FC924903
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924903 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 5.608e-33 Identity = 69/142 (48.59%), Postives = 93/142 (65.49%), Query Frame = 3 Query: 3 PGAYEGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 428 PG GFNV+ VS KD+KRG V + D+P A FT+Q++++ HP I GY PV HT+ +A F E+L K+D R+G+ +E+ P+FLK GDA VK+ PTKPMV+E E P LGRFA+RDM T+A G+ V K+ Sbjct: 287 PGDNIGFNVRGVSKKDIKRGDVCGHP-DNPPTVAEEFTAQIVVLQHPTAITVGYTPVFHAHTAQVACTFIELLKKLDPRTGQVIEENPQFLKTGDAAIVKIKPTKPMVIENVREIPQLGRFAIRDMGMTIAAGMAIDVKAKN 427
BLAST of FC924903 vs. ExPASy Swiss-Prot
Match: EF1A_SULTO (Elongation factor 1-alpha OS=Sulfolobus tokodaii GN=tuf PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 7.324e-33 Identity = 71/141 (50.35%), Postives = 96/141 (68.09%), Query Frame = 3 Query: 3 PGAYEGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 425 PG GFNV+ V KD+KRG VA S + P A FT+Q+I++ HP + GY PV+ HT+ +A + E+ +KID ++GKE+EK P+FLK+GD+ VKM P K +VVE F E+P LGRFA+RDM +TV VGV+ V K Sbjct: 291 PGDNIGFNVRGVEKKDIKRGDVAG-SLNVPPTVADEFTAQIIVIWHPTAVSVGYTPVVHIHTASVACRITELTSKIDPKTGKEVEKNPQFLKSGDSAIVKMKPIKELVVEKFREFPALGRFAMRDMGKTVGVGVVIDVKPK 430
BLAST of FC924903 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.249e-32 Identity = 66/144 (45.83%), Postives = 95/144 (65.97%), Query Frame = 3 Query: 3 PGAYEGFNVKNVSVKDLKRGYVASNSKDDPA--KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 428 PG GFNV+ V D+KRG VA ++ + P + F +Q+I++NHP I GY PVL HT +AV+F ++L K+D R+G +E+ P+F+K GD+ V + PTKPMV+E E P +GRFA+RDM QTVA G++ S+ K + Sbjct: 285 PGDNIGFNVRGVGKNDIKRGDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITIGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428
BLAST of FC924903 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.632e-32 Identity = 66/144 (45.83%), Postives = 95/144 (65.97%), Query Frame = 3 Query: 3 PGAYEGFNVKNVSVKDLKRGYVASNSKDDPA--KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 428 PG GFNV+ V D+KRG VA ++ + P + F +Q+I++NHP I GY PVL HT +AV+F ++L K+D R+G +E+ P+F+K GD+ V + PTKPMV+E E P +GRFA+RDM QTVA G++ S+ K + Sbjct: 285 PGDNIGFNVRGVGKNDIKRGDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428
BLAST of FC924903 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.632e-32 Identity = 69/142 (48.59%), Postives = 95/142 (66.90%), Query Frame = 3 Query: 3 PGAYEGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 428 PG GFNV+ V KD+KRG V ++ + P A++FT+Q++++ HP + +GY PV HT+ IA FAEI K++ +G+ LE+ P FLK GDA VK+IPTKPMV+E+ E P LGRFA+RDM TVA G+ V K+ Sbjct: 287 PGDNIGFNVRGVGKKDIKRGDVLGHTTNPPTV-ATDFTAQIVVLQHPSVLTDGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of FC924903 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.635e-32 Identity = 71/138 (51.45%), Postives = 94/138 (68.12%), Query Frame = 3 Query: 3 PGAYEGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 416 PG GFNV+ V KD+KRG VA + ++ P A FT+QVI++ HP +G GY PVL HT+ IA + +EI ++ID ++GKE EK P+F+K GD+ VK P K +V E F E+P LGRFA+RDM +TV VGVI V Sbjct: 291 PGDNIGFNVRGVEKKDVKRGDVAGSVQNPPTV-ADEFTAQVIVIWHPTAVGVGYTPVLHVHTASIACRVSEITSRIDPKTGKEAEKNPQFIKAGDSAIVKFKPIKELVAEKFREFPALGRFAMRDMGKTVGVGVIIDV 427
BLAST of FC924903 vs. ExPASy Swiss-Prot
Match: EF1A_PYRKO (Elongation factor 1-alpha OS=Pyrococcus kodakaraensis GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.635e-32 Identity = 66/144 (45.83%), Postives = 95/144 (65.97%), Query Frame = 3 Query: 3 PGAYEGFNVKNVSVKDLKRGYVASNSKDDPA--KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 428 PG GFNV+ V D+KRG VA ++ + P + F +Q+I++NHP I GY PVL HT+ +AV+F ++L K+D R+G +E+ P+F+K GD+ V + PTK MV+E E P +GRFA+RDM QTVA G++ S+ K D Sbjct: 285 PGDNIGFNVRGVGKNDIKRGDVAGHTTNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAD 428
BLAST of FC924903 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.635e-32 Identity = 66/138 (47.83%), Postives = 93/138 (67.39%), Query Frame = 3 Query: 3 PGAYEGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 416 PG GFNV+ +S KD++RG VA + D P A FT+++ ++ HP I GY PV+ HT+ IA + EI K+D R+G+ +EK P+FLK GDA VK P KPMV+E +SE+P LGRFA+RDM +T+ +G++ V Sbjct: 293 PGDNIGFNVRGISKKDIRRGDVAGHV-DKPPTVAEEFTARIFVIWHPSAITVGYTPVIHAHTASIAARITEIQAKLDPRTGQVIEKNPQFLKAGDAAIVKFKPIKPMVIEKYSEFPQLGRFAMRDMGKTIGIGIVVDV 429
BLAST of FC924903 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.747e-32 Identity = 69/142 (48.59%), Postives = 94/142 (66.20%), Query Frame = 3 Query: 3 PGAYEGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 428 PG GFNV+ V KD+KRG V ++ + P A++FT+Q++++ HP + GY PV HT+ IA FAEI K++ +G+ LE+ P FLK GDA VK+IPTKPMV+E+ E P LGRFA+RDM TVA G+ V K+ Sbjct: 287 PGDNIGFNVRGVGKKDIKRGDVLGHTTNPPTV-ATDFTAQIVVLQHPSVLTVGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of FC924903 vs. ExPASy Swiss-Prot
Match: EF1A_METS5 (Elongation factor 1-alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=tuf PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.747e-32 Identity = 66/138 (47.83%), Postives = 95/138 (68.84%), Query Frame = 3 Query: 3 PGAYEGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 416 PG GFNV+ + KD+KRG V ++ + P A FT++VI++ HP + GY PV+ HT+ IA + +EI+ ++D ++GKE EK P+F+K G++ VK P KP+ VE FS++PPLGRFA+RDM +TV VGVI V Sbjct: 291 PGDNIGFNVRGIDKKDVKRGDVVGHTTNPPTV-AEEFTARVIVVWHPTALAVGYTPVVHVHTASIACRVSEIVARLDPKTGKEAEKNPQFIKQGESAIVKFKPIKPLCVEKFSDFPPLGRFAMRDMGKTVGVGVINDV 427 The following BLAST results are available for this feature:
BLAST of FC924903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC924903 ID=FC924903; Name=FC924903; organism=Citrus clementina; type=EST; length=590bpback to top |