGCGAGCCAATC
CGATAAGGCTTTATTTAACAGGTTATGCCCACCGAACAAAGAAGGAGAAC
GGAGCTTTAGTAACATCATGTTTAGGCGTCTGAAGAAACTTGGTATCTCC
AAAACCAAGCCCGAGGATCTTACGCCAGAAGAAATTAACAGATTTGCTAG
GCTTGATATCGACCCAGCTTCTATTACATGGAGGAAAGTTATGGATGTGA
ATGACCGATTCTTGAGGAAAATTACTAT
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