FC925239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB34G_ARATH (ABC transporter G family member 34 OS=Arabidopsis thaliana GN=ABCG34 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 2.134e-59 Identity = 111/178 (62.36%), Postives = 134/178 (75.28%), Query Frame = 1 Query: 19 GTVQLSNCGESGNDNRERNSSS---SLTE--AEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 G + + E G D + + S S+ E + +SH K+GMVLPF+P SL F+ V Y VDMP +MK QGV D+L LL V GAFRPGVLTAL+GVSGAGKTTLMDVLAGRKTGGY+ G I ISGYPK Q TFAR+SGYCEQNDIHSP VT+YESL YSAWLRL +++++TR+MF+ Sbjct: 802 GNSKATTVVEEGKDKHKGSHSGTGGSVVELTSTSSHGPKKGMVLPFQPLSLAFNNVNYYVDMPAEMKAQGVEGDRLQLLRDVGGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYVEGSINISGYPKNQATFARVSGYCEQNDIHSPHVTVYESLIYSAWLRLSADIDTKTREMFV 979 HSP 2 Score: 30.8018 bits (68), Expect = 2.134e-59 Identity = 15/22 (68.18%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 518 KPERCLFEEVMELVELKPLRQS 583 K EEVMELVELKPLR S Sbjct: 973 KTREMFVEEVMELVELKPLRNS 994
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB39G_ARATH (ABC transporter G family member 39 OS=Arabidopsis thaliana GN=ABCG39 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.783e-59 Identity = 110/169 (65.09%), Postives = 130/169 (76.92%), Query Frame = 1 Query: 46 ESGNDNRE---RNSSSSLTEAEASHPK--KRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 E G D ++ R + S+ E +S K KRGMVLPF+P SL F+ V Y VDMP +MK QGV D+L LL V GAFRPG+LTAL+GVSGAGKTTLMDVLAGRKTGGYI G I ISGYPK Q TFAR+SGYCEQNDIHSP VT+YESL YSAWLRL +++ +TR++F+ Sbjct: 812 EEGKDKQKGENRGTEGSVVELNSSSNKGPKRGMVLPFQPLSLAFNNVNYYVDMPSEMKAQGVEGDRLQLLRDVGGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQTTFARVSGYCEQNDIHSPHVTVYESLIYSAWLRLSTDIDIKTRELFV 980 HSP 2 Score: 31.5722 bits (70), Expect = 2.783e-59 Identity = 15/23 (65.22%), Postives = 16/23 (69.57%), Query Frame = 2 Query: 515 LKPERCLFEEVMELVELKPLRQS 583 +K EEVMELVELKPLR S Sbjct: 973 IKTRELFVEEVMELVELKPLRNS 995
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR2_NICPL (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia GN=PDR2 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.939e-57 Identity = 103/144 (71.53%), Postives = 121/144 (84.03%), Query Frame = 1 Query: 106 SHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 ++ ++GM+LPF+P SL F+ V Y VDMP +MK QGV E++L LL SGAFRPG+LTAL+GVSGAGKTTLMDVLAGRKTGGYI G I ISGYPK Q TFAR+SGYCEQNDIHSP+VT+YESL YSAWLRL +V +ETRKMF+ Sbjct: 843 NNESRKGMILPFQPLSLAFNHVNYYVDMPAEMKTQGVEEERLQLLRDASGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGSINISGYPKNQTTFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLASDVKTETRKMFV 986 HSP 2 Score: 25.0238 bits (53), Expect = 1.939e-57 Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 539 EEVMELVELKPLRQS 583 EEVMELVELK LR + Sbjct: 987 EEVMELVELKLLRNA 1001
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 1.038e-55 Identity = 112/164 (68.29%), Postives = 127/164 (77.44%), Query Frame = 1 Query: 46 ESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 E+ +NR N S S S KRGMVLPF P +++FD V Y VDMP++MK QGV +DKL LL V+G FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI GDIRISG+PK+QETFARISGYCEQNDIHSP VT+ ESL YSA+LRLP EV + F+ Sbjct: 783 ENTEENRAENGSKS-----KSIDVKRGMVLPFTPLTMSFDNVNYYVDMPKEMKEQGVSKDKLQLLKEVTGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKRQETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLPKEVTKYEKMRFV 941
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 2.312e-55 Identity = 107/156 (68.59%), Postives = 124/156 (79.49%), Query Frame = 1 Query: 70 RNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 R S S EA K+GMVLPF P +++FD+V Y VDMP +M+ QGV E +L LL GV+GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI GD+RISG+PK QETFARISGYCEQ DIHSP VT+ ESL +SA+LRLP EV + + MF+ Sbjct: 839 RMSRDSAAEASGGAGNKKGMVLPFTPLAMSFDDVKYFVDMPGEMRDQGVTETRLQLLKGVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGFPKVQETFARISGYCEQTDIHSPQVTVRESLIFSAFLRLPKEVGKDEKMMFV 994
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 5.151e-55 Identity = 108/159 (67.92%), Postives = 127/159 (79.87%), Query Frame = 1 Query: 61 NRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 N S S + A + P RGMVLPFEP ++F+E+ Y VDMP +MK QGV DKL LL+G+SGAFRPGVLTALMGVSGAGKTTLMDVL+GRKTGGYI G+I ISGYPK Q TFARISGYCEQNDIHSP +T+ ESL +SA+LRLP EVN + +K+F+ Sbjct: 878 NTSDRSHSYINAAGRTAPG-RGMVLPFEPLYMSFNEINYYVDMPLEMKSQGVTADKLQLLSGISGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYIEGEIYISGYPKNQATFARISGYCEQNDIHSPQITVRESLLFSAFLRLPKEVNDQEKKIFV 1035
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR5_ORYSJ (Pleiotropic drug resistance protein 5 OS=Oryza sativa subsp. japonica GN=PDR5 PE=2 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 2.556e-54 Identity = 103/164 (62.80%), Postives = 128/164 (78.05%), Query Frame = 1 Query: 46 ESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 E+ ++ + + + T + +RGMVLPF+P SL+F+ + Y VDMP +MK QG E +L LL+ +SGAFRPGVLTAL+GVSGAGKTTLMDVLAGRKT G I GDI++SGYPKKQETFARISGYCEQ DIHSP +T+YES+ YSAWLRL EV+ TRK+F+ Sbjct: 816 EAESNQEQMSEVINGTNGTENRRSQRGMVLPFQPLSLSFNHMNYYVDMPAEMKAQGFTESRLQLLSDISGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTSGTIEGDIKLSGYPKKQETFARISGYCEQTDIHSPNLTVYESIVYSAWLRLSSEVDKNTRKVFV 979
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB35G_ARATH (ABC transporter G family member 35 OS=Arabidopsis thaliana GN=ABCG35 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 2.556e-54 Identity = 107/164 (65.24%), Postives = 129/164 (78.66%), Query Frame = 1 Query: 46 ESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 E + + + S+ TE E+ KK GMVLPF P +++FD+V Y VDMP +M+ QGV E +L LL GV+ AFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI GD+R+SG+PKKQETFARISGYCEQ DIHSP VT+ ESL +SA+LRL EV+ E + MF+ Sbjct: 805 EEDEEAKGKAGSNKETEMESVSAKK-GMVLPFTPLAMSFDDVKYFVDMPAEMREQGVQETRLQLLKGVTSAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRVSGFPKKQETFARISGYCEQTDIHSPQVTVRESLIFSAFLRLAKEVSKEDKLMFV 967
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB38G_ARATH (ABC transporter G family member 38 OS=Arabidopsis thaliana GN=ABCG38 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 3.339e-54 Identity = 95/135 (70.37%), Postives = 121/135 (89.63%), Query Frame = 1 Query: 133 LPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 +PF+P +TF+ + YSVD P++MK +G+ E+KLVLLNG+SGAFRPGVLTALMGVSGAGKTTLMDVLAGRK GYI G+I +SG+PKKQ++FAR+SGYCEQ+DIHSP +T+YESL YSAWLRLPP++++ TR++FI Sbjct: 814 IPFKPLYMTFENITYSVDTPKEMKEKGIRENKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKNTGYIQGEIYVSGFPKKQDSFARVSGYCEQSDIHSPLLTVYESLLYSAWLRLPPDIDTHTRELFI 948 HSP 2 Score: 69.3218 bits (168), Expect = 1.569e-11 Identity = 38/98 (38.78%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 202 KLQGVPEDK--LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR-KTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSA 486 K++ +P+ K + +LN VSG +PG LT L+G G+GK+TL+ L+G+ +TG TG + +G+ + R +GY +Q D+H P +T+ E+L +SA Sbjct: 148 KIRVLPDRKKRISILNDVSGIIKPGRLTLLLGPPGSGKSTLLKALSGKTETGLRSTGKVTYNGHELHEFVPERTAGYIDQYDVHLPDLTVRETLKFSA 245
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR12_ORYSJ (Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.403e-52 Identity = 100/134 (74.63%), Postives = 115/134 (85.82%), Query Frame = 1 Query: 118 KRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSE 519 +RGMVLPF P S++FD+V Y VDMP +MK QGV +D+L LL V+G+FRP VLTALMGVSGAGKTTLMDVLAGRKTGGYI GD+RISGYPK QETFARISGYCEQNDIHSP VT+ ESL YSA+LRLP ++ + Sbjct: 882 RRGMVLPFTPLSMSFDDVNYYVDMPAEMKQQGVVDDRLQLLRDVTGSFRPAVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDMRISGYPKNQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPEKIGDQ 1015 The following BLAST results are available for this feature:
BLAST of FC925239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925239 ID=FC925239; Name=FC925239; organism=Citrus clementina; type=EST; length=585bpback to top |