FC925221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB27G_ARATH (ABC transporter G family member 27 OS=Arabidopsis thaliana GN=ABCG27 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36 Identity = 85/236 (36.02%), Postives = 142/236 (60.17%), Query Frame = 1 Query: 10 TFDNMSYFVDMPAEMKTEGV-GEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714 TF F+D+ ++ T+G+ +L+ +SG+ PG L ALMG SG+GKTTL++ L GR I G + + P ++ R+ G+ Q+D+ P++TV E+L Y+A LRL + ++++ V++ + L+ D+M+G V G+S +RKR+ I E++ NPS++ +DEPTS LD+ A +++ + G+T+V TIHQPS +F FD+L++L RG ++Y G Sbjct: 140 TFPIYLKFIDITYKVTTKGMTSSSEKSILNGISGSAYPGELLALMGPSGSGKTTLLNALGGRFNQQNIGGSVSYNDKPYSKHLKTRI-GFVTQDDVLFPHLTVKETLTYTALLRLPKTLTEQEKEQRAASVIQELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIMTNPSLLLLDEPTSSLDSTTALKIVQMLHCIAKAGKTIVTTIHQPSSRLFHRFDKLVVLSRGS-LLYFG 373
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 3.674e-36 Identity = 82/211 (38.86%), Postives = 135/211 (63.98%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717 ++L +++G +PG L A++G +G GK++L+DVLA RK + GD+ I+G P+ F SGY Q+D+ +TV E+L +SA LRL++ + ++ ++ V++ + L + DS VG + G+S +RKR +I +EL+ +PSI+F+DEPT+GLD+ A V+ ++ GRT++ +IHQP IF+ FD L LL GR+++ GP Sbjct: 62 EILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPSGLSGDVLINGAPR-PANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLATTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGRLMFHGP 269
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG2_BOVIN (ATP-binding cassette sub-family G member 2 OS=Bos taurus GN=ABCG2 PE=3 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 3.674e-36 Identity = 82/211 (38.86%), Postives = 137/211 (64.93%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717 ++L +++G +PG L A++G +G GK++L+D+LA RK + GD+ I+G P+ F SGY Q+D+ +TV E+L +SA LRL + + + ++ +++V++ + L + DS VG + G+S +RKR +IA+EL+ +PSI+F+DEPT+GLD+ A V+ ++ GRT++ +IHQP IF+ FD L LL GR+++ GP Sbjct: 61 EILANINGVMKPG-LNAILGPTGGGKSSLLDILAARKDPHGLSGDVLINGAPR-PANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTSYEKNERINKVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGRLMFHGP 268
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB21G_ARATH (ABC transporter G family member 21 OS=Arabidopsis thaliana GN=ABCG21 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.674e-36 Identity = 88/223 (39.46%), Postives = 139/223 (62.33%), Query Frame = 1 Query: 88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG--------GRVI-YAGPLGHE 729 +L VSG +PG L A++G SG+GKTTL+ LAGR G + G + +G P R +G+ Q+D+ P++TV E+L Y+A LRL ++ K++ V+ V+ + L +S++G + G+S +RKR++I E++ NPS++ +DEPTSGLD+ AA ++ T+R+ GRTVV TIHQPS ++ FD++L+L G GRV+ Y G +G++ Sbjct: 99 VLKCVSGIVKPGELLAMLGPSGSGKTTLVTALAGRLQGK-LSGTVSYNGEPFTSSV-KRKTGFVTQDDVLYPHLTVMETLTYTALLRLPKELTRKEKLEQVEMVVSDLGLTRCCNSVIGGGLIRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAARIVATLRSLARGGRTVVTTIHQPSSRLYRMFDKVLVLSEGCPIYSGDSGRVMEYFGSIGYQ 319
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.266e-36 Identity = 85/206 (41.26%), Postives = 130/206 (63.11%), Query Frame = 1 Query: 88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVE---LKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN-TVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 693 +L VS R +TA+ G SGAGKTTL+++LAG+ + G + G + ++G P + + RVSG+ Q D P++TV E+L YSA LRL + KRK +V L++ L+ + DS +G SG+S +R+R++I VELV +P++I +DEPTSGLD+ +A V+ +++ T+ G+T+V TIHQP I E D ++LL G Sbjct: 50 ILKDVSCDARSAEITAIAGPSGAGKTTLLEILAGKVSHGKVSGQVLVNGRPMDGPEYRRVSGFVPQEDALFPFLTVQETLTYSALLRLKT-----KRKDAAAKVKRLIQELGLEHVADSRIGQGSRSGISGGERRRVSIGVELVHDPNVILIDEPTSGLDSASALQVVTLLKDMTIKQGKTIVLTIHQPGFRILEQIDRIVLLSNG 250
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG2_PIG (ATP-binding cassette sub-family G member 2 OS=Sus scrofa GN=ABCG2 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36 Identity = 83/211 (39.34%), Postives = 135/211 (63.98%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717 ++L +++G +PG L A++G +G GK++L+DVLA RK + GD+ I+G P+ F SGY Q+D+ +TV E+L +SA LRL + + ++ ++ V++ + L + DS VG + G+S +RKR +IA+EL+ +PSI+F+DEPT+GLD+ A V+ ++ GRT++ +IHQP IF+ FD L LL GR+++ GP Sbjct: 62 EILTNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPHGLSGDVLINGAPR-PANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINMVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGRLMFHGP 269
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG2_MOUSE (ATP-binding cassette sub-family G member 2 OS=Mus musculus GN=Abcg2 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36 Identity = 85/237 (35.86%), Postives = 145/237 (61.18%), Query Frame = 1 Query: 7 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717 L+F +++Y V + + E ++L ++G +PG L A++G +G GK++L+DVLA RK + GD+ I+G P+ F SGY Q+D+ +TV E+L +SA LRL + + ++ ++ +++ + L+ + DS VG + G+S +RKR +I +EL+ +PSI+F+DEPT+GLD+ A V+ ++ GRT++ +IHQP IF+ FD L LL G++++ GP Sbjct: 37 LSFHHITYRVKVKSGFLVRKTVEK--EILSDINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPKGLSGDVLINGAPQPAH-FKCCSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMKNHEKNERINTIIKELGLEKVADSKVGTQFIRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGKLVFHGP 268
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB22G_ARATH (ABC transporter G family member 22 OS=Arabidopsis thaliana GN=ABCG22 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36 Identity = 80/210 (38.10%), Postives = 135/210 (64.29%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714 ++L +SG+ PG + ALMG SG+GKTTL+ +LAGR + G + + P ++ +++ G+ Q+D+ P++TV E+L Y+A LRL + +++K +V++ + L+ D+M+G V G+S +RKR++I E++ NPS++ +DEPTSGLD+ A + + + + G+TV+ TIHQPS +F FD+L+LL RG ++Y G Sbjct: 178 EILTGISGSVNPGEVLALMGPSGSGKTTLLSLLAGRISQSSTGGSVTYNDKPYSKYLKSKI-GFVTQDDVLFPHLTVKETLTYAARLRLPKTLTREQKKQRALDVIQELGLERCQDTMIGGAFVRGVSGGERKRVSIGNEIIINPSLLLLDEPTSGLDSTTALRTILMLHDIAEAGKTVITTIHQPSSRLFHRFDKLILLGRGS-LLYFG 385
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB14G_ARATH (ABC transporter G family member 14 OS=Arabidopsis thaliana GN=ABCG14 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36 Identity = 83/237 (35.02%), Postives = 142/237 (59.92%), Query Frame = 1 Query: 1 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQ-LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 708 ++L F+ + Y V + + G + + + +L+ ++G PG A++G SG+GKTTL+ L GR + + G + +G P + R +G+ Q+D+ P++TV+E+L ++A LRL S + ++ VD V+ + L +SM+G P G+S ++KR++I E++ NPS++ +DEPTSGLD+ A ++ T++ GRTVV TIHQPS I+ FD+++LL G + Y Sbjct: 51 ITLKFEEVVYKVKIEQTSQCMGSWKSKEKTILNGITGMVCPGEFLAMLGPSGSGKTTLLSALGGRLSKTF-SGKVMYNGQPFSG-CIKRRTGFVAQDDVLYPHLTVWETLFFTALLRLPSSLTRDEKAEHVDRVIAELGLNRCTNSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAHRIVTTIKRLASGGRTVVTTIHQPSSRIYHMFDKVVLLSEGSPIYY 285
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36 Identity = 84/211 (39.81%), Postives = 134/211 (63.51%), Query Frame = 1 Query: 85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYI-EGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714 +LL+ V+G P + A+MG SG+GK+TL+D LAGR G + G + ++G + + A + Y Q D+ +TV ES+ YSA LRL S + ++ V+ + + L+ +D +G + G+S ++KRL+IA+E++ PS++F+DEPTSGLD+ +A V++ +RN +G+TVV +IHQPS ++F FD+LLLL GG +Y G Sbjct: 29 RLLNGVNGCGEPNRILAIMGPSGSGKSTLLDALAGRLAGNVVMSGKVLVNGKKRRLDFGA--AAYVTQEDVLLGTLTVRESISYSAHLRLPSKLTREEISDIVEATITDMGLEECSDRTIGNWHLRGISGGEKKRLSIALEVLTKPSLLFLDEPTSGLDSASAFFVVQILRNIASSGKTVVSSIHQPSGEVFALFDDLLLLS-GGETVYFG 236 The following BLAST results are available for this feature:
BLAST of FC925221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 300
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925221 ID=FC925221; Name=FC925221; organism=Citrus clementina; type=EST; length=733bpback to top |