FC925228

Overview
NameFC925228
Unique NameFC925228
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length749
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925228 vs. ExPASy Swiss-Prot
Match: SPK1_CAEBR (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis briggsae GN=spk-1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.176e-15
Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 1
Query:  475 DVQCKLVDFGNACWTHKQFTNDIQTRQYRCPEVLLGSKYSTSADLWSFACICFELATGSL----GTDDGASRDD 684
            D+  K+ D GNACW +  +T+DIQTRQYR  EVL+GS Y   AD+WS AC+ FELATG         D  SRD+
Sbjct:  520 DIDVKIADLGNACWVNHHYTDDIQTRQYRALEVLIGSGYGPPADIWSTACMAFELATGDYLFEPHQGDNYSRDE 593          
BLAST of FC925228 vs. ExPASy Swiss-Prot
Match: DYRK3_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Homo sapiens GN=DYRK3 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 6.055e-15
Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 1
Query:  487 KLVDFGNACWTHKQFTNDIQTRQYRCPEVLLGSKYSTSADLWSFACICFELATGS---LGTDDG 669
            K++DFG++C+ +++    IQ+R YR PE++LGS+YST  D+WSF CI  EL TG     G D+G
Sbjct:  352 KVIDFGSSCFEYQKLYTYIQSRFYRAPEIILGSRYSTPIDIWSFGCILAELLTGQPLFPGEDEG 415          

HSP 2 Score: 30.4166 bits (67), Expect = 6.055e-15
Identity = 15/32 (46.88%), Postives = 19/32 (59.38%), Query Frame = 2
Query:  647 DHLALMMELLGMMPRKIALGGRYSRDFFNRHG 742
            D LA MMELLGM P K+    + ++ F N  G
Sbjct:  416 DQLACMMELLGMPPPKLLEQSKRAKYFINSKG 447          
BLAST of FC925228 vs. ExPASy Swiss-Prot
Match: DYRK3_MACFA (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Macaca fascicularis GN=DYRK3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.060e-15
Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 1
Query:  487 KLVDFGNACWTHKQFTNDIQTRQYRCPEVLLGSKYSTSADLWSFACICFELATGS---LGTDDG 669
            K++DFG++C+ +++    IQ+R YR PE++LGS+YST  D+WSF CI  EL TG     G D+G
Sbjct:  332 KVIDFGSSCFEYQKLYTYIQSRFYRAPEIILGSRYSTPIDIWSFGCILAELLTGQPLFPGEDEG 395          

HSP 2 Score: 30.4166 bits (67), Expect = 6.060e-15
Identity = 15/32 (46.88%), Postives = 19/32 (59.38%), Query Frame = 2
Query:  647 DHLALMMELLGMMPRKIALGGRYSRDFFNRHG 742
            D LA MMELLGM P K+    + ++ F N  G
Sbjct:  396 DQLACMMELLGMPPPKLLEQSKRAKYFINSKG 427          
BLAST of FC925228 vs. ExPASy Swiss-Prot
Match: DYRK3_RAT (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Rattus norvegicus GN=Dyrk3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.022e-14
Identity = 30/64 (46.88%), Postives = 44/64 (68.75%), Query Frame = 1
Query:  487 KLVDFGNACWTHKQFTNDIQTRQYRCPEVLLGSKYSTSADLWSFACICFELATGS---LGTDDG 669
            K++DFG++C+ +++    IQ+R YR PE++LG +YST  D+WSF CI  EL TG     G D+G
Sbjct:  351 KVIDFGSSCFEYQKLYTYIQSRFYRAPEIILGCRYSTPIDIWSFGCILAELLTGQPLFPGEDEG 414          

HSP 2 Score: 31.5722 bits (70), Expect = 1.022e-14
Identity = 15/32 (46.88%), Postives = 20/32 (62.50%), Query Frame = 2
Query:  647 DHLALMMELLGMMPRKIALGGRYSRDFFNRHG 742
            D LA MMELLGM P+K+    + ++ F N  G
Sbjct:  415 DQLACMMELLGMPPQKLLEQSKRAKYFINSKG 446          
BLAST of FC925228 vs. ExPASy Swiss-Prot
Match: SKY1_YEAST (Serine/threonine-protein kinase SKY1 OS=Saccharomyces cerevisiae GN=SKY1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.411e-14
Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = 1
Query:  478 VQCKLVDFGNACWTHKQFTNDIQTRQYRCPEVLLGSKYSTSADLWSFACICFELATGS--LGTDDGAS--RDD 684
            +Q K+ D GNACW  + +TN IQTR+YR PEVLLG+ +   AD+WS AC+ FEL TG      D+G S  +DD
Sbjct:  544 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 616          
BLAST of FC925228 vs. ExPASy Swiss-Prot
Match: DYRK3_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Mus musculus GN=Dyrk3 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.913e-14
Identity = 30/64 (46.88%), Postives = 44/64 (68.75%), Query Frame = 1
Query:  487 KLVDFGNACWTHKQFTNDIQTRQYRCPEVLLGSKYSTSADLWSFACICFELATGS---LGTDDG 669
            K++DFG++C+ +++    IQ+R YR PE++LG +YST  D+WSF CI  EL TG     G D+G
Sbjct:  351 KVIDFGSSCFEYQKLYTYIQSRFYRAPEIILGCRYSTPIDIWSFGCILAELLTGQPLFPGEDEG 414          

HSP 2 Score: 30.0314 bits (66), Expect = 2.913e-14
Identity = 14/32 (43.75%), Postives = 20/32 (62.50%), Query Frame = 2
Query:  647 DHLALMMELLGMMPRKIALGGRYSRDFFNRHG 742
            D LA M+ELLGM P+K+    + ++ F N  G
Sbjct:  415 DQLACMIELLGMPPQKLLEQSKRAKYFINSKG 446          
BLAST of FC925228 vs. ExPASy Swiss-Prot
Match: MBK2_CAEEL (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 OS=Caenorhabditis elegans GN=mbk-2 PE=1 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 9.075e-12
Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 1
Query:  487 KLVDFGNACWTHKQFTNDIQTRQYRCPEVLLGSKYSTSADLWSFACICFELATG 648
            K++DFG++C+  ++    IQ+R YR PEV+LG+KY    D+WS  CI  EL TG
Sbjct:  604 KVIDFGSSCFDDQRIYTYIQSRFYRAPEVILGTKYGMPIDMWSLGCILAELLTG 657          

HSP 2 Score: 27.335 bits (59), Expect = 9.075e-12
Identity = 14/32 (43.75%), Postives = 18/32 (56.25%), Query Frame = 2
Query:  647 DHLALMMELLGMMPRKIALGGRYSRDFFNRHG 742
            D LAL++ELLGM P K     + +R F    G
Sbjct:  668 DQLALIIELLGMPPPKSLETAKRARTFITSKG 699          
BLAST of FC925228 vs. ExPASy Swiss-Prot
Match: MBK2_CAEBR (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 OS=Caenorhabditis briggsae GN=mbk-2 PE=3 SV=2)

HSP 1 Score: 61.6178 bits (148), Expect = 9.075e-12
Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 1
Query:  487 KLVDFGNACWTHKQFTNDIQTRQYRCPEVLLGSKYSTSADLWSFACICFELATG 648
            K++DFG++C+  ++    IQ+R YR PEV+LG+KY    D+WS  CI  EL TG
Sbjct:  603 KVIDFGSSCFDDQRIYTYIQSRFYRAPEVILGTKYGMPIDMWSLGCILAELLTG 656          

HSP 2 Score: 27.335 bits (59), Expect = 9.075e-12
Identity = 14/32 (43.75%), Postives = 18/32 (56.25%), Query Frame = 2
Query:  647 DHLALMMELLGMMPRKIALGGRYSRDFFNRHG 742
            D LAL++ELLGM P K     + +R F    G
Sbjct:  667 DQLALIIELLGMPPPKSLETAKRARTFITSKG 698          
BLAST of FC925228 vs. ExPASy Swiss-Prot
Match: DYRK3_DROME (Putative dual specificity tyrosine-phosphorylation-regulated kinase 3 homolog OS=Drosophila melanogaster GN=Dyrk3 PE=1 SV=3)

HSP 1 Score: 61.2326 bits (147), Expect = 1.529e-11
Identity = 25/54 (46.30%), Postives = 38/54 (70.37%), Query Frame = 1
Query:  487 KLVDFGNACWTHKQFTNDIQTRQYRCPEVLLGSKYSTSADLWSFACICFELATG 648
            K++DFG++C+ +++    IQ+R YR PEV+LG KY  + D+WS  CI  EL +G
Sbjct:  419 KVIDFGSSCFENQRIYTYIQSRFYRAPEVILGGKYGRAIDMWSLGCILAELLSG 472          

HSP 2 Score: 26.9498 bits (58), Expect = 1.529e-11
Identity = 12/32 (37.50%), Postives = 19/32 (59.38%), Query Frame = 2
Query:  647 DHLALMMELLGMMPRKIALGGRYSRDFFNRHG 742
            D LA ++E+LGM  + I    + S+ FF+  G
Sbjct:  483 DQLACIIEVLGMPNKNILASSKRSKSFFSPKG 514          
BLAST of FC925228 vs. ExPASy Swiss-Prot
Match: DYRK2_DROME (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Drosophila melanogaster GN=smi35A PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 5.651e-11
Identity = 26/54 (48.15%), Postives = 38/54 (70.37%), Query Frame = 1
Query:  487 KLVDFGNACWTHKQFTNDIQTRQYRCPEVLLGSKYSTSADLWSFACICFELATG 648
            K++DFG++C+  ++    IQ+R YR PEV+LG +Y T+ D+WS  CI  EL TG
Sbjct:  341 KVIDFGSSCYVDRKIYTYIQSRFYRSPEVILGLQYGTAIDMWSLGCILAELYTG 394          

HSP 2 Score: 23.8682 bits (50), Expect = 5.651e-11
Identity = 11/29 (37.93%), Postives = 18/29 (62.07%), Query Frame = 2
Query:  647 DHLALMMELLGMMPRKIALGGRYSRDFFN 733
            + LA +ME+LG+ P+ +    R  R FF+
Sbjct:  405 EQLACIMEVLGLPPKVLISVARRRRLFFD 433          
The following BLAST results are available for this feature:
BLAST of FC925228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
SPK1_CAEBR2.176e-1552.70Serine/threonine-protein kinase spk-1 OS=Caenorhab... [more]
DYRK3_HUMAN6.055e-1548.44Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_MACFA6.060e-1548.44Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_RAT1.022e-1446.88Dual specificity tyrosine-phosphorylation-regulate... [more]
SKY1_YEAST1.411e-1452.05Serine/threonine-protein kinase SKY1 OS=Saccharomy... [more]
DYRK3_MOUSE2.913e-1446.88Dual specificity tyrosine-phosphorylation-regulate... [more]
MBK2_CAEEL9.075e-1248.15Dual specificity tyrosine-phosphorylation-regulate... [more]
MBK2_CAEBR9.075e-1248.15Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_DROME1.529e-1146.30Putative dual specificity tyrosine-phosphorylation... [more]
DYRK2_DROME5.651e-1148.15Dual specificity tyrosine-phosphorylation-regulate... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YA20FM1 TF Citrus clementina cDNA clone KN0AAP11YA20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925228 ID=FC925228; Name=FC925228; organism=Citrus clementina; type=EST; length=749bp
TATTTGCATCGCGAGCTTTCAATTATTCACACTGATTTGAAGCCAGAGAA
TGTGTTGCTCTTGTCAAAAATTGATCCATCTAAAGATGCCCGCAAATCAG
GTGTTCCCCTCATCCTTCCTACTAAAACGGATAAAGTTGTGACAGAATCT
AGTGCTTCAAAAGACAATAAGAGTCTTTATGGGGATCTGACCAAGAACCA
AAAAAAGAAGGTAAAAAAAAAGGCCAAGAAGGCTGCTCAGGGTTGTGCAG
GGACTGAAGCATTTGATGAAAGTGAAGCAGACTCCAAACCATCTAGTCCT
GATAATTTTAGTGTCGATACAATACCAAATGGGGTTTCTGTTGAAGAACG
GCGGATTGATTCTGTGGTTAACAATGAATCATCCAGGGGTAATGAAGTAA
AAAATACTAGCCAAGGAGTTAAGGGTCATAGAAGGCCAAGCCGTGGCACG
AGGAAAAATCTTTTGGCTGCGGTTGATGTGCAGTGTAAATTGGTTGATTT
TGGAAATGCTTGTTGGACACACAAACAATTTACAAATGACATTCAGACCA
GGCAGTATAGATGTCCCGAGGTTCTTCTTGGATCTAAATACTCCACTTCA
GCAGATCTATGGTCCTTTGCTTGCATATGCTTTGAGCTGGCGACAGGATC
ACTTGGCACTGATGATGGAGCTTCTCGGGATGATGCCACGCAAGATTGCA
TTGGGTGGTCGCTATTCCCGTGATTTCTTCAACAGACATGGGGATTTGA
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