FC925221

Overview
NameFC925221
Unique NameFC925221
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.439e-34
Identity = 74/244 (30.33%), Postives = 143/244 (58.61%), Query Frame = 1
Query:    7 LTFDNMSYFVDMPAEMKTEGVGEDRLQ-------LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717
            L+F+N++Y V +  ++    +   R         LL ++SG  R G + A++G SG+GK+TL+D LA R   G ++G + ++G          +S Y  Q+D+  P +TV E+L+++A  RL   +   K+K+ V  +++ + +++   +++G  G  G+S  +R+R++I ++++ +P ++F+DEPTSGLD+ +A +V++ ++   ++G  ++ +IHQPS  +    D L+ L RG  V    P
Sbjct:   73 LSFNNLTYNVSVRRKLDFHDLVPWRRTSFSKTKTLLDNISGETRDGEILAVLGASGSGKSTLIDALANRIAKGSLKGTVTLNGEALQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLKRIAESGSIIIMSIHQPSHRVLSLLDRLIFLSRGHTVFSGSP 316          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB19G_ARATH (ABC transporter G family member 19 OS=Arabidopsis thaliana GN=ABCG19 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.865e-34
Identity = 81/241 (33.61%), Postives = 140/241 (58.09%), Query Frame = 1
Query:    7 LTFDNMSYFVDMPAEM---KTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARV-SGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717
            L F+N+ Y V +       +  GV      LL  VSG    G + A++G SGAGK+TL+D LAGR   G + G + ++G    Q    +V S Y  Q+D+  P +TV E+L++++  RL   +   K+   V+ +++ + L++  ++++G  G  G+S  +R+R++I ++++ +P ++F+DEPTSGLD+  A +V++ ++    +G  V+ +IHQPS  I E  D L++L RG  V    P
Sbjct:   73 LNFNNLQYDVTLRRRFGFSRQNGVKT----LLDDVSGEASDGDILAVLGASGAGKSTLIDALAGRVAEGSLRGSVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLSKSKKMERVEALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTNAFMVVQVLKRIAQSGSIVIMSIHQPSARIVELLDRLIILSRGKSVFNGSP 309          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: WHITE_ANOGA (Protein white OS=Anopheles gambiae GN=w PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.660e-34
Identity = 86/221 (38.91%), Postives = 128/221 (57.92%), Query Frame = 1
Query:   79 RLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKIS--------GYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714
            R  LL +V+G  + G L A+MG SGAGKTTL++ LA R   G     +KIS        G P N E       Y +Q+D+  P +T  E LL+ A LR+  DV    ++  V EV++ + L    D+++G PG + GLS  +RKRL  A E + +P ++  DEPTSGLD+  A  V++ ++     G+T++ TIHQPS +++  FD++LL+   GRV + G
Sbjct:  112 RKHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPG-----VKISPNAVRALNGVPVNAEQLRARCAYVQQDDLFIPSLTTREHLLFQAMLRMGRDVPASVKQHRVQEVLQELSLVKCADTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMAHSVLQVLKGMAMKGKTIILTIHQPSSELYCLFDKILLVAE-GRVAFLG 326          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.229e-33
Identity = 79/209 (37.80%), Postives = 128/209 (61.24%), Query Frame = 1
Query:   85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYI-EGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 708
            +LL  ++G   PG + A+MG SG+GK+TL+D LAGR     +  G++ ++G  K       +  Y  Q D+    +TV E++ YSA LRL SD+  ++    V+  +  + L+  +D ++G     G+S  +RKR++IA+E++  P I+F+DEPTSGLD+ +A  V++ +RN    GRTV+ ++HQPS ++F  FD+L LL  G  V +
Sbjct:   44 RLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVVMTGNLLLNG--KKARLDYGLVAYVTQEDVLLGTLTVRETITYSAHLRLPSDMSKEEVSDIVEGTIMELGLQDCSDRVIGNWHARGVSGGERKRVSIALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARDGRTVISSVHQPSSEVFALFDDLFLLSSGESVYF 250          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.229e-33
Identity = 83/222 (37.39%), Postives = 138/222 (62.16%), Query Frame = 1
Query:   52 MKTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGR-KTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714
            M T G GE +  +L  ++G   PG LTALMG SG+GK+T++D LA R     ++ G + ++G  K + +F   + Y  Q+D     +TV E++ YSA +RL   +   +++  V+  +  + L+   D+++G   + G+S  +++R++IA+E++  P ++F+DEPTSGLD+ +A  V +T+R     GRTV+ +IHQPS ++FE FD L LL  GG+ +Y G
Sbjct:   58 MVTMGDGETQ-NVLEGLTGYAEPGSLTALMGPSGSGKSTMLDALASRLAANAFLSGTVLLNGR-KTKLSFG-TAAYVTQDDNLIGTLTVRETIWYSARVRLPDKMLRSEKRALVERTIIEMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALSRDGRTVIASIHQPSSEVFELFDRLYLLS-GGKTVYFG 275          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: WHITE_LUCCU (Protein white OS=Lucilia cuprina GN=W PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.911e-33
Identity = 81/220 (36.82%), Postives = 131/220 (59.55%), Query Frame = 1
Query:   67 VGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKI---SGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714
            + + R  L+ +V G   PG L A+MG SGAGKTTL++ LA R   G       +   +G+P + +       Y +Q+D+    +T  E L++ A +R+   +  K++   VD+V++ + L    ++++G+PG V GLS  +RKRL  A E + +P ++  DEPTSGLD+  AA V++ ++     G+TV+ TIHQPS ++FE FD++LL+   GRV + G
Sbjct:   94 IPKPRKHLIKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSARGVQISPSSVRMLNGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQATVRMPRTMTQKQKLQRVDQVIQDLSLIKCQNTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFMAASVVQVLKKLSQRGKTVILTIHQPSSELFELFDKILLMAE-GRVAFLG 312          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB2G_ARATH (ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.911e-33
Identity = 74/210 (35.24%), Postives = 126/210 (60.00%), Query Frame = 1
Query:   88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717
            LL+ +SG  R G + A++G SG+GK+TL+D LA R     + G I ++G          +S Y  Q+D+  P +TV E+L++SA  RL   +  KK+K  V  +++ + L+S   +++G  G  G+S  +R+R++I  +++ +P I+F+DEPTSGLD+ +A +V++ ++    +G  V+ +IHQPS  I    D+L+ L +G  V    P
Sbjct:  133 LLNGISGEAREGEMMAVLGASGSGKSTLIDALANRIAKDSLRGSITLNGEVLESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKKKKKARVQALIDQLGLRSAAKTVIGDEGHRGVSGGERRRVSIGNDIIHDPIILFLDEPTSGLDSTSAYMVIKVLQRIAQSGSIVIMSIHQPSYRIMGLLDQLIFLSKGNTVYSGSP 342          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG7_DICDI (ABC transporter G family member 7 OS=Dictyostelium discoideum GN=abcG7 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.802e-33
Identity = 89/225 (39.56%), Postives = 138/225 (61.33%), Query Frame = 1
Query:   58 TEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVG--LPG---VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN-TVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714
            T G  E  + +L +VSG      +  L G SG+GK+TL+D+LA RK+ G I G I ++G  +  + + +   Y  Q++I     TV E+L + A LRL    D  K K+ V++V++ + L   + S +G  LPG   V GLS  ++KR++I   LV NPS++F+DEPTSGLD+  A  VM+ + N TV  G TV+C+IHQP  +I+  F++++++ + GR+IY G
Sbjct:  246 TNGKIEKEITILSNVSGIIEKSEMVGLFGPSGSGKSTLLDILANRKSTGTISGKILVNG-KEIGDAYKKYCSYVTQDEILLQTSTVEETLKFHADLRLPGLSDQDKWKV-VEQVIKDIGLTKKSKSKIGGILPGGMIVKGLSGGEKKRVSIGCALVTNPSLLFLDEPTSGLDSLNALKVMKVLMNLTVIKGVTVICSIHQPRPEIYHLFNKIMIMLK-GRMIYCG 467          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: ABCG4_DICDI (ABC transporter G family member 4 OS=Dictyostelium discoideum GN=abcG4 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.802e-33
Identity = 89/220 (40.45%), Postives = 135/220 (61.36%), Query Frame = 1
Query:   73 EDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVG--LPG---VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN-TVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 714
            E  L +L +VSG    G + ALMG SG+GK+TL+D+LA RK+ G I G I ++G  +  E +     Y  Q ++     TVYE+L + A LRL    DT+K  + + +V++ V L    +S +G  LPG   V GLS  ++KR++I   LV NPS++F+DEPTSGLD+  +  VM+ +   T   G TVVC++HQP  +IF  F  ++++ + GR++Y+G
Sbjct:  230 EKELTILSNVSGIVEKGEMVALMGPSGSGKSTLLDILANRKSTGTITGKILVNG-KEIGEAYKMFCSYVTQEEVFLETSTVYETLKFHADLRLPDMTDTEK-DIRIKQVLKDVGLDRKLNSKIGGILPGGMIVKGLSGGEKKRVSIGCALVTNPSLLFLDEPTSGLDSLNSLKVMKVLLELTKMKGVTVVCSVHQPRPEIFYLFSNIMVVLK-GRMVYSG 446          
BLAST of FC925221 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33
Identity = 84/210 (40.00%), Postives = 129/210 (61.43%), Query Frame = 1
Query:   85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYI-EGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 708
            +LL  ++G   PG + A+MG SG+GK+TL+D LAGR     I  G++ ++G  K       +  Y  Q DI    +TV E++ YSA LRLSSD+  ++    V+  +  + L+   D ++G     G+S  +RKR+++A+E++  P I+F+DEPTSGLD+ +A  V++ +RN   D GRTVV +IHQPS ++F  FD+L LL  G  V +
Sbjct:   43 RLLDGLNGHAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVIMTGNLLLNG--KKARLDYGLVAYVTQEDILMGTLTVRETITYSAHLRLSSDLTKEEVNDIVEGTIIELGLQDCADRVIGNWHSRGVSGGERKRVSVALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARDGGRTVVSSIHQPSSEVFALFDDLFLLSSGETVYF 250          
The following BLAST results are available for this feature:
BLAST of FC925221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 300
Match NameE-valueIdentityDescription
AB16G_ARATH3.439e-3430.33ABC transporter G family member 16 OS=Arabidopsis ... [more]
AB19G_ARATH5.865e-3433.61ABC transporter G family member 19 OS=Arabidopsis ... [more]
WHITE_ANOGA7.660e-3438.91Protein white OS=Anopheles gambiae GN=w PE=2 SV=1[more]
AB15G_ARATH2.229e-3337.80ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB11G_ARATH2.229e-3337.39ABC transporter G family member 11 OS=Arabidopsis ... [more]
WHITE_LUCCU2.911e-3336.82Protein white OS=Lucilia cuprina GN=W PE=2 SV=2[more]
AB2G_ARATH2.911e-3335.24ABC transporter G family member 2 OS=Arabidopsis t... [more]
ABCG7_DICDI3.802e-3339.56ABC transporter G family member 7 OS=Dictyostelium... [more]
ABCG4_DICDI3.802e-3340.45ABC transporter G family member 4 OS=Dictyostelium... [more]
AB12G_ARATH4.965e-3340.00ABC transporter G family member 12 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YF19FM1 TF Citrus clementina cDNA clone KN0AAP8YF19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925221 ID=FC925221; Name=FC925221; organism=Citrus clementina; type=EST; length=733bp
CTTTCACTTACATTCGACAATATGAGCTACTTCGTGGATATGCCTGCAGA
AATGAAGACTGAAGGAGTTGGAGAAGATCGTCTTCAACTGCTACACAGTG
TCAGCGGTGCATTCAGGCCAGGAATATTGACAGCATTAATGGGTGTAAGT
GGTGCGGGGAAGACAACTCTGATGGATGTATTGGCAGGAAGGAAGACCGG
AGGATATATTGAAGGGGACATTAAAATTTCTGGTTACCCCAAAAACCAAG
AAACATTTGCTCGAGTGAGTGGTTATTGTGAACAGAATGACATTCATTCA
CCCTATGTTACTGTCTATGAATCTCTCCTCTACTCAGCATGGCTTCGTCT
TTCTTCAGACGTTGATACGAAAAAAAGAAAGATGTTTGTTGATGAAGTTA
TGGAGCTTGTTGAGCTCAAATCATTGAATGATTCTATGGTTGGCCTTCCC
GGAGTAAGTGGTCTTTCGACAGAGCAAAGGAAGAGATTGACGATTGCTGT
AGAATTGGTTGCTAACCCTTCTATCATCTTCATGGATGAGCCTACATCTG
GGCTTGATGCTAGAGCTGCTGCTATTGTCATGCGTACTGTTAGAAATACA
GTGGATACAGGGAGAACAGTTGTGTGTACAATCCACCAGCCAAGCATAGA
CATTTTTGAAGCATTTGACGAGCTATTGTTGTTGAAAAGAGGGGGCCGCG
TCATTTATGCTGGACCTCTTGGTCACGAATCTC
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