FC925043

Overview
NameFC925043
Unique NameFC925043
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.841e-16
Identity = 46/155 (29.68%), Postives = 78/155 (50.32%), Query Frame = 2
Query:  125 ISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF 589
            ++  PV+DM              K++ AC+ WGFF+LVNHG+ST  L+ ++K  +  +  +ME++ K       +E      V SE   LDW   F +  LP         P L    R+T++ +++EL+ LAE L+  + E L ++   +++ F
Sbjct:    1 MATFPVVDMDLINGEERAATLE-KINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTMEQRFKEMVAAKGLEA-----VQSEIHYLDWESTFFLRHLP--SSNISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAF 147          

HSP 2 Score: 34.2686 bits (77), Expect = 5.841e-16
Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP+P+ + GL  H+DA  + +L Q
Sbjct:  163 PPCPKPDLIKGLRAHTDAGGIILLFQ 188          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16
Identity = 59/208 (28.37%), Postives = 93/208 (44.71%), Query Frame = 2
Query:   65 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAK--LDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVH--LRKPHLFPKLPPSLRETLEVYS---MELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYPSLSSARE--GYGP 661
            +P ++I P+ +SP   D      +P+ID+                 +  AC+  GFFQ+VNHG+    L    + V+ FF + + EK++  + PG+  G+  +F      KL W +  S  + P    L   ++   L    R   EVY+    E+  L+  ++  +GE L +     R FFE     MR+NYYP      E  G GP
Sbjct:   17 IPSQFIWPEGESPT-PDAAEELHVPLIDIGGMLSGDPRATAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGP 223          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 58/208 (27.88%), Postives = 93/208 (44.71%), Query Frame = 2
Query:   65 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAK--LDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVH--LRKPHLFPKLPPSLRETLEVYS---MELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYPSLSSARE--GYGP 661
            +P ++I P+ +SP   D      +P+I++                 +  AC+  GFFQ+VNHG+    L    + V+ FF + + EK++  + PG+  G+  +F      KL W +  S  + P    L   ++   L    R   EVY+    E+  L+  ++  +GE L +     R FFE     MR+NYYP      E  G GP
Sbjct:   17 IPSQFIWPEGESPT-PDAAEELHVPLINIGGMLSGDAAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGP 223          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14
Identity = 53/206 (25.73%), Postives = 95/206 (46.12%), Query Frame = 2
Query:   65 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPG--DMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF--ENGVQAMRMNYYPSLSSAREGYGPVA 667
            +P  YIR + + P ++    ++ Q+PVID+               +  A +EWG FQ+VNHG+    + KL+K  + FF L  +EK+   +  G   +EG+G         K  W D    +  P      + +P  PP  RE  E Y++ L+ + + L   +   + ++  E+++    ++ +  +++NYYP         G VA
Sbjct:   19 IPSEYIRSESEQPAVTTMQGVVLQVPVIDLGSSNNTEENLVEL--IAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFELPQQEKEVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKASGGDDLIYMLKINYYPPCPRPDLALGVVA 222          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 2.290e-14
Identity = 43/151 (28.48%), Postives = 74/151 (49.01%), Query Frame = 2
Query:  137 PVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF 589
            PVIDM+             K+  AC+ WGFF+LVNHG+S   ++ +++  +  +N  ME++ K       +E      V SE   LDW   F +  LPV        P L    R+ ++ ++ +L+ LAE L+  + E + ++   +++ F
Sbjct:    5 PVIDMEKLNGEERAPTME-KIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKCMEQRFKEMVATKGLEA-----VQSEINDLDWESTFFLRHLPV--SNISEIPDLEQDHRKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAF 147          

HSP 2 Score: 35.4242 bits (80), Expect = 2.290e-14
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP+PE + GL  H+DA  + +L Q
Sbjct:  163 PPCPRPELIKGLRAHTDAGGIILLFQ 188          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.963e-14
Identity = 37/146 (25.34%), Postives = 62/146 (42.47%), Query Frame = 2
Query:  194 KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW-QHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYP 628
            K+  A ++WGFFQ++NHG+    LEK+   +  F     E KK ++ + P     +   F +      +W D     T P     P     LP +  E +  YS E+  L + L   + E L +    +++        +  +YYP
Sbjct:   83 KIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYTAP----DPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYP 224          

HSP 2 Score: 40.4318 bits (93), Expect = 2.963e-14
Identity = 17/26 (65.38%), Postives = 20/26 (76.92%), Query Frame = 3
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCPQP+  +GL+ HSD   LTILLQ
Sbjct:  224 PPCPQPDLTLGLTKHSDNSFLTILLQ 249          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.871e-14
Identity = 53/174 (30.46%), Postives = 80/174 (45.98%), Query Frame = 2
Query:  134 IPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSME--EKKKYWQHPGDM--EGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQ-----AMRMNYYP 628
            IPVID              A++   C+EWGFFQLVNHG+    LE++KK     + L  E  E  K  Q    +  EG GQ         +DW D+F        L+  + +P  PP   ET++ Y  E++ LAE ++  M E L  +   +++ F    Q       ++++YP
Sbjct:    3 IPVIDFSKLDGKERAETM-ARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECYKLREERFEGSKPVQLLDTLVKEGDGQRL-----DNVDWEDVFV-------LQDDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYP 163          

HSP 2 Score: 30.4166 bits (67), Expect = 3.871e-14
Identity = 12/26 (46.15%), Postives = 17/26 (65.38%), Query Frame = 3
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP+ + V GL  H+DA  + +L Q
Sbjct:  163 PPCPRLDLVKGLRAHTDAGGVILLFQ 188          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 8.473e-14
Identity = 42/154 (27.27%), Postives = 76/154 (49.35%), Query Frame = 2
Query:  128 SQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF 589
            S  PVI+M+             +LD AC+ WGFF+++NHG+ST  +++++K  +  +    E++   +      EG      V++ +KLDW   F +  LP         P L    R  ++ ++ EL++LAE L+  + E L ++   + + F
Sbjct:    5 STFPVINMELLAGEERPAAME-QLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDD---VNKAEKLDWESTFFVRHLPESNIAD--IPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAF 152          

HSP 2 Score: 34.6538 bits (78), Expect = 8.473e-14
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP+P+ V GL  H+DA  + +L Q
Sbjct:  169 PPCPRPDLVKGLRAHTDAGGIILLFQ 194          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.097e-13
Identity = 49/203 (24.14%), Postives = 83/203 (40.89%), Query Frame = 2
Query:   32 VQELVKNPALVVPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXA-KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQA---FVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYP 628
            V+ LV +    VP  ++ P +D     +   +   PVID+Q              K+  A ++WGFFQ+VNHG+ T+ L++  +    FF    E KK+Y+      +    +      S      W D       P     P    + P    E+L  +S ++K L   L+  + E L +    ++++ +        NYYP
Sbjct:   26 VKGLVDSGITKVPQIFVLPPKDRAKKCETHFV--FPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTIFCYMAP----NPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYP 222          

HSP 2 Score: 37.3502 bits (85), Expect = 1.097e-13
Identity = 16/26 (61.54%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCPQPE  MG   H+D   +TILLQ
Sbjct:  222 PPCPQPELTMGTIQHTDIGFVTILLQ 247          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.101e-13
Identity = 42/154 (27.27%), Postives = 76/154 (49.35%), Query Frame = 2
Query:  128 SQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF 589
            S  PVI+M+             +LD AC+ WGFF+++NHG+ST  +++++K  +  +    E++   +      EG      V++ +KLDW   F +  LP         P L    R  ++ ++ EL++LAE L+  + E L ++   + + F
Sbjct:    5 STFPVINMELLAGEERPAAME-QLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDD---VNKAEKLDWESTFFVRHLPESNIAD--IPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAF 152          

HSP 2 Score: 34.2686 bits (77), Expect = 1.101e-13
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP+P+ V GL  H+DA  + +L Q
Sbjct:  169 PPCPRPDLVEGLRAHTDAGGIILLFQ 194          
The following BLAST results are available for this feature:
BLAST of FC925043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
ACCO2_MALDO5.841e-1629.681-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
GAO1B_WHEAT6.844e-1628.37Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
GAO1A_WHEAT3.397e-1527.88Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
FLS_PETCR1.291e-1425.73Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
ACCO_ACTDE2.290e-1428.481-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCH1_ARATH2.963e-1425.341-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO_MUSAC3.871e-1430.461-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
ACCO1_ORYSI8.473e-1427.271-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCH3_SOLLC1.097e-1324.141-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO1_ORYSJ1.101e-1327.271-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YA03FM1 TF Citrus clementina cDNA clone KN0AAP3YA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925043 ID=FC925043; Name=FC925043; organism=Citrus clementina; type=EST; length=709bp
CCAGATTGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGTTGGTCAAGA
ATCCTGCGTTAGTTGTCCCCGACAGATACATACGTCCAGATCAAGATTCA
CCACTCATTTCTGATGATACTTTGATTTCACAGATACCAGTTATTGACAT
GCAAAGCTTACTTTCTGAAGAATCAATGGATTCTGAGCTAGCCAAGCTCG
ACTTCGCATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAATCATGGAATG
AGCACAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGGATTCTTCAA
TCTCAGCATGGAAGAAAAGAAAAAATATTGGCAGCATCCAGGAGATATGG
AAGGCTTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTGG
GCTGACCTTTTCTCCATGCTGACTCTTCCAGTTCATCTGAGGAAGCCACA
CTTATTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGGAAGTTTACT
CAATGGAATTAAAATCCCTAGCCGAGAACCTAATATCGAAAATGGGAGAA
GTGTTAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGAAAATGGAGT
GCAAGCAATGAGGATGAATTATTACCCCTCCCTGTCCTCAGCCCGAGAAG
GTTATGGGCCTGTCGCCACATTCCGATGCACCTGCCCTTACCATTCTGCT
ACAACTTAA
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