FC925044
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPI1_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=1 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.864e-53 Identity = 109/247 (44.13%), Postives = 154/247 (62.35%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPEFIDII 774 R+ F+GGN+KCNG+ + +K V+ + + + ++ + +AAQN +++ GA+TGE S EML ++ + VI+GHSERR I+ E++E K AL +G+ VI CVGETL++R+A TM+V AQ +A+ + W +V+AYEPVW+IGTG VATP QA+EVH LRKW E A RIIYGGS NG+NC++L P++DGFLVGGASL PEF+ +I Sbjct: 4 RRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSK-QLRIAAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEKVCAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFLVGGASLKPEFMTMI 249
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_CHLT3 (Triosephosphate isomerase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=tpiA PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 8.586e-50 Identity = 123/255 (48.24%), Postives = 153/255 (60.00%), Query Frame = 1 Query: 46 RKFFVGGNWKCN----GTTEEVKKIVSVL-NEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIAD-RVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE-FIDIIKSAE 786 RK FV GNWK N G +I+ +L +E F + +S+++ +AAQNC+ + GA+TGEISA ML N +VILGHSERR NE++E V KV ALS L VI CVGETLEQRE+G T VV Q + + D ++V+AYEPVWAIGTGK ATP QAQEVH +R + E+A RI YGGSV +N KEL PD+DG L+GGASLN E F++IIKSAE Sbjct: 2 RKKFVAGNWKMNKDLLGAVSLATEILQLLGDEAPTCEVAIAPTFLCQQAVFQVIDESAIK----LAAQNCFYEDQGAYTGEISAAMLRNSGCEYVILGHSERRQYFNETDEIVNKKVKNALSVELDVIMCVGETLEQRESGVTKSVVETQVRGGLKDLTAEDMKSVVIAYEPVWAIGTGKTATPEQAQEVHAFIRGIVKDMFGEEVANELRIQYGGSVKTSNAKELFGMPDIDGGLIGGASLNAEDFVEIIKSAE 252
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_PROA2 (Triosephosphate isomerase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=tpiA PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.913e-49 Identity = 116/252 (46.03%), Postives = 146/252 (57.94%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKK----IVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE-FIDIIKSAE 786 RK V GNWK N T E + I+ L E G++ + H+AAQNC + GAFTGE+S ML +VI+GHSERR ++N V KV ALS GL VI CVGETL++RE G T +VV Q K + V+ +IV+AYEPVWAIGTGK A+ +QAQEVH +R + S AA RI YGGSV +N +EL A PD+DG L+GGASLN E F+ I+K+AE Sbjct: 2 RKKIVVGNWKMNKTIAEAVELSSAIIDQLGEVSASCEVGIAPAFPALSGVHGVISGT---GIHLAAQNCHYEDDGAFTGEVSVRMLDEAGCSYVIVGHSERRQYFGDTNPVVNLKVKKALSAGLNVILCVGETLDEREKGITTEVVTCQVKEGLEGVADIGDIVIAYEPVWAIGTGKTASSLQAQEVHASIRATVAGLYSEPAAAGVRIQYGGSVKPSNAEELFAMPDIDGGLIGGASLNAEDFVAIVKAAE 250
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPD (Triosephosphate isomerase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tpiA PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 116/251 (46.22%), Postives = 142/251 (56.57%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLN-PEFIDIIKSA 783 RK V GNWK N T E ++ + L EG L S L + AQNC + GAFTGE+SA M+ VI GHSERR E+N V KV +ALS+GL+VI C GETLEQRE G T DVV AQ + + SNIV+AYEPVWAIGTGK AT QA+EVH +R + E A RI YGGSV +N KEL + P++DG L+GGASLN +F+ I+K+A Sbjct: 2 RKKIVVGNWKMNKTVTESLVLAAEVTAALGEGFTGCDVGIAPPFTALYEVGKLTGSRLA----LVAQNCHFEPDGAFTGEVSASMVREAGCSAVIAGHSERRHCFGETNAIVNRKVKHALSEGLQVIMCAGETLEQREGGVTGDVVTAQVREGLLGIDDISNIVIAYEPVWAIGTGKTATSEQAEEVHLLIRNTVSDLFGEEAAGRLRIQYGGSVKPSNAKELFSMPNIDGGLIGGASLNAADFVAIVKAA 248
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_CHLP8 (Triosephosphate isomerase OS=Chlorobaculum parvum (strain NCIB 8327) GN=tpiA PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 5.209e-47 Identity = 114/249 (45.78%), Postives = 146/249 (58.63%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQT-KAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE-FIDIIKSA 783 R+ V GNWK N T E ++ + + E L V ++ +AAQNC + GAFTGE+S ML +VILGHSERR + E+NE V KV AL++GL+VI CVGETL++REAG T +V AQ + +AD VS S +V+AYEPVWAIGTGK AT QAQ+VH +R + A RI YGGSV +N EL A PD+DG L+GGASL E F+ II++A Sbjct: 2 RRTIVVGNWKMNNTIAESIELATAIAEKVGATKPECEVGIAPTFPALHEVGKTIEWSGVQLAAQNCHYENDGAFTGEVSTRMLAAAGCSYVILGHSERRQLFGETNEIVNRKVKKALAEGLRVILCVGETLDEREAGVTDKIVTAQVVEGLAD-VSDISTLVIAYEPVWAIGTGKTATKEQAQDVHASIRSTIEKLYGDSAARHLRIQYGGSVKPSNAAELFAMPDIDGGLIGGASLKVEDFMAIIEAA 249
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_BACFR (Triosephosphate isomerase OS=Bacteroides fragilis GN=tpiA PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47 Identity = 109/237 (45.99%), Postives = 136/237 (57.38%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 750 RK V GNWK N T +E + LNE L V + V A+NC K+ GA+TGE+SA M+ + +VILGHSERR E+ E + DKV AL+ GL I C+GE LE+REA +VVAAQ ++ D +S IVLAYEPVWAIGTGK A+P QAQE+H +R + EIA T I+YGGS +N KEL A PDVDG L+GGA+L Sbjct: 2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKESGAYTGEVSAAMVASTGAKYVILGHSERRAYYGETVEILKDKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGSCKPSNAKELFANPDVDGGLIGGAAL 238
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_BACFN (Triosephosphate isomerase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=tpiA PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.803e-47 Identity = 109/237 (45.99%), Postives = 136/237 (57.38%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 750 RK V GNWK N T +E + LNE L V + V A+NC K+ GA+TGE+SA M+ + +VILGHSERR E+ E + DKV AL+ GL I C+GE LE+REA +VVAAQ ++ D +S IVLAYEPVWAIGTGK A+P QAQE+H +R + EIA T I+YGGS +N KEL A PDVDG L+GGA+L Sbjct: 2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKESGAYTGEVSAAMVASTGAKYVILGHSERRAYYGETVEILKDKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGSCKPSNAKELFANPDVDGGLIGGAAL 238
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_ALCBS (Triosephosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=tpiA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.409e-46 Identity = 105/252 (41.67%), Postives = 153/252 (60.71%), Query Frame = 1 Query: 40 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE-FIDIIKSAE 786 M R V GNWK NG K +++ + + +L +S++ + +QN ++ GAFTGE+SA ML + +VI+GHSERR + E++ + K A+A + GL I CVGETLE+R++G+T +V Q +A+ D V++++N ++AYEPVWAIGTGK A+P QAQ VH LR++L A P+IA + R++YGGSV N L AQ D+DG L+GGASL + FI I ++AE Sbjct: 1 MNRTPLVAGNWKMNGR----KDLLTEMADALAGYAGAAEVVICPPFPYLAAARSAMPGAVGIGSQNVSEQEDGAFTGEVSAPMLAEVGCGYVIIGHSERRALYGETDAQIASKFAHAQAAGLVPILCVGETLEERDSGNTDTIVCGQLRAVVDAVGVAAFANAIVAYEPVWAIGTGKTASPEQAQAVHACLRQFL-AKDDPDIAQSLRLLYGGSVKADNAALLFAQSDIDGGLIGGASLTADSFIAICQAAE 247
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_PSEU5 (Triosephosphate isomerase OS=Pseudomonas stutzeri (strain A1501) GN=tpiA PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.759e-46 Identity = 111/250 (44.40%), Postives = 147/250 (58.80%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKG-GAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLN-PEFIDIIKSA 783 R+ V GNWK NGT V +++ Q ++ V AQ+C ++ G GA TGE+SA+ LV+L WV++GHSERRL+L E++E V K A A + GLK + C+GETLE+REAG T++VVA Q + D V ++ + V+AYEPVWAIG+G ATP QAQEVH +R L A + IA R++YGGSV N EL A D+DG LVGGASL EF I ++A Sbjct: 2 RRPMVAGNWKMNGTRASVAELIESFRR-QALPAAVEIAVFPSFVHVSQVLDVVDGVQVSVGAQDCALQSGFGALTGEVSADQLVDLGCEWVLVGHSERRLVLGETDEVVSQKFAAAQAGGLKPVLCLGETLEEREAGRTLEVVARQLGQVLDDQGVEAFQSAVIAYEPVWAIGSGLTATPEQAQEVHAAIRDQL-ARSDRRIAEGVRLLYGGSVKADNAAELFAMADIDGGLVGGASLKADEFGAICRAA 249
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_PELCD (Triosephosphate isomerase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tpiA PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.521e-46 Identity = 103/247 (41.70%), Postives = 140/247 (56.68%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE-FIDIIK 777 R+ F+ GNWK + T+ E +V L ++ + + D VAAQNC+ + GAFTGE+S +L + +VI+GHSERR + ES+ F+ KV + GL I C+GETLE+REA T DV+ Q + + + ++ IV+AYEPVWAIGTGK AT QAQ+ H +R + ++A RI+YGGSV N L QPD+DG LVGGASLN E FI I+K Sbjct: 2 RRPFIAGNWKLHKTSAEAAALVGELKGALSDVVDRDIVVAPVFTSLAAVIATLEKSDISVAAQNCYPENQGAFTGEVSPALLKDAGCRYVIVGHSERRQLFAESDAFINRKVKAVIDAGLSAILCIGETLEEREADKTFDVLERQVRCGLEGLDAAAMEQIVVAYEPVWAIGTGKTATDSQAQQAHSFIRSLVNDIFGSKVAQQVRIVYGGSVKPGNVDGLLQQPDIDGALVGGASLNAEDFIRIVK 248 The following BLAST results are available for this feature:
BLAST of FC925044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925044 ID=FC925044; Name=FC925044; organism=Citrus clementina; type=EST; length=788bpback to top |