FC925221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB5G_ARATH (ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.953e-29 Identity = 75/226 (33.19%), Postives = 133/226 (58.85%), Query Frame = 1 Query: 37 DMPAEMKTEGV------GEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 693 D P + + E + G +L V+ +P + A++G SGAGK++L+++LA R G + ++ P ++ F ++SGY Q D P +TV E+LL+SA LRL D + + V ++ + L+++ + VG V G+S +R+R++I VE++ +P ++ +DEPTSGLD+ +A +++ +++ +T GRT++ TIHQP I + F+ +LLL G Sbjct: 39 DQPVKTEEESLKLEDETGNKVKHVLKGVTCRAKPWEILAIVGPSGAGKSSLLEILAARLIPQ--TGSVYVNKRPVDRANFKKISGYVTQKDTLFPLLTVEETLLFSAKLRLKLPADELRSR--VKSLVHELGLEAVATARVGDDSVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALLIIDMLKHMAETRGRTIILTIHQPGFRIVKQFNSVLLLANG 260
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: YO075_YEAST (Uncharacterized ABC transporter ATP-binding protein/permease YOL075C OS=Saccharomyces cerevisiae GN=YOL075C/YOL074C PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.350e-29 Identity = 70/217 (32.26%), Postives = 129/217 (59.45%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYI-----EGDIKISGYPKNQETFARVSGYCEQNDIHS-PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714 ++L SV+ F+PG++ A+MG SG+GK++L+++++GR G I + ++ F V Y Q+D H +TV E+L Y+A LRL + ++ + D ++ + LK ++++G V G+S +++R+T+ V+L+ +P I+ +DEPTSGLD+ +A ++ + + G+T++ TIHQP ++F+ F +LLL + GR + G Sbjct: 708 EILQSVNAIFKPGMINAIMGPSGSGKSSLLNLISGRLKSSVFAKFDTSGSIMFNDIQVSELMFKNVCSYVSQDDDHLLAALTVKETLKYAAALRLHHLTEAERMER-TDNLIRSLGLKHCENNIIGNEFVKGISGGEKRRVTMGVQLLNDPPILLLDEPTSGLDSFTSATILEILEKLCREQGKTIIITIHQPRSELFKRFGNVLLLAKSGRTAFNG 923 HSP 2 Score: 127.102 bits (318), Expect = 9.690e-29 Identity = 81/227 (35.68%), Postives = 135/227 (59.47%), Query Frame = 1 Query: 88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIE-GDIKI----SGYPKNQETFAR--------------VSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 708 L+++ S G + A+MG SG+GKTTL++VLA + +GG G I+ +G N+ R + Y Q D+ SP +T E+L ++A L+L+S TKK + V++++E + LK D++VG GLS +++RL+I ++++NPSI+F+DEPT+GLDA +A +V++T++ + GRT + +IHQP DI D++ +L + G V+Y Sbjct: 44 LVNTFSMDLPSGSVMAVMGGSGSGKTTLLNVLASKISGGLTHNGSIRYVLEDTGSEPNETEPKRAHLDGQDHPIQKHVIMAYLPQQDVLSPRLTCRETLKFAADLKLNSSERTKK--LMVEQLIEELGLKDCADTLVGDNSHRGLSGGEKRRLSIGTQMISNPSIMFLDEPTTGLDAYSAFLVIKTLKKLAKEDGRTFIMSIHQPRSDILFLLDQVCILSK-GNVVY 267
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB9G_ARATH (ABC transporter G family member 9 OS=Arabidopsis thaliana GN=ABCG9 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.350e-29 Identity = 75/219 (34.25%), Postives = 128/219 (58.45%), Query Frame = 1 Query: 1 LSLTFDNMSYFVDMPAEMKTEGVGE--DRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGR--KTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 645 ++L F+N+ Y V + G + + +L ++G +PG + A++G SG+GKT+L+ L GR + G + G+I + P ++ R +G+ Q+D P +TV E+L+++A LRL + +++ VM + L D+++G P + G+S +RKR++I E++ NPS++F+DEPTSGLD+ A ++ + GRTVV TIHQPS Sbjct: 35 VTLKFENLVYTVKLKDSQGCFGKNDKTEERTILKGLTGIVKPGEILAMLGPSGSGKTSLLTALGGRVGEGKGKLTGNISYNNKPLSKAV-KRTTGFVTQDDALYPNLTVTETLVFTALLRLPNSFKKQEKIKQAKAVMTELGLDRCKDTIIGGPFLRGVSGGERKRVSIGQEILINPSLLFLDEPTSGLDSTTAQRIVSILWELARGGRTVVTTIHQPS 252
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: PDR1_SCHPO (ATP-binding cassette transporter pdr1 OS=Schizosaccharomyces pombe GN=pdr1 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.653e-28 Identity = 75/216 (34.72%), Postives = 127/216 (58.80%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHE 729 Q+L +VSG + LTAL+G + +GK+ L+ +L+ R G +EG+I +SG KN + + GY +N + TV E+L A LR S ++ +V+ V++ + L + D +VG G GLS ++ L+IAVEL A P SI+ +DEP +GLD+++A +++ ++ +G +++C++ QPS I E FD +L+L G +Y +G + Sbjct: 775 QILTNVSGYLKKNTLTALLGENKSGKSVLLRILSQRGIAGSVEGEITLSGL-KNPKNLRKRIGYVRKNPLFISEYTVRETLRLHAALRQSKQRSLSEQYAYVEYVIDFLGLGEVADFIVGDMG-KGLSLYHKRLLSIAVELSARPGSILLLDEPANGLDSQSAWMLVCILQKLARSGLSILCSVSQPSSRILELFDMMLILDLNGNTVYYDTMGRD 988
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG5_MOUSE (ATP-binding cassette sub-family G member 5 OS=Mus musculus GN=Abcg5 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.653e-28 Identity = 73/215 (33.95%), Postives = 122/215 (56.74%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGR-KTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRL---SSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717 Q+L VS G + ++G SG+GKTTL+D ++GR + G +EG++ ++G ++ F Y Q+D+ +TV E+L Y+A L L S+D KK V+ VM + L + D M+G G+S+ +R+R++IA +L+ +P ++ +DEPT+GLD A ++ + R V+ TIHQP ++F+ FD++ +L G V P Sbjct: 68 QILKDVSLYIESGQIMCILGSSGSGKTTLLDAISGRLRRTGTLEGEVFVNGCELRRDQFQDCFSYVLQSDVFLSSLTVRETLRYTAMLALCRSSADFYNKK----VEAVMTELSLSHVADQMIGSYNFGGISSGERRRVSIAAQLLQDPKVMMLDEPTTGLDCMTANQIVLLLAELARRDRIVIVTIHQPRSELFQHFDKIAILTYGELVFCGTP 278
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG8_MOUSE (ATP-binding cassette sub-family G member 8 OS=Mus musculus GN=Abcg8 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.819e-28 Identity = 74/209 (35.41%), Postives = 120/209 (57.42%), Query Frame = 1 Query: 91 LHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIE-GDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714 + ++S R G + A++G SG G+ +L+DV+ GR GG ++ G I I+G P + + + Q+D P +TV E+L + A +RL +R V++V+ + L+ ++ VG V G+S +R+R++I V+L+ NP I+ +DEPTSGLD+ A ++ T+ R V+ ++HQP DIF FD L+LL G IY G Sbjct: 89 IRNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKMKSGQIWINGQPSTPQLVRKCVAHVRQHDQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSRLAKGNRLVLISLHQPRSDIFRLFD-LVLLMTSGTPIYLG 296
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG5_RAT (ATP-binding cassette sub-family G member 5 OS=Rattus norvegicus GN=Abcg5 PE=2 SV=3) HSP 1 Score: 122.094 bits (305), Expect = 3.117e-27 Identity = 71/213 (33.33%), Postives = 120/213 (56.34%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGR-KTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRL-SSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717 ++L VS G ++G SG+GKTTL+D ++GR + G +EG++ ++G ++ F Y Q+D+ +TV E+L Y+A L L SS D +K V+ V+ + L + D M+G G+S+ +R+R++IA +L+ +P ++ +DEPT+GLD A ++ + R V+ TIHQP ++F FD++ +L G V P Sbjct: 68 KILKDVSLYIESGQTMCILGSSGSGKTTLLDAISGRLRRTGTLEGEVFVNGCELRRDQFQDCVSYLLQSDVFLSSLTVRETLRYTAMLALRSSSADFYDKK--VEAVLTELSLSHVADQMIGNYNFGGISSGERRRVSIAAQLLQDPKVMMLDEPTTGLDCMTANHIVLLLVELARRNRIVIVTIHQPRSELFHHFDKIAILTYGELVFCGTP 278
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG5_HUMAN (ATP-binding cassette sub-family G member 5 OS=Homo sapiens GN=ABCG5 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.918e-25 Identity = 70/211 (33.18%), Postives = 117/211 (55.45%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRK-TGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714 Q+L VS G + ++G SG+GKTTL+D ++GR G G++ ++G +E F Y Q+D +TV E+L Y+A L + +K V+ VM + L + D ++G + G+ST +R+R++IA +L+ +P ++ DEPT+GLD A ++ + R VV TIHQP ++F+ FD++ +L G +I+ G Sbjct: 67 QILKDVSLYVESGQIMCILGSSGSGKTTLLDAMSGRLGRAGTFLGEVYVNGRALRREQFQDCFSYVLQSDTLLSSLTVRETLHYTALLAIRRGNPGSFQKK-VEAVMAELSLSHVADRLIGNYSLGGISTGERRRVSIAAQLLQDPKVMLFDEPTTGLDCMTANQIVVLLVELARRNRIVVLTIHQPRSELFQLFDKIAILS-FGELIFCG 275
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB23G_ARATH (ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.918e-25 Identity = 87/251 (34.66%), Postives = 137/251 (54.58%), Query Frame = 1 Query: 4 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGR-------KTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS--GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 726 SLT N+SY ++ +L+SVS A + A++G SG GK+TL+ +++GR + + + KI+ Y NQ R+ G+ Q+D P +TV E+L+YSA L D K+R+ V+ ++ + L + DS VG G+S +RKR++IAVE++ +P I+ +DEPTSGLD+R + V+ + + RTV+ +IHQPS I + + L+L RG VI+ G L H Sbjct: 51 SLTVTNLSYTIN-------------HTPILNSVSLAAESSKILAVVGPSGTGKSTLLKIISGRVNHKALDPSSAVLMNNRKITDY--NQ--LRRLCGFVPQDDDLLPLLTVKETLMYSAKFSLR-DSTAKEREERVESLLSDLGLVLVQDSFVGEGDEEDRGVSGGERKRVSIAVEMIRDPPILLLDEPTSGLDSRNSLQVVELLATMAKSKQRTVLFSIHQPSYRILDYISDYLILSRGS-VIHLGSLEH 282
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.891e-24 Identity = 69/212 (32.55%), Postives = 122/212 (57.55%), Query Frame = 1 Query: 88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN-TVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 720 +L +++ P + A++G SGAGK+TL+D+LA R + G I ++ N ++ ++S Y Q+D P +TV E+ +SA L L ++ K V +++ + L L + +G GLS +R+R++I + L+ +P ++ +DEPTSGLD+++A V++ +++ R V+ +IHQPS I D +LLL + G ++Y G L Sbjct: 30 ILRNITLTSHPSQILAIIGPSGAGKSTLLDILAARTSP--TSGSILLNSVLINPSSYRKISSYVPQHDTFFPLLTVSETFTFSASLLLPKNLS--KVSSVVASLLKELNLTHLAHTRLG----QGLSGGERRRVSIGLSLLHDPEVLLLDEPTSGLDSKSAFDVVQILKSIATSRERIVILSIHQPSFKILSLIDRVLLLSK-GTIVYHGRL 232 The following BLAST results are available for this feature:
BLAST of FC925221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 300
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925221 ID=FC925221; Name=FC925221; organism=Citrus clementina; type=EST; length=733bpback to top |