FC925239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB41G_ARATH (ABC transporter G family member 41 OS=Arabidopsis thaliana GN=ABCG41 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.323e-39 Identity = 84/159 (52.83%), Postives = 109/159 (68.55%), Query Frame = 1 Query: 106 SHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI*GSHGACGAETIETV 582 S K ++LPF+P ++TF V Y ++ PQ Q LL ++GA +PGVLT+LMGVSGAGKTTL+DVL+GRKT G I G+IR+ GYPK QETFAR+SGYCEQ DIHSP +T+ ESL YSAWLRLP ++++T+ + E +ETV Sbjct: 789 SRAKTGKVILPFKPLTVTFQNVQYYIETPQGKTRQ--------LLFDITGALKPGVLTSLMGVSGAGKTTLLDVLSGRKTRGIIKGEIRVGGYPKVQETFARVSGYCEQFDIHSPNITVEESLKYSAWLRLPYNIDAKTKNELV--------KEVLETV 931
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: ABCG6_DICDI (ABC transporter G family member 6 OS=Dictyostelium discoideum GN=abcG6 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.702e-24 Identity = 66/163 (40.49%), Postives = 94/163 (57.67%), Query Frame = 1 Query: 49 SGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 S ++N N+S+ ++ + G L F+ D V D P++ K Q +L LL + G +PG + ALMG SGAGK+TL+DVLA RKTGG+ITG+I I+G P + T RI Y EQ D+ P T+ E++ +SA RLPPEV E R+ ++ Sbjct: 885 SPSNNNNNNNSNEKSKNGKDIGSETGSYLQFKKLCYAVDVKVDDPDNPKKKKSQ-----RLQLLTDIDGYVKPGQMLALMGPSGAGKSTLLDVLAQRKTGGHITGEILINGKPPSEFT-NRIRAYVEQMDVLPPTQTVREAIAFSARCRLPPEVTKEERESYV 1041
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: ABCG5_DICDI (ABC transporter G family member 5 OS=Dictyostelium discoideum GN=abcG5 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 8.021e-24 Identity = 67/163 (41.10%), Postives = 93/163 (57.06%), Query Frame = 1 Query: 49 SGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 S N N + S ++ + S + G L F+ D D P++ K Q +L LL + G +PG + ALMG SGAGK+TL+DVLA RKTGG+ITG+I I+G P + T RI Y EQ D+ P T+ E++ +SA RLPPEV E R++F+ Sbjct: 862 SKNGNHSKQKPISTSQKDIS--SETGSYLQFKKLCYAVDVKADDPDNPKKKKSQ-----RLQLLTDIDGYVKPGQMLALMGPSGAGKSTLLDVLAQRKTGGHITGEILINGKPPSEFT-NRIRAYVEQMDVLPPTQTVREAIAFSARCRLPPEVTKEEREIFV 1016
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR5_YEAST (Pleiotropic ABC efflux transporter of multiple drugs OS=Saccharomyces cerevisiae GN=PDR5 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.580e-22 Identity = 53/101 (52.48%), Postives = 70/101 (69.31%), Query Frame = 1 Query: 235 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 +LN V G +PG LTALMG SGAGKTTL+D LA R T G ITGDI ++G P + ++F R GYC+Q D+H T+ ESL +SA+LR P EV+ E + ++ Sbjct: 887 ILNNVDGWVKPGTLTALMGASGAGKTTLLDCLAERVTMGVITGDILVNGIP-RDKSFPRSIGYCQQQDLHLKTATVRESLRFSAYLRQPAEVSIEEKNRYV 986
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDH1_CANGA (ATP-binding cassette transporter CGR1 OS=Candida glabrata GN=PDH1 PE=3 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 1.280e-21 Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 1 Query: 235 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 +LN V G +PG LTALMG SGAGKTTL+D LA R T G ITGD+ ++G P + +F+R GYC+Q D+H T+ ESL +SA+LR P V+ E + ++ Sbjct: 903 ILNNVDGWVKPGTLTALMGASGAGKTTLLDCLAERTTMGVITGDVMVNGRP-RDTSFSRSIGYCQQQDLHLKTATVRESLRFSAYLRQPSSVSIEEKNEYV 1002
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: ABCG2_DICDI (ABC transporter G family member 2 OS=Dictyostelium discoideum GN=abcG2 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 2.853e-21 Identity = 63/168 (37.50%), Postives = 98/168 (58.33%), Query Frame = 1 Query: 55 NDNRERNSSS-------SLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 ND R + +S S + + + K +P Y + + ++VY VD+ + K Q +L LLN ++G +PG+L ALMG SGAGK+TL+DVLA RKTGG+ G I I+G ++ + F R+S Y EQ D+ P T+ E++ +SA RLP ++ +E + F+ Sbjct: 676 NDKRSKKASKRSKKIKDSKVDIKENRMVKAQKEIPIGCY-MQWKDLVYEVDVKKDGKNQ-----RLRLLNEINGYVKPGMLLALMGPSGAGKSTLLDVLANRKTGGHTKGQILING-QERTKYFTRLSAYVEQFDVLPPTQTVKEAILFSAKTRLPSDMPNEEKIKFV 836
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: ABCGI_DICDI (ABC transporter G family member 18 OS=Dictyostelium discoideum GN=abcG18 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.726e-21 Identity = 57/128 (44.53%), Postives = 83/128 (64.84%), Query Frame = 1 Query: 154 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 + + ++VY VD+ + K Q +L LLNG++G +PG+L ALMG SGAGK+TL+DVLA RKTGG+ G I I+G ++ + F R S Y EQ DI +P T+ E + +SA RLP V + ++ F+ Sbjct: 808 MQWKDLVYEVDVKKDGKNQ-----RLRLLNGINGYVKPGMLVALMGPSGAGKSTLLDVLANRKTGGHTKGQILING-QERTKYFTRTSAYVEQMDILTPVSTVREVILFSAKNRLPNSVPIQEKEEFV 929
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: ABCGE_DICDI (ABC transporter G family member 14 OS=Dictyostelium discoideum GN=abcG14 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.866e-21 Identity = 53/108 (49.07%), Postives = 75/108 (69.44%), Query Frame = 1 Query: 214 VPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 VP + +LLN + G +PG +TALMG SGAGKTTL+DVLA RKT G + GD ++G + + F RI+GY EQ D+H+P +T+ E+L +SA LR PEV+ E + ++ Sbjct: 816 VPGGERLLLNNIEGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTLGVVEGDSHLNG-RELEIDFERITGYVEQMDVHNPGLTVREALRFSAKLRQEPEVSLEEKFKYV 922
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: ABCGB_DICDI (ABC transporter G family member 11 OS=Dictyostelium discoideum GN=abcG11 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.355e-21 Identity = 67/181 (37.02%), Postives = 103/181 (56.91%), Query Frame = 1 Query: 4 DNTFGG-TVQLSNCGESG--NDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 D+T GG T ++ G++ ND E +++ S+ K L + T+ + Y+V +P +L LL+ + G +PG +TALMG SGAGKTTL+DVLA RKT G + GD ++G + + F RI+GY EQ D+H+P +T+ E+L +SA LR PEV+ E + ++ Sbjct: 758 DHTSGGYTHKVYKKGKAPKMNDVEEEKQQNAIVAKATSNMKD---TLHMDGGIFTWQNIRYTVKVPGGERL---------LLDNIEGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTLGVVEGDSHLNG-RELEIDFERITGYVEQMDVHNPGLTVREALRFSAKLRQEPEVSLEEKFKYV 925
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: ABCGA_DICDI (ABC transporter G family member 10 OS=Dictyostelium discoideum GN=abcG10 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.416e-20 Identity = 61/161 (37.89%), Postives = 91/161 (56.52%), Query Frame = 1 Query: 55 NDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 ND+ E +++ E S K L T++ + Y+V + + L+LLN V G +PG +TALMG SGAGKTTL+DVLA RKT G +TG ++G + F RI+GY EQ D+H+P +T+ E+L +SA LR P V+ + + ++ Sbjct: 808 NDDEEERQQNAMVENATSKMKD---TLKMRESCFTWNHIHYTVQLNGK---------DLLLLNDVEGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTMGTVTGKCLLNG-KELNIDFERITGYVEQMDVHNPGLTVREALRFSAKLRQEPTVSLQDKYEYV 955 The following BLAST results are available for this feature:
BLAST of FC925239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925239 ID=FC925239; Name=FC925239; organism=Citrus clementina; type=EST; length=585bpback to top |