FC925239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB32G_ARATH (ABC transporter G family member 32 OS=Arabidopsis thaliana GN=ABCG32 PE=1 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.645e-51 Identity = 96/141 (68.09%), Postives = 119/141 (84.40%), Query Frame = 1 Query: 115 KKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 K RGMVLPF+P SL+F + Y VD+P +K QG+ ED+L LL ++GAFRPGVLTAL+GVSGAGKTTLMDVLAGRKTGG I GD+ ISG+PK+QETFARISGYCEQND+HSP +T+ ESL +SA LRLP +++SET++ F+ Sbjct: 805 KNRGMVLPFQPLSLSFSNINYYVDVPLGLKEQGILEDRLQLLVNITGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGTIEGDVYISGFPKRQETFARISGYCEQNDVHSPCLTVVESLLFSACLRLPADIDSETQRAFV 945
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB31G_ARATH (ABC transporter G family member 31 OS=Arabidopsis thaliana GN=ABCG31 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 5.893e-51 Identity = 97/141 (68.79%), Postives = 118/141 (83.69%), Query Frame = 1 Query: 115 KKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 +K+GM+LPF+P ++TF V Y VDMP++M+ QGVPE +L LL+ VSG F PGVLTAL+G SGAGKTTLMDVLAGRKTGGY GDIRISG+PK+Q+TFARISGY EQNDIHSP VT+ ESL++SA LRLP E+ E +K F+ Sbjct: 813 EKKGMILPFKPLTMTFHNVNYYVDMPKEMRSQGVPETRLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYTEGDIRISGHPKEQQTFARISGYVEQNDIHSPQVTVEESLWFSASLRLPKEITKEQKKEFV 953
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.715e-50 Identity = 97/170 (57.06%), Postives = 128/170 (75.29%), Query Frame = 1 Query: 28 QLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 +L +S D+ R + T++ ++ MVLPF+P ++TF ++ Y VDMP +M+ QG + KL LL+ ++GAFRPG+LTALMGVSGAGKTTL+DVLAGRKT GYI GDIRISG+PK QETFAR+SGYCEQ DIHSP +T+ ES+ YSAWLRL PE+++ T+ F+ Sbjct: 811 ELQGTEKSTEDSSVRKKT---TDSPVKTEEEDKMVLPFKPLTVTFQDLNYFVDMPVEMRDQGYDQKKLQLLSDITGAFRPGILTALMGVSGAGKTTLLDVLAGRKTSGYIEGDIRISGFPKVQETFARVSGYCEQTDIHSPNITVEESVIYSAWLRLAPEIDATTKTKFV 977
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 8.510e-50 Identity = 94/140 (67.14%), Postives = 114/140 (81.43%), Query Frame = 1 Query: 118 KRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 ++GMVLPF+P S+ F + Y VD+P ++K QG+ ED+L LL V+GAFRPG+LTAL+GVSGAGKTTLMDVLAGRKTGG I G I ISGYPK QETF RISGYCEQND+HSP +T+ ESL YSA LRLP V+ TR++F+ Sbjct: 812 QKGMVLPFQPLSMCFKNINYYVDVPAELKSQGIVEDRLQLLIDVTGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGLIEGSITISGYPKNQETFTRISGYCEQNDVHSPCLTVIESLLYSACLRLPSHVDVNTRRVFV 951
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB33G_ARATH (ABC transporter G family member 33 OS=Arabidopsis thaliana GN=ABCG33 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.234e-49 Identity = 92/137 (67.15%), Postives = 114/137 (83.21%), Query Frame = 1 Query: 127 MVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 M+LPF+P ++TF ++ Y VD+P +MK QG E KL LL+ ++GAFRPGVLTALMG+SGAGKTTL+DVLAGRKT GYI G+IRISG+ K QETFAR+SGYCEQ DIHSP +T+ ESL YSAWLRL PE+N +T+ F+ Sbjct: 804 MILPFKPLTITFQDLNYYVDVPVEMKGQGYNEKKLQLLSEITGAFRPGVLTALMGISGAGKTTLLDVLAGRKTSGYIEGEIRISGFLKVQETFARVSGYCEQTDIHSPSITVEESLIYSAWLRLVPEINPQTKIRFV 940
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR13_ORYSJ (Pleiotropic drug resistance protein 13 OS=Oryza sativa subsp. japonica GN=PDR13 PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.096e-48 Identity = 93/148 (62.84%), Postives = 119/148 (80.41%), Query Frame = 1 Query: 94 EAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 E + K+GM+LPF+P ++TF V Y V+MP++M+ +GVPE +L LL+ VSG FRP VLTAL+G SG+GKTTLMDVLAGRKTGGYI GDIRISG+ K+Q TFARI+GY EQNDIHSP VT+ ESL++S+ LRLP +++ ETR F+ Sbjct: 818 EGQTECKSKKGMILPFQPLTMTFHNVNYYVNMPKEMQAKGVPEKRLQLLSEVSGIFRPRVLTALVGASGSGKTTLMDVLAGRKTGGYIEGDIRISGHKKEQRTFARIAGYVEQNDIHSPQVTVEESLWFSSTLRLPNDISRETRHAFV 965
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 7.965e-48 Identity = 97/178 (54.49%), Postives = 125/178 (70.22%), Query Frame = 1 Query: 76 SSSSLTEAEA---------SHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI*GSHGACGAETIETV 582 SS S+ +A+A SH + MVLPFEP SL F +V Y VD P M G + +L LL+ ++GA RPG+LTALMGVSGAGKTTL+DVLAGRKT GY+ G+I++ GYPK QETFAR+SGYCEQ DIHSP +T+ ES+ +SAWLRL P+++S+T+ F+ E IET+ Sbjct: 812 SSDSIDKADAAENSKATMDSHERAGRMVLPFEPLSLVFQDVQYYVDTPAAMTELGFTQKRLQLLSDITGALRPGILTALMGVSGAGKTTLLDVLAGRKTTGYVEGEIKVGGYPKVQETFARVSGYCEQTDIHSPQITVEESVIFSAWLRLHPQIDSKTKYEFV--------KEVIETI 981 HSP 2 Score: 67.781 bits (164), Expect = 4.565e-11 Identity = 34/88 (38.64%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 226 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSA 486 K+ +LN VSG +PG +T L+G G GKT+L+ L+G ++G+I +GY ++ + S Y QND+H P +T+ E+L YS+ Sbjct: 184 KIKILNDVSGVIKPGRMTLLLGPPGCGKTSLLKALSGNLDKSLKVSGEISYNGYKLEEFVPQKTSAYVSQNDLHIPEMTVRETLDYSS 271
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB43G_ARATH (ABC transporter G family member 43 OS=Arabidopsis thaliana GN=ABCG43 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.114e-41 Identity = 89/160 (55.62%), Postives = 115/160 (71.88%), Query Frame = 1 Query: 61 NRERNSSSSLTEAE-ASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 + ++N+ SS +++ ASH K LPFEP + TF +V Y ++ PQ KLQ LL+ V+GAF+PGVLTALMGVSGAGKTTL+DVL+GRKT G I G I + GY K Q+TF+R+SGYCEQ DIHSP +T+ ESL YSAWLRLP ++SET+ + Sbjct: 769 SHDKNTQSSEKDSKIASHSKN---ALPFEPLTFTFQDVQYFIETPQGKKLQ--------LLSDVTGAFKPGVLTALMGVSGAGKTTLLDVLSGRKTRGDIKGQIEVGGYVKVQDTFSRVSGYCEQFDIHSPNLTVQESLKYSAWLRLPCNISSETKSAIV 917
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB42G_ARATH (ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 5.529e-41 Identity = 87/155 (56.13%), Postives = 112/155 (72.26%), Query Frame = 1 Query: 61 NRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETR 525 + E+N+ SS +++ + K LPFEP + TF +V Y ++ PQ KLQ LL+GV+GAF+PGVLTALMGVSGAGKTTL+DVL+GRKT G I G I + GY K Q+TF+R+SGYCEQ DIHSP +T+ ESL YSAWLRL ++SET+ Sbjct: 771 SHEKNTQSSENDSKIASRFKNA--LPFEPLTFTFQDVQYIIETPQGKKLQ--------LLSGVTGAFKPGVLTALMGVSGAGKTTLLDVLSGRKTFGDIKGQIEVGGYVKVQDTFSRVSGYCEQFDIHSPNLTVQESLKYSAWLRLTSNISSETK 915
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB30G_ARATH (ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 7.983e-40 Identity = 84/159 (52.83%), Postives = 110/159 (69.18%), Query Frame = 1 Query: 106 SHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI*GSHGACGAETIETV 582 S K ++LPF+P ++TF V Y ++ PQ Q LL+ ++GA +PGVLT+LMGVSGAGKTTL+DVL+GRKT G I G+I++ GYPK QETFAR+SGYCEQ DIHSP +T+ ESL YSAWLRLP ++S+T+ + E +ETV Sbjct: 792 SRAKTGKIILPFKPLTVTFQNVQYYIETPQGKTRQ--------LLSDITGALKPGVLTSLMGVSGAGKTTLLDVLSGRKTRGIIKGEIKVGGYPKVQETFARVSGYCEQFDIHSPNITVEESLKYSAWLRLPYNIDSKTKNELV--------KEVLETV 934 The following BLAST results are available for this feature:
BLAST of FC925239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925239 ID=FC925239; Name=FC925239; organism=Citrus clementina; type=EST; length=585bpback to top |