FC925221

Overview
NameFC925221
Unique NameFC925221
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: SCRT_DROME (Protein scarlet OS=Drosophila melanogaster GN=st PE=1 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 90/223 (40.36%), Postives = 135/223 (60.54%), Query Frame = 1
Query:   64 GVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGL-PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 726
            G G+   +++++ +GA +PG L ALMG SG+GKTTLM  LA R+  G  ++GDI I+G  +      R+SGY  Q+D+    +TV E L + A LRL   V  ++R++ + E++E   L S   + +G       LS  +RKRL  AVEL+ NP I+F DEPT+GLD+ +A  ++ T+      G T++CTIHQPS  +F+ F+ ++LL   GRV + G   H
Sbjct:   82 GSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGR-RIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLL-ADGRVAFTGSPQH 302          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AUS1_YEAST (ATP-dependent permease AUS1 OS=Saccharomyces cerevisiae GN=AUS1 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 90/214 (42.06%), Postives = 132/214 (61.68%), Query Frame = 1
Query:   85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP-KNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII-FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 720
            +L+++ SG    G LTALMG SGAGKTTL++VL+ R   G + G+I I G+P  +++ F R  G+ +Q D+H   ++V ESL  S  LR   D      + ++D V  L++L S  D +V     + L+  QRK L+I VELV  PS++ F+DEPTSGLDA AA  +++ ++     G+ + CTIHQPS  +   FD + LLKRGG  ++ GP+
Sbjct:  764 KLINNASGFISSG-LTALMGESGAGKTTLLNVLSQRVETGVVSGEILIDGHPLTDEDAFKRSIGFVQQQDLHLDLLSVKESLEISCLLRGDGD------RAYLDTVSNLLKLPS--DILV-----ADLNPTQRKLLSIGVELVTKPSLLLFLDEPTSGLDAEAALTIVKFLKQLSLQGQAIFCTIHQPSKSVISHFDNIFLLKRGGECVFFGPM 963          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG2_RAT (ATP-binding cassette sub-family G member 2 OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 86/237 (36.29%), Postives = 143/237 (60.34%), Query Frame = 1
Query:    7 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717
            L+F +++Y V + +        E   ++L  ++G  +PG L A++G +G GK++L+DVLA RK    + GD+ I+G P+    F   SGY  Q+D+    +TV E+L +SA LRL   + T ++   ++ +++ + L  + DS VG     G+S  +RKR +I +EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L LL   G++++ GP
Sbjct:   37 LSFHHITYRVKVKSGFLVRKTAEK--EILSDINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPRGLSGDVLINGAPQ-PANFKCSSGYVVQDDVVMGTLTVRENLQFSAALRLPKAMKTHEKNERINTIIKELGLDKVADSKVGTQFTRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGKLMFHGP 268          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCGC_DICDI (ABC transporter G family member 12 OS=Dictyostelium discoideum GN=abcG12 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.381e-35
Identity = 88/219 (40.18%), Postives = 140/219 (63.93%), Query Frame = 1
Query:   73 EDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVG--LPG---VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714
            E  L +L++VSG    G L ALMG SG+GK+TL+D+LA RK+ G I G + ++G  +  E + +   Y  Q D+     TV+E+L + A L+L    + +K K  V++++E + L     S +G  LPG   + GLS  +++R++I   LV NPS+IF+DEPTSGLD+ AA  +M+T+ N    G TV+C+IHQP  +IF  F++++++ + G++IY+G
Sbjct:   68 EKELTILNNVSGVIEKGELVALMGPSGSGKSTLLDILAQRKSTGKITGQLLVNG-KEIGEAYKKYCSYVTQEDVLLQTSTVFETLKFYADLKLPGVSEIEKIKR-VEQIIEDIGLTKRTHSKIGGVLPGGILMKGLSGGEKRRVSIGCGLVTNPSLIFLDEPTSGLDSVAALQIMKTLLNLTLKGVTVICSIHQPRPEIFALFNKVMVIIK-GKMIYSG 283          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: WHT1_CAEEL (ABC transporter ATP-binding protein/permease wht-1 OS=Caenorhabditis elegans GN=wht-1 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 4.062e-35
Identity = 86/214 (40.19%), Postives = 131/214 (61.21%), Query Frame = 1
Query:   85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRK-TGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDV-DTKKRKMFVDEVMELVELKSLNDSMVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717
            ++LH+VSG    G L A++G SGAGKTTLM+VL  R  T   ++G I I G   N+     +S + +Q+D+    +T  E L + A LR+        +R++ V++V+  + LK   D+++G+P  + GLS  ++KRL+ A E++  P I+F DEPTSGLDA  A  V++ +R+  D G TV+ TIHQPS  ++  F+ + L+   GRVIY GP
Sbjct:    8 EILHNVSGMAESGKLLAILGSSGAGKTTLMNVLTSRNLTNLDVQGSILIDGRRANKWKIREMSAFVQQHDMFVGTMTAREHLQFMARLRMGDQYYSDHERQLRVEQVLTQMGLKKCADTVIGIPNQLKGLSCGEKKRLSFASEILTCPKILFCDEPTSGLDAFMAGHVVQALRSLADNGMTVIITIHQPSSHVYSLFNNVCLM-ACGRVIYLGP 220          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG2_MACMU (ATP-binding cassette sub-family G member 2 OS=Macaca mulatta GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.062e-35
Identity = 87/237 (36.71%), Postives = 143/237 (60.34%), Query Frame = 1
Query:    7 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717
            L+F N+ Y V + +     G      ++L +++G  +PG L A++G +G GK++L+DVLA RK    + GD+ I+G  +    F   SGY  Q+D+    +TV E+L +SA LRL + +   ++   ++ V++ + L  + DS VG   + G+S  +RKR +I +EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L LL   GR+++ GP
Sbjct:   37 LSFHNICYRVKVKSGF-LPGRKPVEKEILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPSGLSGDVLINGALR-PTNFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL-ASGRLMFHGP 269          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB20G_ARATH (ABC transporter G family member 20 OS=Arabidopsis thaliana GN=ABCG20 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.305e-35
Identity = 76/210 (36.19%), Postives = 129/210 (61.43%), Query Frame = 1
Query:   88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717
            LL+ +SG  R G + A++G SG+GK+TL+D LA R +   + GDI ++G          +S Y  Q+D+  P +TV E+L++SA  RL S +  KK+K  V  +++ + L++   +++G  G  G+S  +R+R++I  +++ +P I+F+DEPTSGLD+ +A +V++ ++    +G  V+ +IHQPS  I    D+L+ L RG  V    P
Sbjct:  126 LLNGISGEAREGEMMAVLGASGSGKSTLIDALANRISKESLRGDITLNGEVLESSLHKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPSSLSKKKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDKLIFLSRGNTVYSGSP 335          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: PDR11_YEAST (ATP-dependent permease PDR11 OS=Saccharomyces cerevisiae GN=PDR11 PE=1 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 6.928e-35
Identity = 92/214 (42.99%), Postives = 125/214 (58.41%), Query Frame = 1
Query:   85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP-KNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII-FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 720
            +L++  SG    G LTALMG SGAGKTTL++VL+ R   G + G++ I G P  N + F R  G+ +Q D+H   +TV ESL  S  LR   D D      ++  V  L+ L S          V+ LS  QRK L+I VELV  PS++ F+DEPTSGLDA AA  +++ ++     G+ ++CTIHQPS  +   FD + LLKRGG  +Y G L
Sbjct:  764 KLINDASGYISSG-LTALMGESGAGKTTLLNVLSQRTESGVVTGELLIDGQPLTNIDAFRRSIGFVQQQDVHLELLTVRESLEISCVLRGDGDRD------YLGVVSNLLRLPSEKL-------VADLSPTQRKLLSIGVELVTKPSLLLFLDEPTSGLDAEAALTIVQFLKKLSMQGQAILCTIHQPSKSVISYFDNIYLLKRGGECVYFGSL 963          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB6G_ARATH (ABC transporter G family member 6 OS=Arabidopsis thaliana GN=ABCG6 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.049e-35
Identity = 72/221 (32.58%), Postives = 136/221 (61.54%), Query Frame = 1
Query:   58 TEGVGEDRLQ-LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717
            +EG+   + + LL+ ++G  R G + A++G SG+GK+TL+D LA R   G ++G++ ++G   N +    +S Y  Q+D+  P +TV E+L+++A  RL   +   K+ + V  +++ + L++  ++++G  G  G+S  +R+R++I ++++ +P ++F+DEPTSGLD+ +A  V++ ++    +G  V+ T+HQPS  +    D LL L RG  V    P
Sbjct:   97 SEGIFSSKTKTLLNGITGEARDGEILAVLGASGSGKSTLIDALANRIAKGSLKGNVTLNGEVLNSKMQKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLSKSKKSLRVQALIDQLGLRNAANTVIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSALSVIKVLKRIAQSGSMVIMTLHQPSYRLLRLLDRLLFLSRGQTVFSGSP 317          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB1G_ARATH (ABC transporter G family member 1 OS=Arabidopsis thaliana GN=ABCG1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.543e-34
Identity = 77/251 (30.68%), Postives = 146/251 (58.17%), Query Frame = 1
Query:    7 LTFDNMSYFVDMPAEMKTEGVGEDRLQ---------------LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714
            L+FDN++Y V +  ++    +   R                 LL+++SG  R G + A++G SG+GK+TL+D LA R   G ++G +K++G          +S Y  Q+D+  P +TV E+L+++A  RL   +   K+K+ V  +++ + +++   +++G  G  G+S  +R+R++I ++++ +P ++F+DEPTSGLD+ +A +V++ ++    +G  V+ +IHQPS  +    D L+ L R G  +Y+G
Sbjct:   67 LSFDNLTYNVSVRPKLDFRNLFPRRRTEDPEIAQTARPKTKTLLNNISGETRDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLKRIAQSGSIVIMSIHQPSHRVLGLLDRLIFLSR-GHTVYSG 316          
The following BLAST results are available for this feature:
BLAST of FC925221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 300
Match NameE-valueIdentityDescription
SCRT_DROME1.069e-3540.36Protein scarlet OS=Drosophila melanogaster GN=st P... [more]
AUS1_YEAST1.069e-3542.06ATP-dependent permease AUS1 OS=Saccharomyces cerev... [more]
ABCG2_RAT1.069e-3536.29ATP-binding cassette sub-family G member 2 OS=Ratt... [more]
ABCGC_DICDI2.381e-3540.18ABC transporter G family member 12 OS=Dictyosteliu... [more]
WHT1_CAEEL4.062e-3540.19ABC transporter ATP-binding protein/permease wht-1... [more]
ABCG2_MACMU4.062e-3536.71ATP-binding cassette sub-family G member 2 OS=Maca... [more]
AB20G_ARATH5.305e-3536.19ABC transporter G family member 20 OS=Arabidopsis ... [more]
PDR11_YEAST6.928e-3542.99ATP-dependent permease PDR11 OS=Saccharomyces cere... [more]
AB6G_ARATH9.049e-3532.58ABC transporter G family member 6 OS=Arabidopsis t... [more]
AB1G_ARATH1.543e-3430.68ABC transporter G family member 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YF19FM1 TF Citrus clementina cDNA clone KN0AAP8YF19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925221 ID=FC925221; Name=FC925221; organism=Citrus clementina; type=EST; length=733bp
CTTTCACTTACATTCGACAATATGAGCTACTTCGTGGATATGCCTGCAGA
AATGAAGACTGAAGGAGTTGGAGAAGATCGTCTTCAACTGCTACACAGTG
TCAGCGGTGCATTCAGGCCAGGAATATTGACAGCATTAATGGGTGTAAGT
GGTGCGGGGAAGACAACTCTGATGGATGTATTGGCAGGAAGGAAGACCGG
AGGATATATTGAAGGGGACATTAAAATTTCTGGTTACCCCAAAAACCAAG
AAACATTTGCTCGAGTGAGTGGTTATTGTGAACAGAATGACATTCATTCA
CCCTATGTTACTGTCTATGAATCTCTCCTCTACTCAGCATGGCTTCGTCT
TTCTTCAGACGTTGATACGAAAAAAAGAAAGATGTTTGTTGATGAAGTTA
TGGAGCTTGTTGAGCTCAAATCATTGAATGATTCTATGGTTGGCCTTCCC
GGAGTAAGTGGTCTTTCGACAGAGCAAAGGAAGAGATTGACGATTGCTGT
AGAATTGGTTGCTAACCCTTCTATCATCTTCATGGATGAGCCTACATCTG
GGCTTGATGCTAGAGCTGCTGCTATTGTCATGCGTACTGTTAGAAATACA
GTGGATACAGGGAGAACAGTTGTGTGTACAATCCACCAGCCAAGCATAGA
CATTTTTGAAGCATTTGACGAGCTATTGTTGTTGAAAAGAGGGGGCCGCG
TCATTTATGCTGGACCTCTTGGTCACGAATCTC
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