FC924902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH601_RHOPB (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=groL1 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.546e-28 Identity = 75/196 (38.27%), Postives = 109/196 (55.61%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSV-VEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 MLG KKV + I G+G + IE R Q+ IE +TSDY+ + L+ERL L+ VA+++VGGAT E +EEGI+PGGGVALL ASE+L+++ N +K GV++++ A+ P IA AG SV V K+L ++ +D EY D VK I+D P K+++ + +A S Sbjct: 316 MLGKAKKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKERKDRVDDAMHATRAAVEEGILPGGGVALLRASEQLKRIKTQNDDQKTGVEIVRKALSWPARQIAINAGEDGSVIVGKILEKDQYSYGFDSQSGEYGDMVKKGIID-PTKVVRAAIQNAAS 510 HSP 2 Score: 22.3274 bits (46), Expect = 1.546e-28 Identity = 9/12 (75.00%), Postives = 12/12 (100.00%), Query Frame = 2 Query: 89 KAIMRDIAILTG 124 KA+++DIAILTG Sbjct: 286 KAMLQDIAILTG 297
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH601_RHORT (60 kDa chaperonin 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=groL1 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.546e-28 Identity = 73/196 (37.24%), Postives = 111/196 (56.63%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSVVE-KLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 MLG+ K V +T + I G+G + I+ RC Q+ IE +TSDY+ + L+ERL LS VA+++VGGA+ E +EEGII GGGVALLHA++ L+ L N +K+G+++++ A++ P+ IA AG +VV KLL + D Y+ Y + VK ++D P K+++ L A S Sbjct: 316 MLGTAKTVTITKDNTTIVDGAGVKADIDARCAQIRATIEDTTSDYDREKLQERLAKLSGGVAVIRVGGASEVEVKEKKDRVDDAMHATRAAVEEGIIAGGGVALLHAAKALDALSPANADQKVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLESSDADFGYNAQTGVYENLVKVGVID-PTKVVRTALQGAAS 510 HSP 2 Score: 21.9422 bits (45), Expect = 1.546e-28 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 89 KAIMRDIAILTG 124 KA++ DIAILTG Sbjct: 286 KAMLEDIAILTG 297
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_ZYMMO (60 kDa chaperonin OS=Zymomonas mobilis GN=groL PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.716e-28 Identity = 70/196 (35.71%), Postives = 114/196 (58.16%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSVVE-KLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 MLGS K+V +T I G+G+Q I+DR E + IE +TSDY+ + L+ER+ L+ VA++KVGGAT E ++EGI+PGGG ALL+A++ LE L +N ++ G+ +++ A++ P+ IA AGF +VV KL+ + + ++ ++Y D + ++D P K+++ L DA S Sbjct: 316 MLGSAKRVSITKENTTIVDGAGDQSTIKDRVEAIRSQIEATTSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVQEGIVPGGGTALLYATKTLEGLNGVNEDQQRGIDIVRRALQAPVRQIAQNAGFDGAVVAGKLIDGNDDKIGFNAQTEKYEDLAATGVID-PTKVVRTALQDAAS 510
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_TRYCR (Chaperonin HSP60, mitochondrial OS=Trypanosoma cruzi GN=HSP60 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.716e-28 Identity = 71/201 (35.32%), Postives = 117/201 (58.21%), Query Frame = 3 Query: 156 PLMLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKL---PAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQ-VSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 P +LG+ KK +T ++ ++ G G +++R E L I+ TSDY + L+ERL LS VA++KVGG + E ++EGI+PGGGVALL AS+ L+ L ++ ++ GV+++++AV++P +TI AG + VVEK+L + + YD RD YV+ ++ I+D P ++++ + DAVS Sbjct: 324 PAILGTVKKATITKDDTVLLNGGGESSMVKERVELLRGLIDGETSDYNREKLQERLAKLSGGVAVIKVGGGSEVEVNEKKDRITDALCSTRAAVQEGIVPGGGVALLRASKALDSLLGDSSLTADQRTGVQIIRNAVRLPAHTIVLNAGKEGAVVVEKVLENNDVTVGYDAQRDRYVNMFEAGIID-PARVVRVAITDAVS 523
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_RHOCS (60 kDa chaperonin OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=groL PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.716e-28 Identity = 75/196 (38.27%), Postives = 114/196 (58.16%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSV-VEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 MLG KKV +T + I G+G++ I+ R Q+ IE +TSDY+ + L+ERL L+ VA+++VGGAT E +EEGI+ GGGVALL+A++ L+KL A+N +K G+ +++ A++ P+ IA AGF SV V KLL + + ++ EY D K ++D P K+++ L DA S Sbjct: 316 MLGQAKKVVITKDNTTIVDGAGSKEDIQARIVQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIVAGGGVALLYATKALDKLTAVNEDQKFGIDIVRKALQAPVRQIAQNAGFDGSVIVGKLLEKGETNFGFNAQAGEYGDMFKFGVID-PTKVVRAALQDAAS 510
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_RICCN (60 kDa chaperonin OS=Rickettsia conorii GN=groL PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.012e-28 Identity = 74/195 (37.95%), Postives = 111/195 (56.92%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LG+ K+V ++ +I G+G++ IEDR Q+ I +TSDY+ + L+ERL LS VA+LKVGGAT E +EEG++ GGGV LLHAS+ L KL N ++ G++++ A+K PL I AG VV KLL ++ + ++ +YVD +K+ I+D P K+++ L DA S Sbjct: 317 LGTAKRVTISKENTVIVDGNGDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQPLTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFNAQDMQYVDMIKAGIID-PAKVVRTALQDAAS 510 HSP 2 Score: 20.7866 bits (42), Expect = 2.012e-28 Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 89 KAIMRDIAILT 121 KA+M DIAILT Sbjct: 286 KAMMEDIAILT 296
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_RICRS (60 kDa chaperonin OS=Rickettsia rickettsii (strain Sheila Smith) GN=groL PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.012e-28 Identity = 74/195 (37.95%), Postives = 111/195 (56.92%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LG+ K+V ++ +I G+G++ IEDR Q+ I +TSDY+ + L+ERL LS VA+LKVGGAT E +EEG++ GGGV LLHAS+ L KL N ++ G++++ A+K PL I AG VV KLL ++ + ++ +YVD +K+ I+D P K+++ L DA S Sbjct: 317 LGTAKRVTISKENTVIVDGNGDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQPLTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFNAQDMQYVDMIKAGIID-PAKVVRTALQDAAS 510 HSP 2 Score: 20.7866 bits (42), Expect = 2.012e-28 Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 89 KAIMRDIAILT 121 KA+M DIAILT Sbjct: 286 KAMMEDIAILT 296
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_RICRO (60 kDa chaperonin OS=Rickettsia rickettsii (strain Iowa) GN=groL PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.012e-28 Identity = 74/195 (37.95%), Postives = 111/195 (56.92%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LG+ K+V ++ +I G+G++ IEDR Q+ I +TSDY+ + L+ERL LS VA+LKVGGAT E +EEG++ GGGV LLHAS+ L KL N ++ G++++ A+K PL I AG VV KLL ++ + ++ +YVD +K+ I+D P K+++ L DA S Sbjct: 317 LGTAKRVTISKENTVIVDGNGDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQPLTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFNAQDMQYVDMIKAGIID-PAKVVRTALQDAAS 510 HSP 2 Score: 20.7866 bits (42), Expect = 2.012e-28 Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 89 KAIMRDIAILT 121 KA+M DIAILT Sbjct: 286 KAMMEDIAILT 296
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_RICPU (60 kDa chaperonin OS=Rickettsia peacockii (strain Rustic) GN=groL PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.012e-28 Identity = 74/195 (37.95%), Postives = 111/195 (56.92%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LG+ K+V ++ +I G+G++ IEDR Q+ I +TSDY+ + L+ERL LS VA+LKVGGAT E +EEG++ GGGV LLHAS+ L KL N ++ G++++ A+K PL I AG VV KLL ++ + ++ +YVD +K+ I+D P K+++ L DA S Sbjct: 317 LGTAKRVTISKENTVIVDGNGDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQPLTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFNAQDMQYVDMIKAGIID-PAKVVRTALQDAAS 510 HSP 2 Score: 20.7866 bits (42), Expect = 2.012e-28 Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 89 KAIMRDIAILT 121 KA+M DIAILT Sbjct: 286 KAMMEDIAILT 296
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_RICM5 (60 kDa chaperonin OS=Rickettsia massiliae (strain Mtu5) GN=groL PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.012e-28 Identity = 74/195 (37.95%), Postives = 111/195 (56.92%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LG+ K+V ++ +I G+G++ IEDR Q+ I +TSDY+ + L+ERL LS VA+LKVGGAT E +EEG++ GGGV LLHAS+ L KL N ++ G++++ A+K PL I AG VV KLL ++ + ++ +YVD +K+ I+D P K+++ L DA S Sbjct: 317 LGTAKRVTISKENTVIVDGNGDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQPLTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFNAQDMQYVDMIKAGIID-PAKVVRTALQDAAS 510 HSP 2 Score: 20.7866 bits (42), Expect = 2.012e-28 Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 89 KAIMRDIAILT 121 KA+M DIAILT Sbjct: 286 KAMMEDIAILT 296 The following BLAST results are available for this feature:
BLAST of FC924902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924902 ID=FC924902; Name=FC924902; organism=Citrus clementina; type=EST; length=750bpback to top |