FC925244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925244 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.960e-55 Identity = 97/190 (51.05%), Postives = 137/190 (72.11%), Query Frame = 3 Query: 150 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGD--FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKG 713 ++K L+R+AY+N +YP TSI LI YC LPA L + +FI+ ++ + +++ +++ +LEI+WSG+ +E+WWRNEQFW+IGGTSAHL AV QGLLKV+AGI+ +FT+TSK+ D+ D FA+LY+ KWTSL+IPP +++VNL+ I G S I S W L G +FF+ WV+AHLYPF KG Sbjct: 935 KMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLYIVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKG 1124
BLAST of FC925244 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.703e-55 Identity = 92/192 (47.92%), Postives = 139/192 (72.40%), Query Frame = 3 Query: 150 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS----DDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKG 713 +LKLL+R+AY+N +YP TSI ++ YC LP L + F++ ++ ++ +++ +S+ +LE++WSG+ +E+WWRNEQFW+IGGTSAHL AV QG+LKV+AG++ +FT+TSK+S D+D +FA+LY+FKWT+L+IPP T++I+N+V I+ V + S W L G FFA WV+ H+YPF KG Sbjct: 745 KLKLLQRIAYLNVGIYPFTSIFILTYCFLPPLSLFSGHFVVETLTGSFLIYLLIITLSLCGLAVLEVKWSGISLEEWWRNEQFWLIGGTSAHLVAVLQGILKVIAGVEISFTLTSKSSTGGDDEDDEFADLYLFKWTALMIPPLTIIILNIVAILFAVCRTVFSANPQWSNLLGGTFFASWVLLHMYPFAKG 936
BLAST of FC925244 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.703e-55 Identity = 99/190 (52.11%), Postives = 136/190 (71.58%), Query Frame = 3 Query: 150 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS--DDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKG 713 RLK L+R+AY+N +YP TS+ LI YC LPA L + +FI+ + + +L+ I++ +LE++WSG+G+E+WWRNEQFWVIGGTSAHL AV QGLLKV+AGI+ +FT+T+KA+ DDD FAELY+ KWTSL IPP V+ +N++ +V GVS + + + L G FF+ WV+AH YPF KG Sbjct: 779 RLKFLQRMAYLNVGIYPFTSLFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWRNEQFWVIGGTSAHLAAVLQGLLKVVAGIEISFTLTAKAAAEDDDDPFAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKG 968
BLAST of FC925244 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.703e-55 Identity = 99/190 (52.11%), Postives = 136/190 (71.58%), Query Frame = 3 Query: 150 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS--DDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKG 713 RLK L+R+AY+N +YP TS+ LI YC LPA L + +FI+ + + +L+ I++ +LE++WSG+G+E+WWRNEQFWVIGGTSAHL AV QGLLKV+AGI+ +FT+T+KA+ DDD FAELY+ KWTSL IPP V+ +N++ +V GVS + + + L G FF+ WV+AH YPF KG Sbjct: 779 RLKFLQRMAYLNVGIYPFTSLFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWRNEQFWVIGGTSAHLAAVLQGLLKVVAGIEISFTLTAKAAAEDDDDPFAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKG 968
BLAST of FC925244 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.076e-53 Identity = 92/190 (48.42%), Postives = 135/190 (71.05%), Query Frame = 3 Query: 150 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGD--FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKG 713 RLK L+RLAY+N +YP TS+ LI YC LPAF L + +FI+ +S ++ +++ I + +LE++WSG+G+E+WWRNEQ+W+I GTS+HL+AV QG+LKV+AGI+ +FT+T+K+ DD + +A+LY+ KW+SL+IPP + +VN++ IV I W L G FF+ WV+AHLYPF KG Sbjct: 871 RLKFLQRLAYLNVGIYPFTSLFLILYCFLPAFSLFSGQFIVRTLSISFLVYLLMITICLIGLAVLEVKWSGIGLEEWWRNEQWWLISGTSSHLYAVVQGVLKVIAGIEISFTLTTKSGGDDNEDIYADLYIVKWSSLMIPPIVIAMVNIIAIVVAFIRTIYQAVPQWSKLIGGAFFSFWVLAHLYPFAKG 1060
BLAST of FC925244 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.087e-53 Identity = 92/191 (48.17%), Postives = 135/191 (70.68%), Query Frame = 3 Query: 150 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS---DDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKG 713 R+K L+R+AY N +YP TS+ LI YC LPA L + +FI+ + ++ + + +++ +LEI+WSG+ + +WWRNEQFWVIGGTSAH AV QGLLKV+AG+D +FT+TSK+S D D +FA+LYV KW+ L++PP T+++VN++ I G++ + S + W L G +FF+ WV+ HLYPF KG Sbjct: 946 RMKFLQRVAYFNVGMYPFTSLFLIVYCILPAISLFSGQFIVQSLDITFLIYLLSITLTLCMLSLLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSSAPEDGDDEFADLYVVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKG 1136
BLAST of FC925244 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 204.912 bits (520), Expect = 3.460e-52 Identity = 94/190 (49.47%), Postives = 135/190 (71.05%), Query Frame = 3 Query: 150 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGD--FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKG 713 +L LL+R++Y+N +YP TSI L+ YC +PA L + FI+ ++ + + + I++ A GILE++WSG+ +EDWWRNEQFW+I GTSAHL+AV QGLLKV+AGI+ +FT+T+KA+ DD + +A+LY+ KW+SLLIPP T+ +VN++ I + I S WG G FF+ WV+AHL PF KG Sbjct: 909 KLMLLQRISYLNVGIYPFTSIFLLVYCFIPALSLFSGFFIVQKLDIAFLCYLLTMTITLVALGILEVKWSGIELEDWWRNEQFWLISGTSAHLYAVVQGLLKVMAGIEISFTLTAKAAADDNEDIYADLYIVKWSSLLIPPITIGMVNIIAIAFAFARTIYSDNPRWGKFIGGGFFSFWVLAHLNPFAKG 1098
BLAST of FC925244 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.929e-51 Identity = 93/200 (46.50%), Postives = 131/200 (65.50%), Query Frame = 3 Query: 150 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGD------------FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKG 713 R+KLL+R+AY N +YP TS+ L+AYC LPA L + KFI+ +S + +++ +++ +LEI+WSG+ + +WWRNEQFWVIGGTSAH AV QGLLKV+AG+D +FT+TSK + GD FAELY +W+ L++PP T+++VN V I + + S + W L G FF+ WV+ HLYPF KG Sbjct: 968 RMKLLQRVAYFNAGMYPFTSVFLLAYCLLPAVSLFSGKFIVQRLSATFLAFLLVITLTLCLLALLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKPGNGGGDGGVGGEGNDDEAFAELYEVRWSYLMVPPVTIMMVNAVAIAVAAARTLYSEFPQWSKLLGGAFFSFWVLCHLYPFAKG 1167
BLAST of FC925244 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.318e-43 Identity = 94/209 (44.98%), Postives = 128/209 (61.24%), Query Frame = 3 Query: 129 LWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIP-EISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS--------DDDGD----FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSG-YQSWGPLFGKLFFAIWVIAHLYPFLKG 713 +W G RL LL+RL Y+ YPL S+PL YC LPA CLLT K P ++S + + ILL S+ A+ LE+RWS V + WWR+E+ W++ TSA L AVFQG+L GID F+ + AS +DDG+ A +WT+LL+ PT+V++ NL G+VA V++ ++ G YQSWG L KL A WV+AHL FL+G Sbjct: 606 VWAGR--RLGLLQRLGYVARASYPLASLPLTVYCALPAVCLLTGKSTFPSDVSYYDGVLLILLLFSVAASVALELRWSRVPLRAWWRDEKLWMVTATSASLAAVFQGILSACTGIDVAFSTETAASPPKRPAAGNDDGEEEAALASEITMRWTNLLVAPTSVVVANLAGVVAAVAYGVDHGYYQSWGALGAKLALAGWVVAHLQGFLRG 812
BLAST of FC925244 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.253e-34 Identity = 70/187 (37.43%), Postives = 114/187 (60.96%), Query Frame = 3 Query: 162 LERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK--ASDDDGD-FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKG 713 L+R+AYIN YP T++ LI Y T+PA +T FI+ + ++ ++ ++ +LE++W+GV + +W+RN QFW+ SA+L AV Q + KV+ D +F +TSK A D+ D +A+LYV +WT L+I P +++VN++G + ++ + W + G +FF WV+ HLYPF KG Sbjct: 702 LQRVAYINITTYPFTALFLIFYTTVPALSFVTGHFIVQRPTTMFYVYLAIVLGTLLILAVLEVKWAGVTVFEWFRNGQFWMTASCSAYLAAVLQVVTKVVFRRDISFKLTSKLPAGDEKKDPYADLYVVRWTWLMITPIIIILVNIIGSAVAFAKVLDGEWTHWLKVAGGVFFNFWVLFHLYPFAKG 888 The following BLAST results are available for this feature:
BLAST of FC925244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925244 ID=FC925244; Name=FC925244; organism=Citrus clementina; type=EST; length=715bpback to top |