FC925225
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MY114_ARATH (Transcription factor MYB114 OS=Arabidopsis thaliana GN=MYB114 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.000e-14 Identity = 45/112 (40.18%), Postives = 56/112 (50.00%), Query Frame = 3
Query: 222 EEDQQELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557
E + LR+G WT EED+LL I ++GEG+W+ V + +GL R KSCRLRWLNYLKP IKRG + E L+L LH GNR
Sbjct: 2 EGSSKGLRKGAWTAEEDSLLRQCIGKYGEGKWHQVP-----------------------------LRAGLNRCRKSCRLRWLNYLKPSIKRGKFSSDEVDLLLRLHKLLGNR 84
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.424e-14 Identity = 42/110 (38.18%), Postives = 56/110 (50.91%), Query Frame = 3
Query: 228 DQQELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557
D+ +++GPW+ EED L YI G G GN I L K+ GLKR GKSCRLRWLNYL+P+IK G + +E+ +I L+ G+R
Sbjct: 8 DKANVKKGPWSPEEDAKLKSYIENSGTG---------GNWI-------------ALPQKI------GLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSR 89 HSP 2 Score: 30.0314 bits (66), Expect = 6.424e-14 Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = 1
Query: 667 RWSKIAQCLPGRTDNEI 717
RWS IA LPGRTDN+I
Sbjct: 89 RWSIIAAQLPGRTDNDI 105
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYBA_XENLA (Myb-related protein A OS=Xenopus laevis GN=mybl1 PE=2 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 3.015e-13 Identity = 33/107 (30.84%), Postives = 49/107 (45.79%), Query Frame = 3
Query: 237 ELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557
EL +GPWT EED + +H++G +W+++AK R GK CR RW N+L PD+K+ + T +E +I H + GNR
Sbjct: 83 ELVKGPWTKEEDQRVIELVHKYGPKKWSIIAKHLKG------------------------------RIGKQCRERWHNHLNPDVKKSSWTEEEDRIIYSAHKRMGNR 159 HSP 2 Score: 31.5722 bits (70), Expect = 3.015e-13 Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = 1
Query: 655 IGNFRWSKIAQCLPGRTDNEI 717
+GN RW++IA+ LPGRTDN I
Sbjct: 156 MGN-RWAEIAKLLPGRTDNSI 175
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYB_XENLA (Myb protein OS=Xenopus laevis GN=myb PE=2 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 3.026e-13 Identity = 34/107 (31.78%), Postives = 49/107 (45.79%), Query Frame = 3
Query: 237 ELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557
EL +GPWT EED + +H++G RW+++AK R GK CR RW N+L P++K+ + T +E I E H + GNR
Sbjct: 86 ELIKGPWTKEEDQRVIELVHKYGPKRWSVIAKHLKG------------------------------RIGKQCRERWHNHLNPEVKKSSWTEEEDRTIYEAHKRLGNR 162 HSP 2 Score: 31.5722 bits (70), Expect = 3.026e-13 Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = 1
Query: 655 IGNFRWSKIAQCLPGRTDNEI 717
+GN RW++IA+ LPGRTDN I
Sbjct: 159 LGN-RWAEIAKLLPGRTDNAI 178
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.091e-13 Identity = 42/110 (38.18%), Postives = 57/110 (51.82%), Query Frame = 3
Query: 228 DQQELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557
D+ ++RGPW+ EED L YI + G G GN I L K +GL+R GKSCRLRWLNYL+P+I+ G+ T +E +I L + G+R
Sbjct: 8 DKANVKRGPWSPEEDAKLKDYIEKQGTG---------GNWI-------------ALPHK------AGLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSR 89 HSP 2 Score: 27.335 bits (59), Expect = 3.091e-13 Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 1
Query: 667 RWSKIAQCLPGRTDNEI 717
RWS IA L GRTDN+I
Sbjct: 89 RWSVIAAHLQGRTDNDI 105
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYBA_MOUSE (Myb-related protein A OS=Mus musculus GN=Mybl1 PE=2 SV=2) HSP 1 Score: 62.7734 bits (151), Expect = 6.598e-13 Identity = 33/107 (30.84%), Postives = 49/107 (45.79%), Query Frame = 3
Query: 237 ELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557
EL +GPWT EED + + ++G RW+++AK R GK CR RW N+L P++K+ + T +E +I E H + GNR
Sbjct: 84 ELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG------------------------------RIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNR 160 HSP 2 Score: 31.9574 bits (71), Expect = 6.598e-13 Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = 1
Query: 655 IGNFRWSKIAQCLPGRTDNEI 717
+GN RW++IA+ LPGRTDN I
Sbjct: 157 LGN-RWAEIAKLLPGRTDNSI 176
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYBA_HUMAN (Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=1 SV=2) HSP 1 Score: 62.7734 bits (151), Expect = 6.598e-13 Identity = 33/107 (30.84%), Postives = 49/107 (45.79%), Query Frame = 3
Query: 237 ELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557
EL +GPWT EED + + ++G RW+++AK R GK CR RW N+L P++K+ + T +E +I E H + GNR
Sbjct: 84 ELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG------------------------------RIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNR 160 HSP 2 Score: 31.9574 bits (71), Expect = 6.598e-13 Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = 1
Query: 655 IGNFRWSKIAQCLPGRTDNEI 717
+GN RW++IA+ LPGRTDN I
Sbjct: 157 LGN-RWAEIAKLLPGRTDNSI 176
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYBA_CHICK (Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 1.876e-12 Identity = 33/107 (30.84%), Postives = 48/107 (44.86%), Query Frame = 3
Query: 237 ELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557
EL +GPWT EED + + ++G RW+++AK R GK CR RW N+L P++K+ + T E +I E H + GNR
Sbjct: 84 ELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG------------------------------RIGKQCRERWHNHLNPEVKKSSWTEAEDRVIYEAHKRLGNR 160 HSP 2 Score: 31.9574 bits (71), Expect = 1.876e-12 Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = 1
Query: 655 IGNFRWSKIAQCLPGRTDNEI 717
+GN RW++IA+ LPGRTDN I
Sbjct: 157 LGN-RWAEIAKLLPGRTDNSI 176
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYB_AVIMB (Transforming protein Myb OS=Avian myeloblastosis virus GN=V-MYB PE=1 SV=2) HSP 1 Score: 61.2326 bits (147), Expect = 3.223e-12 Identity = 32/107 (29.91%), Postives = 49/107 (45.79%), Query Frame = 3
Query: 237 ELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557
EL +GPWT EED + ++ ++G RW+ +AK R GK CR RW N+L P++K+ + T +E +I + H + GNR
Sbjct: 18 ELNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKHLKG------------------------------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNR 94 HSP 2 Score: 31.187 bits (69), Expect = 3.223e-12 Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 1
Query: 655 IGNFRWSKIAQCLPGRTDNEI 717
+GN RW++IA+ LPGRTDN +
Sbjct: 91 LGN-RWAEIAKLLPGRTDNAV 110
BLAST of FC925225 vs. ExPASy Swiss-Prot
Match: MYB_HUMAN (Myb proto-oncogene protein OS=Homo sapiens GN=MYB PE=1 SV=2) HSP 1 Score: 60.4622 bits (145), Expect = 4.124e-12 Identity = 32/107 (29.91%), Postives = 49/107 (45.79%), Query Frame = 3
Query: 237 ELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 557
EL +GPWT EED + + ++G RW+++AK R GK CR RW N+L P++K+ + T +E +I + H + GNR
Sbjct: 89 ELIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKG------------------------------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNR 165 HSP 2 Score: 31.5722 bits (70), Expect = 4.124e-12 Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = 1
Query: 655 IGNFRWSKIAQCLPGRTDNEI 717
+GN RW++IA+ LPGRTDN I
Sbjct: 162 LGN-RWAEIAKLLPGRTDNAI 181 The following BLAST results are available for this feature:
BLAST of FC925225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925225 ID=FC925225; Name=FC925225; organism=Citrus clementina; type=EST; length=719bpback to top |