FC925033

Overview
NameFC925033
Unique NameFC925033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length655
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925033 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.240e-31
Identity = 70/154 (45.45%), Postives = 103/154 (66.88%), Query Frame = 2
Query:   71 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKA 532
            RE+ V LAKLAEQAERY++MVEFM+ L   +    +++ EER L SV +K  IG+ RA+WRI+ S+EQK      ++    +  Y+ KVE EL  VC  +L ++  + +P A + E+ VF+ KMKGDY+RY+AEF  G E+KAA + ++ +Y+A
Sbjct:    4 REKVVRLAKLAEQAERYDDMVEFMKTL---ARMDVDMSAEERLLFSVGFKKTIGARRASWRILESLEQKVTA--GDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQA 152          
BLAST of FC925033 vs. ExPASy Swiss-Prot
Match: 1433G_SHEEP (14-3-3 protein gamma (Fragments) OS=Ovis aries GN=YWHAG PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.652e-24
Identity = 62/148 (41.89%), Postives = 80/148 (54.05%), Query Frame = 2
Query:  179 LTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEI 622
            L+ EERNLLSVAYKNV+G+ R++WR++SSIEQK                                                  FYLKMKGDY+RY+AE   G++R    E + ++Y  A +I+   + PTHPIRLGLALN+SVFYYEI
Sbjct:   14 LSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTS------------------------------------------------FYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEI 113          
BLAST of FC925033 vs. ExPASy Swiss-Prot
Match: 14331_PSEMZ (14-3-3-like protein 1 (Fragments) OS=Pseudotsuga menziesii PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.785e-11
Identity = 56/154 (36.36%), Postives = 66/154 (42.86%), Query Frame = 2
Query:  119 YEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIR 580
            YEEMVEFM+K                NLLSVAYK           I+SSIEQKEE R                      +C  ILRLL+++LIPS+TA+ES                                   K+AQDIA A+LAPTHPIR
Sbjct:    1 YEEMVEFMEK----------------NLLSVAYK-----------IISSIEQKEESR----------------------ICEGILRLLDSHLIPSSTAAES-----------------------------------KSAQDIAAAELAPTHPIR 70          
The following BLAST results are available for this feature:
BLAST of FC925033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14338_ORYSJ2.240e-3145.45Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]
1433G_SHEEP2.652e-2441.8914-3-3 protein gamma (Fragments) OS=Ovis aries GN=... [more]
14331_PSEMZ9.785e-1136.3614-3-3-like protein 1 (Fragments) OS=Pseudotsuga m... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YB01FM1 TF Citrus clementina cDNA clone KN0AAP8YB01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925033 ID=FC925033; Name=FC925033; organism=Citrus clementina; type=EST; length=655bp
CTCTCTCTCTCTCATCACACTTTCAGAGCCTGTGAAAAAGATGGCGACAA
CAGTTCCGGACAACCTGACGAGAGAGCAGTACGTGTACTTAGCCAAGCTA
GCCGAGCAAGCCGAGCGTTACGAAGAGATGGTGGAGTTCATGCAGAAGCT
GGTTGTCGGCTCGACTCCAGCCGCCGAGCTGACGGTCGAGGAGCGAAACC
TCCTCTCAGTGGCCTACAAGAACGTAATCGGCTCACTCCGCGCCGCGTGG
CGCATCGTGTCGTCGATCGAGCAGAAGGAGGAGGGGAGGAAGAACGAGGA
ACACGTGTCGCTCGTGAAAGAGTACAGATCGAAGGTGGAGAAGGAGCTTT
CGGATGTGTGCGCGAGTATTTTGAGGTTGTTGGAAGCGAATTTGATTCCG
TCGGCTACGGCGAGTGAGTCCAAAGTGTTTTATTTGAAAATGAAGGGAGA
TTATCATCGTTACATGGCCGAGTTTAAGATTGGCGATGAGCGGAAAGCCG
CCGCTGAAGACACTATGCAATCTTACAAAGCTGCTCAGGATATTGCTGGG
GCTGATCTCGCGCCGACGCATCCGATAAGGCTGGGATTGGCTCTCAATTT
CTCGGTGTTTTACTACGAGATTCTCAATCAATCTGATAAGGCATGCAGCA
TGGCT
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