FC925249

Overview
NameFC925249
Unique NameFC925249
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925249 vs. ExPASy Swiss-Prot
Match: BPPS_SALOF ((+)-bornyl diphosphate synthase, chloroplastic OS=Salvia officinalis PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.402e-56
Identity = 115/236 (48.73%), Postives = 157/236 (66.53%), Query Frame = 2
Query:   20 EKLSFARNRLVASFLWSMGIAFEP-QFAYCRRVLTISIALITVIDDIYDVYGTLDELEIFTDAVARWDINYALKHLPGYMKMCFLALYNFVNEFAYYVLKQQDFDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKE-LEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWK 721
            EKL F R+RLV SF W++G+ FEP Q  Y R++    I L TVIDDIYDVYGTLDELE+FTD   RWD   ++  LP YM++C+  ++N++++ AY +LK+  F  L  ++ + + L++AY  EAKWYHS YTP L+EYL    +S+  P II+ +Y +  N       ++ L    DI+  +  I RL DDLGTS  E+ RGDVPK+IQCYM ET ASEE A EH+K ++R+ WK
Sbjct:  308 EKLPFVRDRLVESFFWAVGM-FEPHQHGYQRKMAATIIVLATVIDDIYDVYGTLDELELFTDTFKRWDTE-SITRLPYYMQLCYWGVHNYISDAAYDILKEHGFFCLQYLRKSVVDLVEAYFHEAKWYHSGYTPSLDEYLNIAKISVASPAIISPTYFTFANASHDTAVIDSLYQYHDILCLAGIILRLPDDLGTSYFELARGDVPKTIQCYMKETNASEEEAVEHVKFLIREAWK 541          
BLAST of FC925249 vs. ExPASy Swiss-Prot
Match: OCIS_ARATH ((E)-beta-ocimene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.643e-55
Identity = 106/238 (44.54%), Postives = 157/238 (65.97%), Query Frame = 2
Query:    8 TGLGEKLSFARNRLVASFLWSMGIAFEPQFAYCRRVLTISIALITVIDDIYDVYGTLDELEIFTDAVARWDINYALKHLPGYMKMCFLALYNFVNEFAYYVLKQQDFDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLES-NPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMW 718
            TGL + L F R+R+   +  S+G+ +EP+FAY R++LT    LIT IDDIYD+YGTL+EL++FT  V +WD+N  L+ LP YMK+CFL L N +N+  Y+VL+ + F+++  +K +W  +   +L EAKWY S Y P  EEY++NG +S + P I+   +      +  + L+ L S N  +V  S+ I RL +DL TSS+E+ RGD  KS+QC+MHETGASE  +R +I+ ++   W
Sbjct:  273 TGLTKHLDFVRDRITEGYFSSVGVMYEPEFAYHRQMLTKVFMLITTIDDIYDIYGTLEELQLFTTIVEKWDVN-RLEELPNYMKLCFLCLVNEINQIGYFVLRDKGFNVIPYLKESWADMCTTFLKEAKWYKSGYKPNFEEYMQNGWISSSVPTILLHLFCL----LSDQTLDILGSYNHSVVRSSATILRLANDLATSSEELARGDTMKSVQCHMHETGASEAESRAYIQGIIGVAW 505          
BLAST of FC925249 vs. ExPASy Swiss-Prot
Match: LINS_ARATH (Linalool synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS14 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.321e-43
Identity = 94/241 (39.00%), Postives = 147/241 (61.00%), Query Frame = 2
Query:    5 DTGLGEKLSFARNRLVASFLWSMGIAFEPQFAYCRRVLTISIALITVIDDIYDVYGTLDELEIFTDAVARWDINYALKHLPGYMKMCFLALYNFVNEFAYYVLKQQDFDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHE-TGASEEVAREHIKDMMRQMWKK 724
            + GL + +  AR++ +    WSM I  +P     R  LT  I+L+ VIDDI+DVYG L+EL IFT  V RWD +  LK LP YM++CF AL     E +  + K   ++   +++ +W  L +A+LVEAKW++S Y P  EEY++NG+VS    L++  +Y+     + K+++E +ESNP IV  ++ I RL DDLG++ DE Q G     ++CY++E  G++ + AR H+   + + WK+
Sbjct:  283 ELGLEKDVEKARSQPLKWHTWSMKILQDPTLTEQRLDLTKPISLVYVIDDIFDVYGELEELTIFTRVVERWD-HKGLKTLPKYMRVCFEALDMITTEISMKIYKSHGWNPTYALRQSWASLCKAFLVEAKWFNSGYLPTTEEYMKNGVVSSGVHLVMLHAYILLGEELTKEKVELIESNPGIVSSAATILRLWDDLGSAKDENQDGTDGSYVECYLNEYKGSTVDEARTHVAQKISRAWKR 522          
BLAST of FC925249 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.541e-38
Identity = 87/241 (36.10%), Postives = 131/241 (54.36%), Query Frame = 2
Query:    2 KDTGLGEKLSFARNRLVASFLWSMGIAFEPQFAYCRRVLTISIALITVIDDIYDVYGTLDELEIFTDAVARWDINYALKHLPGYMKMCFLALYNFVNEFAYYVLKQQDFDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKE-LEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWK 721
            KD     KL FAR+R+V  + W MG+ FEPQ++  R++LT  IA+ +++DD YD Y T DEL  +T+A+ RWDI   +  LP YMK+ + AL N   E    +  Q     +   K A + L+QAYL+EAKW H  Y P  EE+ +N L + +G  ++ I+   G   +I  E  ++  S+P I+  S+ I R  DD+       +R D   +I+CYM + G + + A       +   WK
Sbjct:  259 KDLDFTRKLPFARDRVVEGYFWIMGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYDELIPYTNAIERWDIK-CMNQLPNYMKISYKALLNVYEEMEQLLANQGRQYRVEYAKKAMIRLVQAYLLEAKWTHQNYKPTFEEFRDNALPT-SGYAMLAITAFVGMGEVITPETFKWAASDPKIIKASTIICRFMDDIAEHKFNHRREDDCSAIECYMKQYGVTAQEAYNEFNKHIESSWK 497          
BLAST of FC925249 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 153.68 bits (387), Expect = 9.445e-37
Identity = 81/240 (33.75%), Postives = 131/240 (54.58%), Query Frame = 2
Query:    2 KDTGLGEKLSFARNRLVASFLWSMGIAFEPQFAYCRRVLTISIALITVIDDIYDVYGTLDELEIFTDAVARWDINYALKHLPGYMKMCFLALYNFVNEFAYYVLKQQDFDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWK 721
            KD      L +AR+R+V  + W++G+ FEPQ++  R +L  +I++I+++DD +D YGT+ ELE +TDA+ RWDIN  +  LP YMK+ + A+ +   ++   +       ++         +++ Y VE+ W+   YTP + EYL N L + T   + T SYL G     +++ E+L  NP I+  S  I R+ DD  T   E  RG +   I+C M + G S + A    ++M    WK
Sbjct:  252 KDLDFVTTLPYARDRVVECYFWALGVYFEPQYSQARVMLVKTISMISIVDDTFDAYGTVKELEAYTDAIQRWDIN-EIDRLPDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPVSEYLSNALATTTYYYLATTSYL-GMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWK 489          
BLAST of FC925249 vs. ExPASy Swiss-Prot
Match: TPSD1_ABIGR (Alpha-bisabolene synthase OS=Abies grandis GN=ag1 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.122e-36
Identity = 86/245 (35.10%), Postives = 141/245 (57.55%), Query Frame = 2
Query:    2 KDTGLGEKLSFARNRLVASFLWSMGIAFEPQFAYCRRVLTISIALITVIDDIYDVYGTLDELEIFTDAVARWDINYALKHLPGYMKMCFLALYNFVNEFAYYVLKQQDFDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKE-LEFLE--SNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHE-TGASEEVAREHIKDMMRQMWKK 724
            +D+GL    +FAR R +  +       +EPQ+A CR + T    L TV+DD+YD YGTLDEL++FT+AV RWD+++  ++LP YMK+C+   Y+ V+E A+   K+Q  +++   +  W   +  Y  EA+W  ++Y P L+EY++NG+ SI   +++    L     ++ +E LE ++      +   +S I RL DD  T   E  RG++  SI+CYM +    +EE A +HI  ++    K+
Sbjct:  518 RDSGL-PLFTFARERPLEFYFLVAAGTYEPQYAKCRFLFTKVACLQTVLDDMYDTYGTLDELKLFTEAVRRWDLSFT-ENLPDYMKLCYQIYYDIVHEVAWEAEKEQGRELVSFFRKGWEDYLLGYYEEAEWLAAEYVPTLDEYIKNGITSIGQRILLLSGVLIMDGQLLSQEALEKVDYPGRRVLTELNSLISRLADDTKTYKAEKARGELASSIECYMKDHPECTEEEALDHIYSILEPAVKE 760          
BLAST of FC925249 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.326e-35
Identity = 79/241 (32.78%), Postives = 132/241 (54.77%), Query Frame = 2
Query:    2 KDTGLGEKLSFARNRLVASFLWSMGIAFEPQFAYCRRVLTISIALITVIDDIYDVYGTLDELEIFTDAVARWDINYALKHLPGYMKMCFLALYNFVNEFAYYVLKQQDFDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKK 724
            KD  L   + +AR+R+   F W++ + FEP +A+ R ++   + LI++IDD  D Y T++E  I  +AVARWD++  L+ LP YMK+ +  L N  +EF   +  +     +   + A+  L++ Y +EA W      P  ++YL NG ++   PL+ T S++         E ++LE+NP + + S    RL +DL +   E QRG V   I CYM++ G S++ A + ++ M    WK+
Sbjct:  306 KDLNLASDIPYARDRMAEIFFWAVAMYFEPDYAHTRMIIAKVVLLISLIDDTIDAYATMEETHILAEAVARWDMS-CLEKLPDYMKVIYKLLLNTFSEFEKELTAEGKSYSVKYGREAFQELVRGYYLEAVWRDEGKIPSFDDYLYNGSMTTGLPLVSTASFMGVQEITGLNEFQWLETNPKLSYASGAFIRLVNDLTSHVTEQQRGHVASCIDCYMNQHGVSKDEAVKILQKMATDCWKE 545          
BLAST of FC925249 vs. ExPASy Swiss-Prot
Match: TPSD1_GINBI (Levopimaradiene synthase, chloroplastic OS=Ginkgo biloba GN=LPS PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.276e-33
Identity = 82/232 (35.34%), Postives = 125/232 (53.88%), Query Frame = 2
Query:    2 KDTGLGEKLSFARNRLVASFLWSMGIAFEPQFAYCRRVLTISIALITVIDDIYDVYGTLDELEIFTDAVARWDINYALKHLPGYMKMCFLALYNFVNEFAYYVLKQQDFDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHET-GASEEVAREHI 694
            +++G  + L+F R R V  +       FEP+FA CR     +  L  ++DD+YD +G+LD+L++F++AV RWDI+         +K+CFL LYN VN F    LK+Q  D+L  ++  W GL+ +Y  EA+W  +KY P   EY+EN  VSI    ++  S       +    L+ ++     +H  S   RL +D  T   E  RG++  S+QCYM E    +EE A  H+
Sbjct:  576 RESGFND-LTFTRQRPVEMYFSVAVSMFEPEFAACRIAYAKTSCLAVILDDLYDTHGSLDDLKLFSEAVRRWDISVLDSVRDNQLKVCFLGLYNTVNGFGKDGLKEQGRDVLGYLRKVWEGLLASYTKEAEWSAAKYVPTFNEYVENAKVSIALATVVLNSIFFTGELLPDYILQQVDLRSKFLHLVSLTGRLINDTKTYQAERNRGELVSSVQCYMRENPECTEEEALSHV 806          
BLAST of FC925249 vs. ExPASy Swiss-Prot
Match: TPSD4_ABIGR (Delta-selinene synthase OS=Abies grandis GN=ag4 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.667e-33
Identity = 84/245 (34.29%), Postives = 135/245 (55.10%), Query Frame = 2
Query:    2 KDTGLGEKLSFARNRLVASFLWSMGIAFEPQFAYCRRVLTISIALITVIDDIYDVYGTLDELEIFTDAVARWDINYALKHLPGYMKMCFLALYNFVNEFAYYVLKQQDFDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNPDIVHWSSKIF-------RLQDDLGTSSDEIQRGDVPKSIQCYMHETGASE-EVAREHIKDMMRQ 712
            +D+G+ + L+F R R V  + W +   FEP+F+  R     +  L TV+DD+YD + TL E++I T+ V RWD++     LP Y+K+ F   +N VNE    ++K+Q  DM   +K  W   I++YL EA+W  + + P   EY++NG+ S +G  I+ +      NP++  +    ++  + +H  SKI        R+ DDL    DE +RG++  S+QCYM E   S  E A  HIK ++ +
Sbjct:  283 RDSGISQ-LNFYRKRHVEYYSWVVMCIFEPEFSESRIAFAKTAILCTVLDDLYDTHATLHEIKIMTEGVRRWDLSLT-DDLPDYIKIAFQFFFNTVNELIVEIVKRQGRDMTTIVKDCWKRYIESYLQEAEWIATGHIPTFNEYIKNGMAS-SGMCILNL------NPLLLLDKLLPDNILEQIHSPSKILDLLELTGRIADDLKDFEDEKERGEMASSLQCYMKENPESTVENALNHIKGILNR 518          
BLAST of FC925249 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.667e-33
Identity = 78/240 (32.50%), Postives = 127/240 (52.92%), Query Frame = 2
Query:    2 KDTGLGEKLSFARNRLVASFLWSMGIAFEPQFAYCRRVLTISIALITVIDDIYDVYGTLDELEIFTDAVARWDINYALKHLPGYMKMCFLALYNFVNEFAYYVLKQQDFDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWK 721
            KD     KL +AR+R+V  + W  G+ FEPQ++  R++LT  IA+ +++DD YD Y T +EL  +T+A+ RWDI   +  +P YMK  + AL +   E    V +      +   K+A + L Q+YLVEAKW    Y P  EE+  N L +    ++   S++   + +  +  ++  S+P I+  S+ I R  DD+     + +R D   +I+CYM E G + + A +     +   WK
Sbjct:  258 KDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYEELIPYTNAIERWDIK-CIDEIPEYMKPSYKALLDVYEEMVQLVAEHGRQYRVEYAKNAMIRLAQSYLVEAKWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAASDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWK 496          
The following BLAST results are available for this feature:
BLAST of FC925249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
BPPS_SALOF1.402e-5648.73(+)-bornyl diphosphate synthase, chloroplastic OS=... [more]
OCIS_ARATH2.643e-5544.54(E)-beta-ocimene synthase, chloroplastic OS=Arabid... [more]
LINS_ARATH2.321e-4339.00Linalool synthase, chloroplastic OS=Arabidopsis th... [more]
DCS3_GOSAR6.541e-3836.10(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
5EAS_TOBAC9.445e-3733.75Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
TPSD1_ABIGR6.122e-3635.10Alpha-bisabolene synthase OS=Abies grandis GN=ag1 ... [more]
CASS_RICCO2.326e-3532.78Casbene synthase, chloroplastic OS=Ricinus communi... [more]
TPSD1_GINBI1.276e-3335.34Levopimaradiene synthase, chloroplastic OS=Ginkgo ... [more]
TPSD4_ABIGR1.667e-3334.29Delta-selinene synthase OS=Abies grandis GN=ag4 PE... [more]
DCS1_GOSAR1.667e-3332.50(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YG05FM1 TF Citrus clementina cDNA clone KN0AAP8YG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925249 ID=FC925249; Name=FC925249; organism=Citrus clementina; type=EST; length=724bp
GAAGGATACAGGTCTTGGAGAGAAATTGAGCTTTGCGAGGAACAGGTTGG
TAGCGTCCTTCTTATGGAGCATGGGGATCGCGTTTGAGCCTCAATTCGCC
TACTGCAGGAGAGTGCTCACAATCTCGATAGCCCTAATTACAGTGATTGA
TGACATTTATGATGTCTATGGAACATTGGATGAACTTGAGATATTCACTG
ATGCTGTTGCGAGGTGGGACATCAATTATGCTTTGAAGCACCTTCCGGGC
TATATGAAAATGTGTTTTCTTGCCCTTTACAACTTTGTTAATGAATTTGC
TTATTACGTTCTCAAACAACAGGATTTTGATATGCTTCTGAGCATAAAAC
ATGCATGGCTTGGCTTAATACAAGCCTACTTGGTGGAGGCGAAATGGTAC
CATAGCAAGTACACACCGAAACTGGAAGAATACTTGGAAAATGGATTGGT
ATCAATAACGGGCCCTTTAATTATAACGATTTCATATCTTTCTGGTACAA
ATCCAATCATTAAGAAGGAACTGGAATTTCTAGAAAGTAATCCAGATATA
GTTCACTGGTCATCCAAGATTTTCCGTCTGCAAGATGATTTGGGAACTTC
ATCGGACGAGATACAGAGAGGGGATGTTCCGAAATCAATCCAGTGTTACA
TGCATGAAACTGGTGCCTCGGAGGAAGTTGCTCGTGAACACATCAAGGAT
ATGATGAGACAGATGTGGAAGAAG
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