FC925221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: YECC_ECOLI (Uncharacterized amino-acid ABC transporter ATP-binding protein yecC OS=Escherichia coli (strain K12) GN=yecC PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 59/218 (27.06%), Postives = 97/218 (44.50%), Query Frame = 1 Query: 88 LLHSVSGAFRPGILTALMGVSGAGKTTLM---DVLAGRKTGGYIEGDIKISGYPKNQETFARVS------GYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714 +LH + +PG + A++G SG+GKTTL+ ++L + G GDI I + + + G+ QN P+ TV E+++ + V + ++ EL+ L P LS Q++R+ IA L P +I DEPTS LD V+ T+R RT+V H+ S + D + + + GR++ G Sbjct: 18 VLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVI-----VKGEPKEEATARARELLAKVGLAGKETSYP--RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSF-ARDVADRAIFMDQ-GRIVEQG 226
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: Y5847_STRAW (Putative ABC transporter ATP-binding protein SAV_5847 OS=Streptomyces avermitilis GN=SAV_5847 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 62/207 (29.95%), Postives = 100/207 (48.31%), Query Frame = 1 Query: 121 GILTALMGVSGAGKTTLMDVLAG---RKTGGYIEGDIKISGYPKNQET---FARVSGYCEQNDI-HSPYVTVYESLLYSAW-LRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714 G L L+G SG GK+T++ ++G TGG + G + ++G A V G Q+ + H TV + L Y L ++ DV ++ V+E ++L+ L L D + S LS Q++R+ I L +P ++ +DEPTS LD AA V+ ++ V D G TV+ H+ + + D + LL G + G Sbjct: 29 GELVLLVGPSGVGKSTVLGAVSGLVPHFTGGTLRGRVTVAGRDTRTHKPRELADVVGTVGQDPLSHFVTDTVEDELAYGMESLGIAPDVMRRR----VEETLDLLGLAELRDRPI-----STLSGGQQQRVAIGSVLTPHPKVLVLDEPTSALDPAAAEEVLAVLQRLVHDLGTTVLMAEHRLE-RVVQYADRVALLPAPGAPLTLG 225
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: RBSA_STRA5 (Ribose import ATP-binding protein rbsA OS=Streptococcus agalactiae serotype V GN=rbsA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 60/210 (28.57%), Postives = 101/210 (48.10%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAG---RKTGG-YIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLP---GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 693 ++L + + G + ALMG +GAGK+TLM++L G TG YI+G+ + P+ E F + E N P +TV E+L ++ + + +K +M L++ V +P + LS Q++ + IA L+ SI+ MDEPT+ L R + R +R G VV H+ +IF+ D + +++ G Sbjct: 16 KVLEKIDLELQSGQIHALMGENGAGKSTLMNILTGLFPASTGTIYIDGEERTFSNPQEAEEFGISFIHQEMNTW--PEMTVLENLFLGREIKTTFGLLNQK-------LMRQKALETFKRLGVTIPLDIPIGNLSVGQQQMIEIAKSLLNQLSILVMDEPTAALTDRETENLFRVIRGLKQEGVGVVYISHRME-EIFKITDFVTVMRDG 215
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: RBSA_STRA3 (Ribose import ATP-binding protein rbsA OS=Streptococcus agalactiae serotype III GN=rbsA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 59/210 (28.10%), Postives = 102/210 (48.57%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAG---RKTGG-YIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLP---GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 693 ++L + + G + ALMG +GAGK+TLM++L G TG YI+G+ + P+ E F + E N P +TV E+L ++ + + +K +M L++ V +P + LS Q++ + IA L+ SI+ MDEPT+ L R + R +R+ G +V H+ +IF+ D + +++ G Sbjct: 16 KVLEKIDLELQSGQIHALMGENGAGKSTLMNILTGLFPASTGTIYIDGEERTFSNPQEAEEFGISFIHQEMNTW--PEMTVLENLFLGREIKTTFGLLNQK-------LMRQKALEAFKRLGVTIPLDIPIGNLSVGQQQMIEIAKSLLNQLSILVMDEPTAALTDRETENLFRVIRSLKQEGVGIVYISHRME-EIFKITDFVTVMRDG 215
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: RBSA_BACSK (Ribose import ATP-binding protein rbsA OS=Bacillus clausii (strain KSM-K16) GN=rbsA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 63/220 (28.64%), Postives = 100/220 (45.45%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG------YPKNQETFARVSGYCEQNDIHSPYVTVYESLLY--------SAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 702 Q+L +VS G + ALMG +GAGK+TLM +L G EG +++ G +PK+ E + E N + P ++V E+L + WL+ TKK + ++ + + LK G LS +++ + IA L+ N II MDEPT+ L R + +R + G T V H+ +IF + +L+ G V Sbjct: 16 QVLKNVSFTLEKGEIHALMGENGAGKSTLMKILTGIYPRD--EGVVRVKGKEVAYTHPKDAEKDGIAVIHQELNIL--PELSVAENLFLGNEYTVGKTGWLK------TKKMNEYAEQQLAELGLKVKASDRAG-----ALSVGKQQLIEIAKALMTNADIIIMDEPTAALTDREIDTLFTVIRGLQEKGVTFVYISHRME-EIFSLCQRITVLRDGNYV 219
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: PHNC_PSEST (Phosphonates import ATP-binding protein phnC OS=Pseudomonas stutzeri GN=phnC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 68/230 (29.57%), Postives = 107/230 (46.52%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAG-----RKTGGYIE---GDIKISGYPKNQETFARVS-GYCEQNDIHSPYVTVYESLL---------YSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN-TVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717 Q L + A +PG + AL+G SG+GK+TL+ LAG R GG IE +++ +G + R GY Q ++V +++L + L + SD + K++ M E + L E + S LS Q++R+ IA L +I DEP + LD +A VM + + G+TVV T+HQ +D + + +GGR+ Y GP Sbjct: 18 QALFDLGLAIQPGEMVALIGASGSGKSTLLRHLAGLACCDRSAGGRIEVLGREVQATGRLHGEVRRLRADIGYIFQQFNLVTRLSVLDNVLLGFLGRMPRWRGSLGMFSD-EQKRQAMAALERVGLAERAAQR--------ASTLSGGQQQRVAIARALTQQAEVILADEPIASLDPESARKVMEILADINRQDGKTVVVTLHQ--VDYALRYCSRAVALKGGRIHYDGP 236
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: MDR3_CAEEL (Multidrug resistance protein 3 OS=Caenorhabditis elegans GN=pgp-3 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 67/236 (28.39%), Postives = 103/236 (43.64%), Query Frame = 1 Query: 7 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP---KNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS----IDIFEAFDELLLLKRG 693 LTFD + + E+K +L VS PG AL+G SG GK+T + +L + G IK+ G P N G +Q I TV E++ L D++ + E + +L D+++G G LS Q++R+ IA +V P I+ +DE TS LD + +V +T + GRT +C H+ S FD+ L+ +RG Sbjct: 376 LTFDGIEFTYPTRPELK----------ILKGVSFEVNPGETVALVGHSGCGKSTSIGLL--MRFYNQCAGMIKLDGIPIQEYNIRWLRSTIGIVQQEPIIF-VATVAENIRMGDVLITDQDIEEACKMANAHEF--ICKLSDRYDTVIG-AGAVQLSGGQKQRVAIARAIVRKPQILLLDEATSALDTESERMV-QTALDKASEGRTTLCIAHRLSTIRNASKILVFDQGLIAERG 594
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: CYSA_METCA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Methylococcus capsulatus GN=cysA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 56/208 (26.92%), Postives = 96/208 (46.15%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK-NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSS----DVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 693 Q L + G L AL+G SG GKTTL+ ++AG + G I + G ++ R G+ Q+ +++V+E++ + +R + + ++R V E++ELV+L L D G LS QR+R+ +A L P ++ +DEP LDA+ + R +R D + + E D +++L G Sbjct: 16 QALKGIDLTIGSGELVALLGPSGCGKTTLLRIIAGLEAAD--SGQILLHGEDTTHRHVRERRVGFVFQHYALFRHMSVFENIAFGLRVRPRGQRPPEAEIRRR---VQELLELVQLDWLADRHPGQ-----LSGGQRQRIALARALAVEPKVLLLDEPFGALDAKVRKDLRRWLRRLHDGLHITSVFVTHDQEEALEVADRVVVLNAG 213
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: CYSA_BORPE (Sulfate/thiosulfate import ATP-binding protein cysA OS=Bordetella pertussis GN=cysA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 55/203 (27.09%), Postives = 96/203 (47.29%), Query Frame = 1 Query: 91 LHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKR-KMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 693 L VS G L AL+G SG GKTTL+ ++AG ++ G + +G + + R G+ Q+ ++TV+E++ + +R S ++ R + V +++ LV+L L D + LS QR+R+ +A L P ++ +DEP LDA+ + R +R D + + E D ++L+ G Sbjct: 18 LDEVSLHIETGELVALLGPSGCGKTTLLRIIAGLESAD--AGSVLFAGEDATEVDVRQRQVGFVFQHYALFKHMTVFENVAFGLRVRHRSQRPSEARIRAKVLDLLGLVQLDWLADRYP-----AQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRRLHDELHVASVFVTHDQEEALEVTDRVVLMNAG 213
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: CYSA_BORPA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Bordetella parapertussis GN=cysA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 55/203 (27.09%), Postives = 96/203 (47.29%), Query Frame = 1 Query: 91 LHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKR-KMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 693 L VS G L AL+G SG GKTTL+ ++AG ++ G + +G + + R G+ Q+ ++TV+E++ + +R S ++ R + V +++ LV+L L D + LS QR+R+ +A L P ++ +DEP LDA+ + R +R D + + E D ++L+ G Sbjct: 18 LDEVSLHIETGELVALLGPSGCGKTTLLRIIAGLESAD--AGSVLFAGEDATEVDVRQRQVGFVFQHYALFKHMTVFENVAFGLRVRHRSQRPSEARIRAKVLDLLGLVQLDWLADRYP-----AQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRRLHDELHVASVFVTHDQEEALEVADRVVLMNAG 213 The following BLAST results are available for this feature:
BLAST of FC925221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 300
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925221 ID=FC925221; Name=FC925221; organism=Citrus clementina; type=EST; length=733bpback to top |