FC925239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB19G_ARATH (ABC transporter G family member 19 OS=Arabidopsis thaliana GN=ABCG19 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.761e-14 Identity = 52/164 (31.71%), Postives = 88/164 (53.66%), Query Frame = 1 Query: 43 GESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFAR-ISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKM 531 G+SG+ + + + + + EA + K PY L F+ + Y V + ++ K LL+ VSG G + A++G SGAGK+TL+D LAGR G + G + ++G Q + IS Y Q+D+ P +T+ E+L +++ RLP + S+++KM Sbjct: 43 GDSGDGVKSDDPAHHIIDVEALYVKP-------VPYVLNFNNLQYDVTLRRRFGFSRQNGVK-TLLDDVSGEASDGDILAVLGASGAGKSTLIDALAGRVAEGSLRGSVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSL-SKSKKM 197
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: ABCGC_DICDI (ABC transporter G family member 12 OS=Dictyostelium discoideum GN=abcG12 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.283e-13 Identity = 51/140 (36.43%), Postives = 72/140 (51.43%), Query Frame = 1 Query: 154 LTFDEVVYSVDMPQQMKL---------------------QGVP---EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLP 501 LTF +VY VD + KL GV E +L +LN VSG G L ALMG SG+GK+TL+D+LA RK+ G ITG + ++G + E + + Y Q D+ T++E+L + A L+LP Sbjct: 22 LTFKNIVYKVDNKKYKKLVKKQEKAKKKNDTESSTGDMNTGVSTTIEKELTILNNVSGVIEKGELVALMGPSGSGKSTLLDILAQRKSTGKITGQLLVNG-KEIGEAYKKYCSYVTQEDVLLQTSTVFETLKFYADLKLP 160
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: ABCG4_DICDI (ABC transporter G family member 4 OS=Dictyostelium discoideum GN=abcG4 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.676e-13 Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 1 Query: 196 QMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSE 519 ++ + + E +L +L+ VSG G + ALMG SG+GK+TL+D+LA RK+ G ITG I ++G + E + Y Q ++ T+YE+L + A LRLP ++E Sbjct: 222 KLPIDRIIEKELTILSNVSGIVEKGEMVALMGPSGSGKSTLLDILANRKSTGTITGKILVNG-KEIGEAYKMFCSYVTQEEVFLETSTVYETLKFHADLRLPDMTDTE 328
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB27G_ARATH (ABC transporter G family member 27 OS=Arabidopsis thaliana GN=ABCG27 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.189e-13 Identity = 44/125 (35.20%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 157 TFDEVVYSVDMPQQMKLQGVPED-KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRK 528 TF + +D+ ++ +G+ + +LNG+SG+ PG L ALMG SG+GKTTL++ L GR I G + + P + RI G+ Q+D+ P +T+ E+L Y+A LRLP + + ++ Sbjct: 140 TFPIYLKFIDITYKVTTKGMTSSSEKSILNGISGSAYPGELLALMGPSGSGKTTLLNALGGRFNQQNIGGSVSYNDKPYSKHLKTRI-GFVTQDDVLFPHLTVKETLTYTALLRLPKTLTEQEKE 263
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.859e-13 Identity = 42/136 (30.88%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 145 PYSLTFDEVVYSVDMPQQMKLQG-VPEDKL------VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKM 531 P+ L+F+ + Y+V + +++ VP + LL+ +SG R G + A++G SG+GK+TL+D LA R G + G + ++G + IS Y Q+D+ P +T+ E+L ++A RLP + +K+ Sbjct: 70 PFVLSFNNLTYNVSVRRKLDFHDLVPWRRTSFSKTKTLLDNISGETRDGEILAVLGASGSGKSTLIDALANRIAKGSLKGTVTLNGEALQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKL 205
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: SCRT_DROME (Protein scarlet OS=Drosophila melanogaster GN=st PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 4.877e-13 Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 1 Query: 235 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 ++N +GA +PG L ALMG SG+GKTTLM LA R+ G + GDI I+G + RISGY Q+D+ +T+ E L + A LRL V+ E R++ I Sbjct: 90 IINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILING-RRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLII 190
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR12_YEAST (ATP-dependent permease PDR12 OS=Saccharomyces cerevisiae GN=PDR12 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.419e-12 Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 235 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 LL+ V G +PG +TALMG SGAGKTTL++VLA R G ITGD+ ++ P +F R GY Q D H +++ ESL ++A LR V E + ++ Sbjct: 860 LLSDVFGYVKPGKMTALMGESGAGKTTLLNVLAQRINMGVITGDMLVNAKP-LPASFNRSCGYVAQADNHMAELSVRESLRFAAELRQQSSVPLEEKYEYV 959
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR11_YEAST (ATP-dependent permease PDR11 OS=Saccharomyces cerevisiae GN=PDR11 PE=1 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 3.161e-12 Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 235 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ-ETFARISGYCEQNDIHSPFVTIYESLFYSAWLR 495 L+N SG G LTALMG SGAGKTTL++VL+ R G +TG++ I G P + F R G+ +Q D+H +T+ ESL S LR Sbjct: 765 LINDASGYISSG-LTALMGESGAGKTTLLNVLSQRTESGVVTGELLIDGQPLTNIDAFRRSIGFVQQQDVHLELLTVRESLEISCVLR 851
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB24G_ARATH (ABC transporter G family member 24 OS=Arabidopsis thaliana GN=ABCG24 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.161e-12 Identity = 35/101 (34.65%), Postives = 65/101 (64.36%), Query Frame = 1 Query: 235 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 +L V+G+ +PG +TA+MG SGAGKT+L+ LAG+ G ++G I I+G + ++ +I G+ Q+D+ +T+ E+L++ A RLP +++ + + + Sbjct: 493 VLRCVTGSMKPGRITAVMGPSGAGKTSLLSALAGKAVGCKLSGLILINGKQESIHSYKKIIGFVPQDDVVHGNLTVEENLWFHAKCRLPADLSKADKVLVV 593
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AUS1_YEAST (ATP-dependent permease AUS1 OS=Saccharomyces cerevisiae GN=AUS1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.392e-12 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 235 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP-KKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLR 495 L+N SG G LTALMG SGAGKTTL++VL+ R G ++G+I I G+P ++ F R G+ +Q D+H +++ ESL S LR Sbjct: 765 LINNASGFISSG-LTALMGESGAGKTTLLNVLSQRVETGVVSGEILIDGHPLTDEDAFKRSIGFVQQQDLHLDLLSVKESLEISCLLR 851 The following BLAST results are available for this feature:
BLAST of FC925239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925239 ID=FC925239; Name=FC925239; organism=Citrus clementina; type=EST; length=585bpback to top |