FC925221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: WHT3_CAEEL (ABC transporter ATP-binding protein/permease wht-3 OS=Caenorhabditis elegans GN=wht-3 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38 Identity = 92/218 (42.20%), Postives = 142/218 (65.14%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIE-GDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHES 732 QLL+ VSG +PG + ALMG SGAGKTTLM+VL R G + G +K++G +E + +SG+ +Q +I P +TV E L+ A LR+ ++ T++ + VDE++E++ L++ D +G PG V G+S + +RLT A EL++NPS++F DEPTSGLD+ AA V++ ++N ++GRT+ IHQP+ ++F FD+++ L G P HES Sbjct: 55 QLLNRVSGIAKPGEMVALMGASGAGKTTLMNVLMCRNMKGLEKNGTVKVNGTKIGKE-ISLISGFAQQQEIFIPTLTVDEYLMIQARLRMKANKHTRRER--VDEIIEMLRLQNCRDLKIGTPGLVKGISGGEARRLTFACELLSNPSLLFADEPTSGLDSFMAASVVQILKNLANSGRTL---IHQPTAELFFQFDKIIFLSMGKTAFMGTP--HES 264
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB28G_ARATH (ABC transporter G family member 28 OS=Arabidopsis thaliana GN=ABCG28 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38 Identity = 78/211 (36.97%), Postives = 134/211 (63.51%), Query Frame = 1 Query: 88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 720 L+ V+G PG ++A+MG SGAGKTT + L G+ G + G I ++G ++ +++ ++ G+ Q+DI +TV E+L +SA RL +D+ ++ + V+ V+E + L+ + DS+VG G+S QRKR+ + +E+V PS++ +DEPTSGLD+ ++ +++R +R G + +HQPS +F FD+L+LL +GG + Y GP+ Sbjct: 515 LMRCVTGKLSPGRVSAVMGPSGAGKTTFLTALTGKAPGCIMTGMILVNGKVESIQSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLPADLPKPEKVLVVERVIESLGLQHVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVVHQPSYTLFRMFDDLILLAKGGLICYQGPV 725
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG1_MOUSE (ATP-binding cassette sub-family G member 1 OS=Mus musculus GN=Abcg1 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.005e-38 Identity = 98/243 (40.33%), Postives = 151/243 (62.14%), Query Frame = 1 Query: 1 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAG-RKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 726 +++ F ++SY V K +G LL +SG F G L A+MG SGAGK+TLM++LAG R+TG ++G + I+G P++ F +VS Y Q+D+ P++TV E+++ SA L+L + D +R+M V E++ + L ++ G LS QRKRL IA+ELV NP ++F DEPTSGLD+ + V+ ++ GR++VCTIHQPS +FE FD+L +L + G+ +Y G + + Sbjct: 75 VNIEFKDLSYSVPEGPWWKKKGYKT----LLKGISGKFNSGELVAIMGPSGAGKSTLMNILAGYRETG--MKGAVLINGMPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQ-EKDEGRREM-VKEILTALGLLPCANTRTG-----SLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIVCTIHQPSAKLFELFDQLYVLSQ-GQCVYRGKVSN 303
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG1_HUMAN (ATP-binding cassette sub-family G member 1 OS=Homo sapiens GN=ABCG1 PE=2 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 3.925e-38 Identity = 97/239 (40.59%), Postives = 150/239 (62.76%), Query Frame = 1 Query: 1 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAG-RKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714 +++ F ++SY V + +G LL +SG F G L A+MG SGAGK+TLM++LAG R+TG ++G + I+G P++ F +VS Y Q+D+ P++TV E+++ SA L+L + D +R+M V E++ + L S ++ G LS QRKRL IA+ELV NP ++F DEPTSGLD+ + V+ ++ GR+++CTIHQPS +FE FD+L +L + G+ +Y G Sbjct: 75 VNIEFRDLSYSVPEGPWWRKKGYKT----LLKGISGKFNSGELVAIMGPSGAGKSTLMNILAGYRETG--MKGAVLINGLPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQ-EKDEGRREM-VKEILTALGLLSCANTRTG-----SLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIICTIHQPSAKLFELFDQLYVLSQ-GQCVYRG 299
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG1_DICDI (ABC transporter G family member 1 OS=Dictyostelium discoideum GN=abcG1 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.744e-38 Identity = 85/239 (35.56%), Postives = 146/239 (61.09%), Query Frame = 1 Query: 1 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGR-KTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG--VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 708 + +F +++++V + + K + + + Q+L +++G G + A+MG SGAGKTTL+D+LA R G G + ++G + F ++ GY Q+D P +TV E+L + A L++ DV K++ V ++++ + L D++VG + G+S +R+R+TI++EL+ PS+I +DEPTSGLDA + VM ++ +GRT++CTIHQP +I++ FD LLLL G + Y Sbjct: 112 IDFSFKDINHYVQITEKGKKKKISK---QILTNINGHIESGTIFAIMGPSGAGKTTLLDILAHRLNING--SGTMYLNGNKSDFNIFKKLCGYVTQSDSLMPSLTVRETLNFYAQLKMPRDVPLKEKLQRVQDIIDEMGLNRCADTLVGTADNKIRGISGGERRRVTISIELLTGPSVILLDEPTSGLDASTSFYVMSALKKLAKSGRTIICTIHQPRSNIYDMFDNLLLLGDGNTIYY 345
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCGM_DICDI (ABC transporter G family member 22 OS=Dictyostelium discoideum GN=abcG22 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.948e-37 Identity = 95/250 (38.00%), Postives = 150/250 (60.00%), Query Frame = 1 Query: 1 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVG--LPG---VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT-VRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG--PLGH 726 L++TF +++Y V V + ++Q+L VSG PG L A+ G SG+GKTTL+D+LA RK G I G + I+G + + + R+ Y Q D+ P +TV E+L + A L+L K++ +++++E + L D+ +G LPG + GLS +++R++I LV +PSI+ +DEPTSGLD +A VM+T V T TV+CTIHQP +IF+ F ++++L GR++Y G P+ H Sbjct: 29 LTITFKDLAYSVT---------VKKKKMQILKGVSGTVTPGELVAVFGPSGSGKTTLLDILANRKESGEISGAVLING-NEIDDDYKRLCSYVVQEDVLLPTITVRETLRFYADLKLPKSWTEKEKHERIEQILEQIGLSHRADAKIGGVLPGGIVLRGLSGGEKRRVSIGCGLVTSPSIVLLDEPTSGLDTTSAMAVMKTLVELTQQKSVTVICTIHQPRSEIFKLFTKIMVLAE-GRLVYYGNRPVEH 267
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB7G_ARATH (ABC transporter G family member 7 OS=Arabidopsis thaliana GN=ABCG7 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.948e-37 Identity = 87/217 (40.09%), Postives = 138/217 (63.59%), Query Frame = 1 Query: 88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHE 729 LL +VSG +PG L A+MG SG+GKTTL++VLAG+ + ++ G ++++G P + + + + Q D+ +TV E+L ++A L+L ++R +V+ ++ + L S DS VG V G+S ++KRL++A EL+A+PS+IF DEPT+GLDA A VM T++ G TV+C+IHQP ++ FD+++LL G ++YAGP G E Sbjct: 90 LLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLSLSPRLHLSGLLEVNGKPSSSKAYKLA--FVRQEDLFFSQLTVRETLSFAAELQLPEISSAEERDEYVNNLLLKLGLVSCADSCVGDAKVRGISGGEKKRLSLACELIASPSVIFADEPTTGLDAFQAEKVMETLQKLAQDGHTVICSIHQPRGSVYAKFDDIVLLTE-GTLVYAGPAGKE 303
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: WBC30_ARATH (Putative white-brown complex homolog protein 30 OS=Arabidopsis thaliana GN=WBC30 PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37 Identity = 76/209 (36.36%), Postives = 133/209 (63.64%), Query Frame = 1 Query: 88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714 +L SV+G PG ++A+MG SGAGKTT + LAG+ TG G I I+G + ++ +++G+ Q+D+ +TV E+L +SA RLS+ + + + ++ V+E + L+ + DS+VG G+S QRKR+ + VE+V PS++ +DEPT+GLD+ ++ +++R +R G + +HQPS +++ FD++++L +GG +Y G Sbjct: 481 ILRSVTGKIMPGRVSAVMGPSGAGKTTFLSALAGKATGCTRTGLILINGRNDSINSYKKITGFVPQDDVVHGNLTVEENLRFSARCRLSAYMSKADKVLIIERVIESLGLQHVRDSLVGTIEKRGISGGQRKRVNVGVEMVMEPSLLILDEPTTGLDSASSQLLLRALRREALEGVNICMVVHQPSYTMYKMFDDMIILAKGGLTVYHG 689
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG8_DICDI (ABC transporter G family member 8 OS=Dictyostelium discoideum GN=abcG8 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.263e-36 Identity = 98/263 (37.26%), Postives = 155/263 (58.94%), Query Frame = 1 Query: 1 LSLTFDNMSYFVD--------------------MPAEMKTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVG--LPG---VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714 + LTF N+SY V+ + + KTE E + +L++V G G L ALMG SG+GK+TL+D+LA RK+ G I G + ++G + E + + Y Q D+ TV+E+L + A L+L + +K K V++V+E V L DS VG L G V+GLS +++R++I L+ NPS+IF+DEPTSGLD+ AA +M+T+ N G TV+C+IHQP +IF+ ++++++ + G++IY+G Sbjct: 23 VQLTFKNISYKVENKNYNKNKKEKNKNKIDPEFVNLDNKTENSNEKEITILYNVGGVIEKGELVALMGPSGSGKSTLLDILAQRKSTGKITGQLLVNG-KEIGEAYKKYCSYVTQEDVLLQTYTVFETLKFYADLKLPGVSEIEKIKR-VEKVIEDVGLTLKRDSRVGGVLAGGVAVTGLSGGEKRRVSIGCGLITNPSLIFLDEPTSGLDSVAALQIMKTLLNLTLKGVTVICSIHQPRPEIFQLINKVMVIIK-GKMIYSG 282
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG4_HUMAN (ATP-binding cassette sub-family G member 4 OS=Homo sapiens GN=ABCG4 PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.649e-36 Identity = 86/202 (42.57%), Postives = 128/202 (63.37%), Query Frame = 1 Query: 88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 693 LL +SG F L +MG SGAGK+T M++LAG + G ++G I ++G P+ TF ++S Y Q+D+ P++TV E+++ SA L+LS + KK V E++ + L S + + L LS QRKRL IA+ELV NP ++F DEPTSGLD+ + V+ +++ GRT++CTIHQPS +FE FD+L +L +G Sbjct: 84 LLKCLSGKFCRRELIGIMGPSGAGKSTFMNILAGYRESG-MKGQILVNGRPRELRTFRKMSCYIMQDDMLLPHLTVLEAMMVSANLKLSEKQEVKKE--LVTEILTALGLMSCSHTRTAL-----LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAQGGRTIICTIHQPSAKLFEMFDKLYILSQG 277 The following BLAST results are available for this feature:
BLAST of FC925221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 300
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925221 ID=FC925221; Name=FC925221; organism=Citrus clementina; type=EST; length=733bpback to top |