FC925138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL_LILLO (Pectate lyase OS=Lilium longiflorum PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38 Identity = 86/167 (51.50%), Postives = 104/167 (62.28%), Query Frame = 3 Query: 264 KAEVVAEALSKHA-VDNPDEI---------ASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQFV 734 K VA+A +K A +P+E+ +S STR + KLG C NPID CWRC NW NRK L C GFGR GG G YVVTDP DD +PK GTLR VIQD+PLWI+F + MVI+LKQELI+N+ +T+DGRGANV IA G +T+QFV Sbjct: 33 KKSKVAQAKAKKAYTPHPEEVTNHFNKAVHSSFEGNSTRRNLRTNKLG--QCLATNPIDRCWRCKKNWSANRKDLVKCVKGFGRKTTGGAAGEIYVVTDPSDDSLTDPKFGTLRWGVIQDRPLWIIFGKSMVIRLKQELIINNDKTIDGRGANVQIAGGAQLTVQFV 197
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL_TOBAC (Pectate lyase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.005e-38 Identity = 76/140 (54.29%), Postives = 98/140 (70.00%), Query Frame = 3 Query: 321 IASMVEMSTRNSTERRKLGYFS----CGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQ 728 + + ++T + RR+L C N ID CWRCD NW +NR+++ADC +GFG NAIGG+ GR YVVTD DDD V+PKPGTLR+ VIQ +PLWI+F ++M I+L +ELIV S +T+DGRG NVHI NG I IQ Sbjct: 16 LLTFAALTTATNIPRRQLSNKKYKGPCRAENAIDKCWRCDPNWAENRQKMADCALGFGSNAIGGKLGRIYVVTDNSDDDVVDPKPGTLRYGVIQKEPLWIIFGKNMKIKLSRELIVTSNKTIDGRGFNVHIQNGAGIKIQ 155
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL2_ARATH (Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38 Identity = 73/112 (65.18%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 399 NPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQFV 734 NPID CWR + W NR+ LADC +GFG++A+GG+ G YVVT+P DDP NP+PGTLR+AVIQ KPLWI F RDMVI L+ ELI+NS++T+DGRGA V IA G CITIQ V Sbjct: 37 NPIDSCWRRNPYWASNRRALADCAVGFGKSAVGGKYGSIYVVTNP-SDDPENPRPGTLRYAVIQSKPLWITFARDMVIVLRNELIMNSYKTIDGRGAKVEIAYGPCITIQHV 147
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL6_ARATH (Probable pectate lyase 6 OS=Arabidopsis thaliana GN=At2g02720 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.948e-37 Identity = 67/112 (59.82%), Postives = 88/112 (78.57%), Query Frame = 3 Query: 399 NPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQFV 734 N ID CWR D NW KNRK+LADC +GFGR GG++G YVVTDP D+D + PKPGT+RHAV +D+PLWI+F R M+I+L+QELI+ + +T+DGRGA ++I G +T+QFV Sbjct: 101 NAIDKCWRGDKNWDKNRKKLADCVLGFGRKTTGGKNGPIYVVTDPSDNDLLKPKPGTIRHAVTRDRPLWIIFARSMIIKLQQELIITNDKTIDGRGAKIYITGGAGLTLQFV 212
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL56_SOLLC (Probable pectate lyase P56 OS=Solanum lycopersicum GN=LAT56 PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 4.491e-34 Identity = 68/114 (59.65%), Postives = 84/114 (73.68%), Query Frame = 3 Query: 387 CGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQ 728 C N ID CWRCD W ++R+++ADC +GFG NA+GG+ G +Y+VTD DDD V+PKPGTLR VIQ PLWI F R M I+L +ELIV+S +T+DGRG VHIANG I IQ Sbjct: 43 CMAVNSIDKCWRCDPFWAEDRQKMADCALGFGINAMGGKYGPYYIVTDNSDDDVVDPKPGTLRFGVIQKGPLWITFARSMRIRLTRELIVSSNKTIDGRGKYVHIANGAGIKIQ 156
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL16_ARATH (Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.865e-34 Identity = 67/112 (59.82%), Postives = 84/112 (75.00%), Query Frame = 3 Query: 399 NPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQFV 734 NP+D CWR +W NRK LADC +GFG + +GG+ G YVVT+P D+ NP+PG+LR+ VIQ KPLWI F +DMVI L+ EL+VNS++T+DGRGA V IA G CITIQ V Sbjct: 47 NPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNLYVVTNPYDNAQ-NPQPGSLRYGVIQAKPLWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDV 157
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL4_ARATH (Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.000e-33 Identity = 66/112 (58.93%), Postives = 84/112 (75.00%), Query Frame = 3 Query: 399 NPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQFV 734 NPID CWR + W NR+ LA C +G+G+ AIGG++G YVVT+P D+P P PGTLR+AV Q KPLWI F RDMVI LK +L++NS++T+DGRGA V IANG C+ I+ V Sbjct: 36 NPIDACWRRNPKWATNRQALAHCAVGYGKAAIGGKNGPIYVVTNP-SDNPTRPSPGTLRYAVSQPKPLWITFARDMVIVLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQV 146
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL17_ARATH (Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.229e-33 Identity = 66/112 (58.93%), Postives = 82/112 (73.21%), Query Frame = 3 Query: 399 NPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQFV 734 NP+D CWR +W NR+ LADC +GFG + +GG+ G YVVT+P D+ NP PG+LR+ VIQ KPLWI F +DMVI L EL+VNS++T+DGRGA V IA G CITIQ V Sbjct: 47 NPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNIYVVTNPYDNAQ-NPHPGSLRYGVIQAKPLWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDV 157
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: SBP_CRYJA (Sugi basic protein OS=Cryptomeria japonica PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.106e-32 Identity = 63/118 (53.39%), Postives = 84/118 (71.19%), Query Frame = 3 Query: 384 SCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGG-CITIQFV 734 SC + NPID CWR D NW +NR +LADC +GFG + +GG+ G Y VT+ DDDPVNP PGTLR+ +D+PLWI+F +M I+LK + + ++T DGRGA V+I NGG C+ I+ V Sbjct: 18 SCFSDNPIDSCWRGDSNWAQNRMKLADCAVGFGSSTMGGKGGDLYTVTNS-DDDPVNPAPGTLRYGATRDRPLWIIFSGNMNIKLKMPMYIAGYKTFDGRGAQVYIGNGGPCVFIKRV 134
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNAS (Major pollen allergen Jun a 1 OS=Juniperus ashei PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.464e-32 Identity = 61/110 (55.45%), Postives = 80/110 (72.73%), Query Frame = 3 Query: 384 SCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGG 713 SC + NPID CWR D NW +NR +LADC +GFG + +GG+ G FY VT DD+PVNP PGTLR+ ++K LWI+F ++M I+LK L V +T+DGRGA+VH+ NGG Sbjct: 18 SCYSDNPIDSCWRGDSNWDQNRMKLADCAVGFGSSTMGGKGGDFYTVTST-DDNPVNPTPGTLRYGATREKALWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGG 126 The following BLAST results are available for this feature:
BLAST of FC925138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925138 ID=FC925138; Name=FC925138; organism=Citrus clementina; type=EST; length=735bpback to top |