FC925221

Overview
NameFC925221
Unique NameFC925221
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB27G_ARATH (ABC transporter G family member 27 OS=Arabidopsis thaliana GN=ABCG27 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36
Identity = 85/236 (36.02%), Postives = 142/236 (60.17%), Query Frame = 1
Query:   10 TFDNMSYFVDMPAEMKTEGV-GEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714
            TF     F+D+  ++ T+G+       +L+ +SG+  PG L ALMG SG+GKTTL++ L GR     I G +  +  P ++    R+ G+  Q+D+  P++TV E+L Y+A LRL   +  ++++     V++ + L+   D+M+G   V G+S  +RKR+ I  E++ NPS++ +DEPTS LD+  A  +++ +      G+T+V TIHQPS  +F  FD+L++L RG  ++Y G
Sbjct:  140 TFPIYLKFIDITYKVTTKGMTSSSEKSILNGISGSAYPGELLALMGPSGSGKTTLLNALGGRFNQQNIGGSVSYNDKPYSKHLKTRI-GFVTQDDVLFPHLTVKETLTYTALLRLPKTLTEQEKEQRAASVIQELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIMTNPSLLLLDEPTSSLDSTTALKIVQMLHCIAKAGKTIVTTIHQPSSRLFHRFDKLVVLSRGS-LLYFG 373          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 3.674e-36
Identity = 82/211 (38.86%), Postives = 135/211 (63.98%), Query Frame = 1
Query:   85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717
            ++L +++G  +PG L A++G +G GK++L+DVLA RK    + GD+ I+G P+    F   SGY  Q+D+    +TV E+L +SA LRL++ +   ++   ++ V++ + L  + DS VG   + G+S  +RKR +I +EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L LL   GR+++ GP
Sbjct:   62 EILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPSGLSGDVLINGAPR-PANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLATTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGRLMFHGP 269          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG2_BOVIN (ATP-binding cassette sub-family G member 2 OS=Bos taurus GN=ABCG2 PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.674e-36
Identity = 82/211 (38.86%), Postives = 137/211 (64.93%), Query Frame = 1
Query:   85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717
            ++L +++G  +PG L A++G +G GK++L+D+LA RK    + GD+ I+G P+    F   SGY  Q+D+    +TV E+L +SA LRL + + + ++   +++V++ + L  + DS VG   + G+S  +RKR +IA+EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L LL   GR+++ GP
Sbjct:   61 EILANINGVMKPG-LNAILGPTGGGKSSLLDILAARKDPHGLSGDVLINGAPR-PANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTSYEKNERINKVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGRLMFHGP 268          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB21G_ARATH (ABC transporter G family member 21 OS=Arabidopsis thaliana GN=ABCG21 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.674e-36
Identity = 88/223 (39.46%), Postives = 139/223 (62.33%), Query Frame = 1
Query:   88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG--------GRVI-YAGPLGHE 729
            +L  VSG  +PG L A++G SG+GKTTL+  LAGR  G  + G +  +G P       R +G+  Q+D+  P++TV E+L Y+A LRL  ++  K++   V+ V+  + L    +S++G   + G+S  +RKR++I  E++ NPS++ +DEPTSGLD+  AA ++ T+R+    GRTVV TIHQPS  ++  FD++L+L  G        GRV+ Y G +G++
Sbjct:   99 VLKCVSGIVKPGELLAMLGPSGSGKTTLVTALAGRLQGK-LSGTVSYNGEPFTSSV-KRKTGFVTQDDVLYPHLTVMETLTYTALLRLPKELTRKEKLEQVEMVVSDLGLTRCCNSVIGGGLIRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAARIVATLRSLARGGRTVVTTIHQPSSRLYRMFDKVLVLSEGCPIYSGDSGRVMEYFGSIGYQ 319          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.266e-36
Identity = 85/206 (41.26%), Postives = 130/206 (63.11%), Query Frame = 1
Query:   88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVE---LKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN-TVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 693
            +L  VS   R   +TA+ G SGAGKTTL+++LAG+ + G + G + ++G P +   + RVSG+  Q D   P++TV E+L YSA LRL +     KRK    +V  L++   L+ + DS +G    SG+S  +R+R++I VELV +P++I +DEPTSGLD+ +A  V+  +++ T+  G+T+V TIHQP   I E  D ++LL  G
Sbjct:   50 ILKDVSCDARSAEITAIAGPSGAGKTTLLEILAGKVSHGKVSGQVLVNGRPMDGPEYRRVSGFVPQEDALFPFLTVQETLTYSALLRLKT-----KRKDAAAKVKRLIQELGLEHVADSRIGQGSRSGISGGERRRVSIGVELVHDPNVILIDEPTSGLDSASALQVVTLLKDMTIKQGKTIVLTIHQPGFRILEQIDRIVLLSNG 250          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG2_PIG (ATP-binding cassette sub-family G member 2 OS=Sus scrofa GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 83/211 (39.34%), Postives = 135/211 (63.98%), Query Frame = 1
Query:   85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717
            ++L +++G  +PG L A++G +G GK++L+DVLA RK    + GD+ I+G P+    F   SGY  Q+D+    +TV E+L +SA LRL + +   ++   ++ V++ + L  + DS VG   + G+S  +RKR +IA+EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L LL   GR+++ GP
Sbjct:   62 EILTNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPHGLSGDVLINGAPR-PANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINMVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGRLMFHGP 269          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG2_MOUSE (ATP-binding cassette sub-family G member 2 OS=Mus musculus GN=Abcg2 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 85/237 (35.86%), Postives = 145/237 (61.18%), Query Frame = 1
Query:    7 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717
            L+F +++Y V + +        E   ++L  ++G  +PG L A++G +G GK++L+DVLA RK    + GD+ I+G P+    F   SGY  Q+D+    +TV E+L +SA LRL + +   ++   ++ +++ + L+ + DS VG   + G+S  +RKR +I +EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L LL   G++++ GP
Sbjct:   37 LSFHHITYRVKVKSGFLVRKTVEK--EILSDINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPKGLSGDVLINGAPQPAH-FKCCSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMKNHEKNERINTIIKELGLEKVADSKVGTQFIRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGKLVFHGP 268          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB22G_ARATH (ABC transporter G family member 22 OS=Arabidopsis thaliana GN=ABCG22 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 80/210 (38.10%), Postives = 135/210 (64.29%), Query Frame = 1
Query:   85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714
            ++L  +SG+  PG + ALMG SG+GKTTL+ +LAGR +     G +  +  P ++   +++ G+  Q+D+  P++TV E+L Y+A LRL   +  +++K    +V++ + L+   D+M+G   V G+S  +RKR++I  E++ NPS++ +DEPTSGLD+  A   +  + +  + G+TV+ TIHQPS  +F  FD+L+LL RG  ++Y G
Sbjct:  178 EILTGISGSVNPGEVLALMGPSGSGKTTLLSLLAGRISQSSTGGSVTYNDKPYSKYLKSKI-GFVTQDDVLFPHLTVKETLTYAARLRLPKTLTREQKKQRALDVIQELGLERCQDTMIGGAFVRGVSGGERKRVSIGNEIIINPSLLLLDEPTSGLDSTTALRTILMLHDIAEAGKTVITTIHQPSSRLFHRFDKLILLGRGS-LLYFG 385          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB14G_ARATH (ABC transporter G family member 14 OS=Arabidopsis thaliana GN=ABCG14 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 83/237 (35.02%), Postives = 142/237 (59.92%), Query Frame = 1
Query:    1 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQ-LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 708
            ++L F+ + Y V +    +  G  + + + +L+ ++G   PG   A++G SG+GKTTL+  L GR +  +  G +  +G P +     R +G+  Q+D+  P++TV+E+L ++A LRL S +   ++   VD V+  + L    +SM+G P   G+S  ++KR++I  E++ NPS++ +DEPTSGLD+  A  ++ T++     GRTVV TIHQPS  I+  FD+++LL  G  + Y
Sbjct:   51 ITLKFEEVVYKVKIEQTSQCMGSWKSKEKTILNGITGMVCPGEFLAMLGPSGSGKTTLLSALGGRLSKTF-SGKVMYNGQPFSG-CIKRRTGFVAQDDVLYPHLTVWETLFFTALLRLPSSLTRDEKAEHVDRVIAELGLNRCTNSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAHRIVTTIKRLASGGRTVVTTIHQPSSRIYHMFDKVVLLSEGSPIYY 285          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 84/211 (39.81%), Postives = 134/211 (63.51%), Query Frame = 1
Query:   85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYI-EGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714
            +LL+ V+G   P  + A+MG SG+GK+TL+D LAGR  G  +  G + ++G  +  +  A  + Y  Q D+    +TV ES+ YSA LRL S +  ++    V+  +  + L+  +D  +G   + G+S  ++KRL+IA+E++  PS++F+DEPTSGLD+ +A  V++ +RN   +G+TVV +IHQPS ++F  FD+LLLL  GG  +Y G
Sbjct:   29 RLLNGVNGCGEPNRILAIMGPSGSGKSTLLDALAGRLAGNVVMSGKVLVNGKKRRLDFGA--AAYVTQEDVLLGTLTVRESISYSAHLRLPSKLTREEISDIVEATITDMGLEECSDRTIGNWHLRGISGGEKKRLSIALEVLTKPSLLFLDEPTSGLDSASAFFVVQILRNIASSGKTVVSSIHQPSGEVFALFDDLLLLS-GGETVYFG 236          
The following BLAST results are available for this feature:
BLAST of FC925221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 300
Match NameE-valueIdentityDescription
AB27G_ARATH2.813e-3636.02ABC transporter G family member 27 OS=Arabidopsis ... [more]
ABCG2_HUMAN3.674e-3638.86ATP-binding cassette sub-family G member 2 OS=Homo... [more]
ABCG2_BOVIN3.674e-3638.86ATP-binding cassette sub-family G member 2 OS=Bos ... [more]
AB21G_ARATH3.674e-3639.46ABC transporter G family member 21 OS=Arabidopsis ... [more]
AB10G_ARATH6.266e-3641.26ABC transporter G family member 10 OS=Arabidopsis ... [more]
ABCG2_PIG8.184e-3639.34ATP-binding cassette sub-family G member 2 OS=Sus ... [more]
ABCG2_MOUSE8.184e-3635.86ATP-binding cassette sub-family G member 2 OS=Mus ... [more]
AB22G_ARATH8.184e-3638.10ABC transporter G family member 22 OS=Arabidopsis ... [more]
AB14G_ARATH8.184e-3635.02ABC transporter G family member 14 OS=Arabidopsis ... [more]
AB13G_ARATH8.184e-3639.81ABC transporter G family member 13 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YF19FM1 TF Citrus clementina cDNA clone KN0AAP8YF19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925221 ID=FC925221; Name=FC925221; organism=Citrus clementina; type=EST; length=733bp
CTTTCACTTACATTCGACAATATGAGCTACTTCGTGGATATGCCTGCAGA
AATGAAGACTGAAGGAGTTGGAGAAGATCGTCTTCAACTGCTACACAGTG
TCAGCGGTGCATTCAGGCCAGGAATATTGACAGCATTAATGGGTGTAAGT
GGTGCGGGGAAGACAACTCTGATGGATGTATTGGCAGGAAGGAAGACCGG
AGGATATATTGAAGGGGACATTAAAATTTCTGGTTACCCCAAAAACCAAG
AAACATTTGCTCGAGTGAGTGGTTATTGTGAACAGAATGACATTCATTCA
CCCTATGTTACTGTCTATGAATCTCTCCTCTACTCAGCATGGCTTCGTCT
TTCTTCAGACGTTGATACGAAAAAAAGAAAGATGTTTGTTGATGAAGTTA
TGGAGCTTGTTGAGCTCAAATCATTGAATGATTCTATGGTTGGCCTTCCC
GGAGTAAGTGGTCTTTCGACAGAGCAAAGGAAGAGATTGACGATTGCTGT
AGAATTGGTTGCTAACCCTTCTATCATCTTCATGGATGAGCCTACATCTG
GGCTTGATGCTAGAGCTGCTGCTATTGTCATGCGTACTGTTAGAAATACA
GTGGATACAGGGAGAACAGTTGTGTGTACAATCCACCAGCCAAGCATAGA
CATTTTTGAAGCATTTGACGAGCTATTGTTGTTGAAAAGAGGGGGCCGCG
TCATTTATGCTGGACCTCTTGGTCACGAATCTC
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